RNA–Protein interactions for RNA: ENSMUST00000023070.5

Upk3a-201, Transcript of Uroplakin-3a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3a, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3a-201ENSMUST00000023070 Kmt2dQ6PDK2 5588 aa5.82□□□□□ -1.48
Upk3a-201ENSMUST00000023070 Gm11639A0A1D5RLM8 5808 aa5.82□□□□□ -1.48
Upk3a-201ENSMUST00000023070 Pet100P0DJE0 76 aa5.81□□□□□ -1.48
Upk3a-201ENSMUST00000023070 Gm10197F6QEY5 67 aa5.79□□□□□ -1.48
Upk3a-201ENSMUST00000023070 Lce3bQ9CQM7 98 aa5.77□□□□□ -1.49
Upk3a-201ENSMUST00000023070 Phxr4P15974 95 aa5.76□□□□□ -1.49
Upk3a-201ENSMUST00000023070 Gm2431E9Q8S1 172 aa5.73□□□□□ -1.49
Upk3a-201ENSMUST00000023070 Muc19Q6PZE0 7524 aa5.67□□□□□ -1.5
Upk3a-201ENSMUST00000023070 Gm10272F7CZ33 110 aa5.65□□□□□ -1.5
Upk3a-201ENSMUST00000023070 Ndufb1P0DN34 57 aa5.65□□□□□ -1.5
Upk3a-201ENSMUST00000023070 Gm45337A0A1B0GS71 263 aa5.62□□□□□ -1.51
Upk3a-201ENSMUST00000023070 Lce1fB9EJP6 147 aa5.6□□□□□ -1.51
Upk3a-201ENSMUST00000023070 Lce1cQ9D1C5 147 aa5.6□□□□□ -1.51
Upk3a-201ENSMUST00000023070 Gpr98Q8VHN7 6298 aaKnown RBP5.56□□□□□ -1.52
Upk3a-201ENSMUST00000023070 Krtap7-1Q9D3I6 87 aa5.56□□□□□ -1.52
Upk3a-201ENSMUST00000023070 Tmem258P61166 79 aa5.54□□□□□ -1.52
Upk3a-201ENSMUST00000023070 Gm19935A0A1B0GSF9 52 aa5.46□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Gm10153A0A1B0GRL1 320 aa5.43□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Gm3880A0A1B0GSB3 72 aa5.43□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Gm40460A0A1B0GR10 244 aa5.41□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Gm7579A0A1B0GRJ4 243 aa5.41□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Krtap5-5Q2TA51 241 aa5.41□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Krtap5-4Q62220 223 aa5.41□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Krtap19-4Q925H7 84 aa5.41□□□□□ -1.54
Upk3a-201ENSMUST00000023070 Hmcn1D3YXG0 5634 aa5.4□□□□□ -1.55
Upk3a-201ENSMUST00000023070 SmcpP15265 143 aa5.39□□□□□ -1.55
Upk3a-201ENSMUST00000023070 Brk1Q91VR8 75 aa5.39□□□□□ -1.55
Upk3a-201ENSMUST00000023070 Gm39115A0A1B0GSH7 232 aa5.38□□□□□ -1.55
Upk3a-201ENSMUST00000023070 Gm11938Q9D3H4 131 aa5.36□□□□□ -1.55
Upk3a-201ENSMUST00000023070 DstQ91ZU6 7393 aaKnown RBP5.35□□□□□ -1.55
Upk3a-201ENSMUST00000023070 Gm10100J3QK64 120 aa5.35□□□□□ -1.55
Upk3a-201ENSMUST00000023070 Mt1P02802 61 aaKnown RBP5.33□□□□□ -1.56
Upk3a-201ENSMUST00000023070 H2al1mQ9DAD9 105 aa5.25□□□□□ -1.57
Upk3a-201ENSMUST00000023070 H2al1kJ3QP08 105 aa5.22□□□□□ -1.57
Upk3a-201ENSMUST00000023070 NebE9Q1W3 7152 aa5.21□□□□□ -1.58
Upk3a-201ENSMUST00000023070 Krtap4-16Q91W93 202 aa5.17□□□□□ -1.58
Upk3a-201ENSMUST00000023070 Gm12216A0A1W2P827 62 aa5.13□□□□□ -1.59
Upk3a-201ENSMUST00000023070 Lce3cQ91V05 98 aa5.1□□□□□ -1.59
Upk3a-201ENSMUST00000023070 Gm45618A0A1B0GSA0 219 aa5.07□□□□□ -1.6
Upk3a-201ENSMUST00000023070 Sprr2fO70557 76 aa5.02□□□□□ -1.61
Upk3a-201ENSMUST00000023070 Lce3dE9Q8V1 98 aa5.01□□□□□ -1.61
Upk3a-201ENSMUST00000023070 Romo1P60603 79 aa4.97□□□□□ -1.61
Upk3a-201ENSMUST00000023070 Mt3P28184 68 aa4.96□□□□□ -1.62
Upk3a-201ENSMUST00000023070 4933415A04RikQ9D443 101 aa4.94□□□□□ -1.62
Upk3a-201ENSMUST00000023070 Tnp1P10856 55 aa4.93□□□□□ -1.62
Upk3a-201ENSMUST00000023070 Ndufs5Q99LY9 106 aa4.93□□□□□ -1.62
Upk3a-201ENSMUST00000023070 Rps28P62858 69 aaKnown RBP4.92□□□□□ -1.62
Upk3a-201ENSMUST00000023070 ObscnA2AAJ9 8891 aaKnown RBP4.86□□□□□ -1.63
Upk3a-201ENSMUST00000023070 AhnakE9Q616 5656 aaKnown RBP4.85□□□□□ -1.63
Upk3a-201ENSMUST00000023070 Gm11567Q9D141 195 aa4.85□□□□□ -1.63
Upk3a-201ENSMUST00000023070 Lce3eF8VQJ0 98 aa4.82□□□□□ -1.64
Upk3a-201ENSMUST00000023070 Lce3fQ6PAI4 98 aa4.82□□□□□ -1.64
Upk3a-201ENSMUST00000023070 Gm29735A0A1B0GT06 219 aa4.72□□□□□ -1.65
Upk3a-201ENSMUST00000023070 Gm10142J3KMP7 120 aa4.64□□□□□ -1.67
Upk3a-201ENSMUST00000023070 4933428G20RikQ9D3X4 101 aa4.64□□□□□ -1.67
Upk3a-201ENSMUST00000023070 Sox16Q62247 57 aa4.62□□□□□ -1.67
Upk3a-201ENSMUST00000023070 Lce3aQ497I5 98 aa4.6□□□□□ -1.67
Upk3a-201ENSMUST00000023070 Gm40193A0A1B0GT39 78 aa4.58□□□□□ -1.68
Upk3a-201ENSMUST00000023070 Gm3646F6S692 53 aa4.52□□□□□ -1.69
Upk3a-201ENSMUST00000023070 Sprr2dO70555 85 aa4.37□□□□□ -1.71
Upk3a-201ENSMUST00000023070 Sprr2eO70556 76 aa4.37□□□□□ -1.71
Upk3a-201ENSMUST00000023070 Pcp4P63054 62 aa4.31□□□□□ -1.72
Upk3a-201ENSMUST00000023070 Gm10024A0A0A0MQA4 119 aa4.2□□□□□ -1.74
Upk3a-201ENSMUST00000023070 Sprr2hO70559 108 aa4.04□□□□□ -1.76
Upk3a-201ENSMUST00000023070 Muc16A0A140LJ72 8478 aa4.02□□□□□ -1.77
Upk3a-201ENSMUST00000023070 Gm10337F7DEP7 55 aa3.89□□□□□ -1.79
Upk3a-201ENSMUST00000023070 SvipQ3UZP4 77 aa3.8□□□□□ -1.8
Upk3a-201ENSMUST00000023070 Gm20538F6Z9R1 75 aa3.76□□□□□ -1.81
Upk3a-201ENSMUST00000023070 1110025L11RikO09048 78 aa3.76□□□□□ -1.81
Upk3a-201ENSMUST00000023070 Mp68P56379 58 aa3.76□□□□□ -1.81
Upk3a-201ENSMUST00000023070 Krtap6-5Q925H3 78 aa3.76□□□□□ -1.81
Upk3a-201ENSMUST00000023070 Gm10229O08631 77 aa3.39□□□□□ -1.87
Upk3a-201ENSMUST00000023070 Krtap5-1Q64507 230 aa3.27□□□□□ -1.89
Upk3a-201ENSMUST00000023070 Sprr2bO70554 98 aa3.15□□□□□ -1.91
Upk3a-201ENSMUST00000023070 Gm4559A4IF42 199 aa3.07□□□□□ -1.92
Upk3a-201ENSMUST00000023070 Krtap6-2O08884 159 aa3.07□□□□□ -1.92
Upk3a-201ENSMUST00000023070 Krtap21-1Q925H4 128 aa3.03□□□□□ -1.92
Upk3a-201ENSMUST00000023070 Ndufaf8A2AMZ4 74 aa2.63□□□□□ -1.99
Upk3a-201ENSMUST00000023070 Phgr1Q8K0G7 91 aa2.45□□□□□ -2.02
Upk3a-201ENSMUST00000023070 Gm9112A2AI92 75 aa2.26□□□□□ -2.05
Retrieved 80 of 22,080 RNA–protein pairs in 570 ms