RNA–Protein interactions for RNA: ENSMUST00000020753.3

Clhc1-201, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clhc1, Length 2,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-201ENSMUST00000020753 CubnQ9JLB4 3623 aa1.24□□□□□ -2.21
Clhc1-201ENSMUST00000020753 Cox14Q8BH51 57 aa1.23□□□□□ -2.21
Clhc1-201ENSMUST00000020753 Sprr2a3Q4KL71 83 aa1.23□□□□□ -2.21
Clhc1-201ENSMUST00000020753 Sprr2a1Q9CQK8 83 aa1.23□□□□□ -2.21
Clhc1-201ENSMUST00000020753 Rpl37Q9D823 97 aa1.22□□□□□ -2.21
Clhc1-201ENSMUST00000020753 ZanO88799 5376 aa1.21□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Tomm7Q9D173 55 aa1.21□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Ank2Q8C8R3 3898 aa1.2□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Krtap6-2O08884 159 aa1.2□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Adgrg4B7ZCC9 3073 aa1.2□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Gm10999F6Q4M4 69 aa1.2□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Sprr1aQ62266 144 aa1.19□□□□□ -2.22
Clhc1-201ENSMUST00000020753 BsnO88737 3942 aa1.19□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Muc19Q6PZE0 7524 aa1.19□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Dync1h1Q9JHU4 4644 aaKnown RBP1.18□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Dnah6E9Q0B6 4144 aa1.18□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Xirp2Q4U4S6 3784 aa1.17□□□□□ -2.22
Clhc1-201ENSMUST00000020753 D6Ertd527eA0A0N4SWI3 464 aa1.17□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Hspg2Q05793 3707 aaKnown RBP1.17□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Dnah14A0A140LIJ4 4489 aa1.17□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Gm17606F6ZL36 78 aa1.16□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Defb30Q30KN4 75 aa1.16□□□□□ -2.22
Clhc1-201ENSMUST00000020753 Krtap21-1Q925H4 128 aa1.15□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Clpsl2Q3UW21 102 aa1.15□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Dnah11E9Q7N9 4488 aa1.14□□□□□ -2.23
Clhc1-201ENSMUST00000020753 1110025L11RikO09048 78 aa1.13□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Vps13dB1ART2 4390 aa1.13□□□□□ -2.23
Clhc1-201ENSMUST00000020753 AhnakE9Q616 5656 aaKnown RBP1.13□□□□□ -2.23
Clhc1-201ENSMUST00000020753 NbdyA0A0N4SUI7 68 aa1.13□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Gm19426M0QWC7 77 aa1.12□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Gm10139O88245 57 aa1.12□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Pkhd1l1Q80ZA4 4249 aa1.12□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Dnah5Q8VHE6 4621 aa1.11□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Usmg5Q78IK2 58 aa1.11□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Lce3bQ9CQM7 98 aa1.1□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Pkhd1E9PZ36 4059 aa1.1□□□□□ -2.23
Clhc1-201ENSMUST00000020753 Nop10Q9CQS2 64 aa1.09□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Hectd4E9Q2E4 4418 aa1.07□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Sprr2dO70555 85 aa1.07□□□□□ -2.24
Clhc1-201ENSMUST00000020753 HrnrQ8VHD8 2496 aa1.07□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Dnah17Q69Z23 4481 aa1.06□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Gm16253D3Z167 63 aa1.06□□□□□ -2.24
Clhc1-201ENSMUST00000020753 ApobE9Q414 4505 aa1.05□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Dnah2P0C6F1 4456 aa1.05□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Defb42Q8BVB5 75 aa1.05□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Vps13bQ80TY5 3993 aa1.05□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Gm11627A6PWP4 55 aa1.04□□□□□ -2.24
Clhc1-201ENSMUST00000020753 Dnah10D3YYQ8 4591 aa1.02□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Sprr2fO70557 76 aa1.01□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Tff3Q62395 81 aa1.01□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Lrp1Q91ZX7 4545 aaKnown RBP0.99□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Defb5Q9EPV9 64 aa0.99□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Fat2Q5F226 4351 aa0.97□□□□□ -2.25
Clhc1-201ENSMUST00000020753 Tnp1P10856 55 aa0.96□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Sprr2iO70560 76 aa0.95□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Defb46Q4QY34 57 aa0.95□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Gpr15lA0A0B4J1N3 78 aa0.93□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Gm17402F6Z0L5 76 aa0.91□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Krtap19-5O08632 62 aa0.91□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Defb39Q70KL3 74 aa0.91□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Leap2Q91V13 76 aa0.91□□□□□ -2.26
Clhc1-201ENSMUST00000020753 Spink7Q6IE32 76 aa0.84□□□□□ -2.27
Clhc1-201ENSMUST00000020753 BC029722A0A0N4SW31 51 aa0.82□□□□□ -2.28
Clhc1-201ENSMUST00000020753 Sprr2eO70556 76 aa0.78□□□□□ -2.28
Clhc1-201ENSMUST00000020753 Krtap19-4Q925H7 84 aa0.78□□□□□ -2.28
Clhc1-201ENSMUST00000020753 Sprr2hO70559 108 aa0.77□□□□□ -2.29
Clhc1-201ENSMUST00000020753 Rps29P62274 56 aa0.73□□□□□ -2.29
Clhc1-201ENSMUST00000020753 Syne1Q6ZWR6 8799 aa0.71□□□□□ -2.3
Clhc1-201ENSMUST00000020753 ObscnA2AAJ9 8891 aaKnown RBP0.71□□□□□ -2.3
Clhc1-201ENSMUST00000020753 Krtap19-9bQ99NG9 58 aa0.69□□□□□ -2.3
Clhc1-201ENSMUST00000020753 Gm6358A0A087WPH4 74 aa0.68□□□□□ -2.3
Clhc1-201ENSMUST00000020753 Krtap8-1O08633 61 aa0.68□□□□□ -2.3
Clhc1-201ENSMUST00000020753 Krtap22-2J3QNX6 67 aa0.64□□□□□ -2.31
Clhc1-201ENSMUST00000020753 Krtap19-1Q925H2 87 aa0.62□□□□□ -2.31
Clhc1-201ENSMUST00000020753 Krtap19-9aF8WH65 55 aa0.6□□□□□ -2.31
Clhc1-201ENSMUST00000020753 Muc16A0A140LJ72 8478 aa0.58□□□□□ -2.32
Clhc1-201ENSMUST00000020753 Sprr2bO70554 98 aa0.49□□□□□ -2.33
Clhc1-201ENSMUST00000020753 Phgr1Q8K0G7 91 aa0.44□□□□□ -2.34
Clhc1-201ENSMUST00000020753 Mt2P02798 61 aa0.43□□□□□ -2.34
Clhc1-201ENSMUST00000020753 Mt1P02802 61 aaKnown RBP0.36□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 106 ms