RNA–Protein interactions for RNA: ENSMUST00000026926.4

Sec61a2-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 5 BASIC

Gene Sec61a2, Length 756 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-201ENSMUST00000026926 Lce1fB9EJP6 147 aa7.2□□□□□ -1.26
Sec61a2-201ENSMUST00000026926 Lce1cQ9D1C5 147 aa7.2□□□□□ -1.26
Sec61a2-201ENSMUST00000026926 Krtap7-1Q9D3I6 87 aa7.12□□□□□ -1.27
Sec61a2-201ENSMUST00000026926 Tmem258P61166 79 aa7.04□□□□□ -1.28
Sec61a2-201ENSMUST00000026926 Hmcn1D3YXG0 5634 aa6.99□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Krtap19-4Q925H7 84 aa6.99□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Gm10153A0A1B0GRL1 320 aa6.98□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Gm40460A0A1B0GR10 244 aa6.97□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Gm7579A0A1B0GRJ4 243 aa6.97□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Krtap5-5Q2TA51 241 aa6.97□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Krtap5-4Q62220 223 aa6.97□□□□□ -1.29
Sec61a2-201ENSMUST00000026926 Gm39115A0A1B0GSH7 232 aa6.95□□□□□ -1.3
Sec61a2-201ENSMUST00000026926 Gm19935A0A1B0GSF9 52 aa6.91□□□□□ -1.3
Sec61a2-201ENSMUST00000026926 Gm11938Q9D3H4 131 aa6.9□□□□□ -1.3
Sec61a2-201ENSMUST00000026926 Gm3880A0A1B0GSB3 72 aa6.89□□□□□ -1.31
Sec61a2-201ENSMUST00000026926 Mt1P02802 61 aaKnown RBP6.85□□□□□ -1.31
Sec61a2-201ENSMUST00000026926 Brk1Q91VR8 75 aa6.8□□□□□ -1.32
Sec61a2-201ENSMUST00000026926 DstQ91ZU6 7393 aaKnown RBP6.79□□□□□ -1.32
Sec61a2-201ENSMUST00000026926 H2al1mQ9DAD9 105 aa6.71□□□□□ -1.34
Sec61a2-201ENSMUST00000026926 Krtap4-16Q91W93 202 aa6.69□□□□□ -1.34
Sec61a2-201ENSMUST00000026926 NebE9Q1W3 7152 aa6.66□□□□□ -1.34
Sec61a2-201ENSMUST00000026926 H2al1kJ3QP08 105 aa6.66□□□□□ -1.34
Sec61a2-201ENSMUST00000026926 Gm45618A0A1B0GSA0 219 aa6.56□□□□□ -1.36
Sec61a2-201ENSMUST00000026926 Gm12216A0A1W2P827 62 aa6.55□□□□□ -1.36
Sec61a2-201ENSMUST00000026926 Lce3cQ91V05 98 aa6.55□□□□□ -1.36
Sec61a2-201ENSMUST00000026926 SmcpP15265 143 aa6.53□□□□□ -1.36
Sec61a2-201ENSMUST00000026926 Sprr2fO70557 76 aa6.52□□□□□ -1.37
Sec61a2-201ENSMUST00000026926 Lce3dE9Q8V1 98 aa6.44□□□□□ -1.38
Sec61a2-201ENSMUST00000026926 Mt3P28184 68 aa6.41□□□□□ -1.38
Sec61a2-201ENSMUST00000026926 Romo1P60603 79 aa6.33□□□□□ -1.4
Sec61a2-201ENSMUST00000026926 Tnp1P10856 55 aa6.32□□□□□ -1.4
Sec61a2-201ENSMUST00000026926 Rps28P62858 69 aaKnown RBP6.31□□□□□ -1.4
Sec61a2-201ENSMUST00000026926 AhnakE9Q616 5656 aaKnown RBP6.29□□□□□ -1.4
Sec61a2-201ENSMUST00000026926 4933415A04RikQ9D443 101 aa6.29□□□□□ -1.4
Sec61a2-201ENSMUST00000026926 Ndufs5Q99LY9 106 aa6.24□□□□□ -1.41
Sec61a2-201ENSMUST00000026926 Lce3eF8VQJ0 98 aa6.18□□□□□ -1.42
Sec61a2-201ENSMUST00000026926 Lce3fQ6PAI4 98 aa6.18□□□□□ -1.42
Sec61a2-201ENSMUST00000026926 ObscnA2AAJ9 8891 aaKnown RBP6.14□□□□□ -1.43
Sec61a2-201ENSMUST00000026926 Gm10100J3QK64 120 aa6.03□□□□□ -1.44
Sec61a2-201ENSMUST00000026926 4933428G20RikQ9D3X4 101 aa6□□□□□ -1.45
Sec61a2-201ENSMUST00000026926 A0A1Y7VLE6 161 aa5.99□□□□□ -1.45
Sec61a2-201ENSMUST00000026926 Lce3aQ497I5 98 aa5.91□□□□□ -1.46
Sec61a2-201ENSMUST00000026926 Gm40193A0A1B0GT39 78 aa5.86□□□□□ -1.47
Sec61a2-201ENSMUST00000026926 Sox16Q62247 57 aa5.81□□□□□ -1.48
Sec61a2-201ENSMUST00000026926 Gm3646F6S692 53 aa5.68□□□□□ -1.5
Sec61a2-201ENSMUST00000026926 Sprr2eO70556 76 aa5.63□□□□□ -1.51
Sec61a2-201ENSMUST00000026926 Sprr2dO70555 85 aa5.58□□□□□ -1.52
Sec61a2-201ENSMUST00000026926 Krtap28-13A0A087WQP5 138 aa5.53□□□□□ -1.52
Sec61a2-201ENSMUST00000026926 A030005K14RikA0A1Y7VNY1 122 aa5.5□□□□□ -1.53
Sec61a2-201ENSMUST00000026926 Krtap28-10A0A1Y7VP58 119 aa5.46□□□□□ -1.54
Sec61a2-201ENSMUST00000026926 Gm10024A0A0A0MQA4 119 aa5.43□□□□□ -1.54
Sec61a2-201ENSMUST00000026926 Sprr2hO70559 108 aa5.25□□□□□ -1.57
Sec61a2-201ENSMUST00000026926 A0A1Y7VJ07 166 aa5.13□□□□□ -1.59
Sec61a2-201ENSMUST00000026926 Gm29735A0A1B0GT06 219 aa5.11□□□□□ -1.59
Sec61a2-201ENSMUST00000026926 Muc16A0A140LJ72 8478 aa5.09□□□□□ -1.59
Sec61a2-201ENSMUST00000026926 Gm10142J3KMP7 120 aa5.06□□□□□ -1.6
Sec61a2-201ENSMUST00000026926 A030014E15RikA0A1Y7VJV2 120 aa5.04□□□□□ -1.6
Sec61a2-201ENSMUST00000026926 Krtap31-2Q8CAY5 177 aa4.98□□□□□ -1.61
Sec61a2-201ENSMUST00000026926 Gm7544A0A1Y7VJ58 118 aa4.91□□□□□ -1.62
Sec61a2-201ENSMUST00000026926 Gm20538F6Z9R1 75 aa4.87□□□□□ -1.63
Sec61a2-201ENSMUST00000026926 1110025L11RikO09048 78 aa4.84□□□□□ -1.63
Sec61a2-201ENSMUST00000026926 Krtap6-5Q925H3 78 aa4.84□□□□□ -1.63
Sec61a2-201ENSMUST00000026926 Gm10337F7DEP7 55 aa4.8□□□□□ -1.64
Sec61a2-201ENSMUST00000026926 Mp68P56379 58 aa4.78□□□□□ -1.64
Sec61a2-201ENSMUST00000026926 Gm11567Q9D141 195 aa4.75□□□□□ -1.65
Sec61a2-201ENSMUST00000026926 Krtap31-1Q9D644 177 aa4.5□□□□□ -1.69
Sec61a2-201ENSMUST00000026926 Gm10229O08631 77 aa4.36□□□□□ -1.71
Sec61a2-201ENSMUST00000026926 Pcp4P63054 62 aa4.19□□□□□ -1.74
Sec61a2-201ENSMUST00000026926 A030003K21RikA0A1Y7VIM3 128 aa4.18□□□□□ -1.74
Sec61a2-201ENSMUST00000026926 Krtap5-1Q64507 230 aa4.08□□□□□ -1.76
Sec61a2-201ENSMUST00000026926 A0A286YCP9 139 aa4.07□□□□□ -1.76
Sec61a2-201ENSMUST00000026926 Sprr2bO70554 98 aa4.07□□□□□ -1.76
Sec61a2-201ENSMUST00000026926 Krtap6-2O08884 159 aa3.95□□□□□ -1.78
Sec61a2-201ENSMUST00000026926 Krtap21-1Q925H4 128 aa3.88□□□□□ -1.79
Sec61a2-201ENSMUST00000026926 Gm6217A0A1Y7VJK9 128 aa3.8□□□□□ -1.8
Sec61a2-201ENSMUST00000026926 SvipQ3UZP4 77 aa3.47□□□□□ -1.85
Sec61a2-201ENSMUST00000026926 Phgr1Q8K0G7 91 aa3.16□□□□□ -1.9
Sec61a2-201ENSMUST00000026926 Gm4559A4IF42 199 aa2.96□□□□□ -1.94
Sec61a2-201ENSMUST00000026926 Ndufaf8A2AMZ4 74 aa2.75□□□□□ -1.97
Sec61a2-201ENSMUST00000026926 Gm9112A2AI92 75 aa1.71□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 11.3 ms