RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Phxr4P15974 95 aa6.98□□□□□ -1.29
Ttc39b-201ENSMUST00000030205 H2al1bA0A087WP11 105 aa6.96□□□□□ -1.3
Ttc39b-201ENSMUST00000030205 Gm10272F7CZ33 110 aa6.95□□□□□ -1.3
Ttc39b-201ENSMUST00000030205 Brk1Q91VR8 75 aa6.95□□□□□ -1.3
Ttc39b-201ENSMUST00000030205 Lce1fB9EJP6 147 aa6.93□□□□□ -1.3
Ttc39b-201ENSMUST00000030205 Lce1cQ9D1C5 147 aa6.93□□□□□ -1.3
Ttc39b-201ENSMUST00000030205 Krtap7-1Q9D3I6 87 aa6.81□□□□□ -1.32
Ttc39b-201ENSMUST00000030205 Ndufb1P0DN34 57 aa6.78□□□□□ -1.32
Ttc39b-201ENSMUST00000030205 Gm10153A0A1B0GRL1 320 aa6.76□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Gm40460A0A1B0GR10 244 aa6.74□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Gm7579A0A1B0GRJ4 243 aa6.74□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Krtap5-5Q2TA51 241 aa6.74□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Krtap5-4Q62220 223 aa6.74□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Gm39115A0A1B0GSH7 232 aa6.72□□□□□ -1.33
Ttc39b-201ENSMUST00000030205 Krtap19-4Q925H7 84 aa6.71□□□□□ -1.34
Ttc39b-201ENSMUST00000030205 Hmcn1D3YXG0 5634 aa6.7□□□□□ -1.34
Ttc39b-201ENSMUST00000030205 Gm11938Q9D3H4 131 aa6.62□□□□□ -1.35
Ttc39b-201ENSMUST00000030205 Mt1P02802 61 aaKnown RBP6.59□□□□□ -1.35
Ttc39b-201ENSMUST00000030205 Pcp4P63054 62 aa6.59□□□□□ -1.35
Ttc39b-201ENSMUST00000030205 DstQ91ZU6 7393 aaKnown RBP6.57□□□□□ -1.36
Ttc39b-201ENSMUST00000030205 Gm3880A0A1B0GSB3 72 aa6.51□□□□□ -1.37
Ttc39b-201ENSMUST00000030205 Krtap4-16Q91W93 202 aa6.48□□□□□ -1.37
Ttc39b-201ENSMUST00000030205 NebE9Q1W3 7152 aa6.48□□□□□ -1.37
Ttc39b-201ENSMUST00000030205 Sox16Q62247 57 aa6.43□□□□□ -1.38
Ttc39b-201ENSMUST00000030205 4933415A04RikQ9D443 101 aa6.42□□□□□ -1.38
Ttc39b-201ENSMUST00000030205 Gm45618A0A1B0GSA0 219 aa6.35□□□□□ -1.39
Ttc39b-201ENSMUST00000030205 H2al1kJ3QP08 105 aa6.3□□□□□ -1.4
Ttc39b-201ENSMUST00000030205 H2al1mQ9DAD9 105 aa6.28□□□□□ -1.4
Ttc39b-201ENSMUST00000030205 Sprr2fO70557 76 aa6.27□□□□□ -1.41
Ttc39b-201ENSMUST00000030205 Lce3cQ91V05 98 aa6.26□□□□□ -1.41
Ttc39b-201ENSMUST00000030205 Gm10337F7DEP7 55 aa6.2□□□□□ -1.42
Ttc39b-201ENSMUST00000030205 Lce3dE9Q8V1 98 aa6.16□□□□□ -1.42
Ttc39b-201ENSMUST00000030205 Mt3P28184 68 aa6.14□□□□□ -1.43
Ttc39b-201ENSMUST00000030205 Gm3646F6S692 53 aa6.13□□□□□ -1.43
Ttc39b-201ENSMUST00000030205 Gm12216A0A1W2P827 62 aa6.12□□□□□ -1.43
Ttc39b-201ENSMUST00000030205 Ndufs5Q99LY9 106 aa6.1□□□□□ -1.43
Ttc39b-201ENSMUST00000030205 AhnakE9Q616 5656 aaKnown RBP6.04□□□□□ -1.44
Ttc39b-201ENSMUST00000030205 Tnp1P10856 55 aa5.94□□□□□ -1.46
Ttc39b-201ENSMUST00000030205 Romo1P60603 79 aa5.93□□□□□ -1.46
Ttc39b-201ENSMUST00000030205 Lce3eF8VQJ0 98 aa5.91□□□□□ -1.46
Ttc39b-201ENSMUST00000030205 Lce3fQ6PAI4 98 aa5.91□□□□□ -1.46
Ttc39b-201ENSMUST00000030205 ObscnA2AAJ9 8891 aaKnown RBP5.89□□□□□ -1.47
Ttc39b-201ENSMUST00000030205 A0A1Y7VLE6 161 aa5.82□□□□□ -1.48
Ttc39b-201ENSMUST00000030205 Gm10100J3QK64 120 aa5.79□□□□□ -1.48
Ttc39b-201ENSMUST00000030205 4933428G20RikQ9D3X4 101 aa5.7□□□□□ -1.5
Ttc39b-201ENSMUST00000030205 SvipQ3UZP4 77 aa5.67□□□□□ -1.5
Ttc39b-201ENSMUST00000030205 Krtap31-2Q8CAY5 177 aa5.67□□□□□ -1.5
Ttc39b-201ENSMUST00000030205 Lce3aQ497I5 98 aa5.65□□□□□ -1.5
Ttc39b-201ENSMUST00000030205 Gm40193A0A1B0GT39 78 aa5.46□□□□□ -1.54
Ttc39b-201ENSMUST00000030205 Sprr2eO70556 76 aa5.39□□□□□ -1.55
Ttc39b-201ENSMUST00000030205 Krtap31-1Q9D644 177 aa5.36□□□□□ -1.55
Ttc39b-201ENSMUST00000030205 Sprr2dO70555 85 aa5.3□□□□□ -1.56
Ttc39b-201ENSMUST00000030205 Gm10024A0A0A0MQA4 119 aa5.19□□□□□ -1.58
Ttc39b-201ENSMUST00000030205 Sprr2hO70559 108 aa5.04□□□□□ -1.6
Ttc39b-201ENSMUST00000030205 A0A1Y7VJ07 166 aa5.01□□□□□ -1.61
Ttc39b-201ENSMUST00000030205 Mp68P56379 58 aa4.95□□□□□ -1.62
Ttc39b-201ENSMUST00000030205 Gm29735A0A1B0GT06 219 aa4.92□□□□□ -1.62
Ttc39b-201ENSMUST00000030205 Muc16A0A140LJ72 8478 aa4.91□□□□□ -1.62
Ttc39b-201ENSMUST00000030205 Gm10142J3KMP7 120 aa4.84□□□□□ -1.63
Ttc39b-201ENSMUST00000030205 1110025L11RikO09048 78 aa4.63□□□□□ -1.67
Ttc39b-201ENSMUST00000030205 Krtap6-5Q925H3 78 aa4.63□□□□□ -1.67
Ttc39b-201ENSMUST00000030205 Gm11567Q9D141 195 aa4.61□□□□□ -1.67
Ttc39b-201ENSMUST00000030205 Gm20538F6Z9R1 75 aa4.47□□□□□ -1.69
Ttc39b-201ENSMUST00000030205 Krtap28-10A0A1Y7VP58 119 aa4.33□□□□□ -1.72
Ttc39b-201ENSMUST00000030205 Gm10229O08631 77 aa4.18□□□□□ -1.74
Ttc39b-201ENSMUST00000030205 A030003K21RikA0A1Y7VIM3 128 aa4.13□□□□□ -1.75
Ttc39b-201ENSMUST00000030205 Krtap28-13A0A087WQP5 138 aa4.09□□□□□ -1.75
Ttc39b-201ENSMUST00000030205 Ndufaf8A2AMZ4 74 aa4.08□□□□□ -1.76
Ttc39b-201ENSMUST00000030205 A030005K14RikA0A1Y7VNY1 122 aa4.06□□□□□ -1.76
Ttc39b-201ENSMUST00000030205 Gm7544A0A1Y7VJ58 118 aa4.05□□□□□ -1.76
Ttc39b-201ENSMUST00000030205 Krtap5-1Q64507 230 aa3.97□□□□□ -1.77
Ttc39b-201ENSMUST00000030205 A030014E15RikA0A1Y7VJV2 120 aa3.93□□□□□ -1.78
Ttc39b-201ENSMUST00000030205 Sprr2bO70554 98 aa3.91□□□□□ -1.78
Ttc39b-201ENSMUST00000030205 Krtap6-2O08884 159 aa3.79□□□□□ -1.8
Ttc39b-201ENSMUST00000030205 Krtap21-1Q925H4 128 aa3.72□□□□□ -1.81
Ttc39b-201ENSMUST00000030205 Gm6217A0A1Y7VJK9 128 aa3.51□□□□□ -1.85
Ttc39b-201ENSMUST00000030205 A0A286YCP9 139 aa3.47□□□□□ -1.85
Ttc39b-201ENSMUST00000030205 Gm9112A2AI92 75 aa3.28□□□□□ -1.88
Ttc39b-201ENSMUST00000030205 Phgr1Q8K0G7 91 aa3.01□□□□□ -1.93
Ttc39b-201ENSMUST00000030205 Gm4559A4IF42 199 aa2.87□□□□□ -1.95
Retrieved 80 of 22,080 RNA–protein pairs in 11 ms