RNA–Protein interactions for RNA: ENSMUST00000014684.4

U2af1-201, Transcript of Splicing factor U2AF 35 kDa subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene U2af1, Length 907 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1-201ENSMUST00000014684 Phxr4P15974 95 aa6.49□□□□□ -1.37
U2af1-201ENSMUST00000014684 Rps28P62858 69 aaKnown RBP6.49□□□□□ -1.37
U2af1-201ENSMUST00000014684 H2al1bA0A087WP11 105 aa6.47□□□□□ -1.37
U2af1-201ENSMUST00000014684 DstQ91ZU6 7393 aaKnown RBP6.46□□□□□ -1.38
U2af1-201ENSMUST00000014684 NebE9Q1W3 7152 aa6.45□□□□□ -1.38
U2af1-201ENSMUST00000014684 Gm9955Q8CEJ8 102 aa6.43□□□□□ -1.38
U2af1-201ENSMUST00000014684 Ndufb1P0DN34 57 aa6.42□□□□□ -1.38
U2af1-201ENSMUST00000014684 Brk1Q91VR8 75 aa6.38□□□□□ -1.39
U2af1-201ENSMUST00000014684 Gm17402F6Z0L5 76 aa6.37□□□□□ -1.39
U2af1-201ENSMUST00000014684 Gm45337A0A1B0GS71 263 aa6.33□□□□□ -1.4
U2af1-201ENSMUST00000014684 Sprr2a3Q4KL71 83 aa6.31□□□□□ -1.4
U2af1-201ENSMUST00000014684 Sprr2a1Q9CQK8 83 aa6.31□□□□□ -1.4
U2af1-201ENSMUST00000014684 Krtap4-16Q91W93 202 aa6.29□□□□□ -1.4
U2af1-201ENSMUST00000014684 Hmcn1D3YXG0 5634 aa6.27□□□□□ -1.41
U2af1-201ENSMUST00000014684 Syne1Q6ZWR6 8799 aa6.27□□□□□ -1.41
U2af1-201ENSMUST00000014684 Lce3bQ9CQM7 98 aa6.26□□□□□ -1.41
U2af1-201ENSMUST00000014684 Krtap19-9bQ99NG9 58 aa6.21□□□□□ -1.42
U2af1-201ENSMUST00000014684 Lce1fB9EJP6 147 aa6.2□□□□□ -1.42
U2af1-201ENSMUST00000014684 Lce1cQ9D1C5 147 aa6.2□□□□□ -1.42
U2af1-201ENSMUST00000014684 Gm39115A0A1B0GSH7 232 aa6.18□□□□□ -1.42
U2af1-201ENSMUST00000014684 Gm10100J3QK64 120 aa6.16□□□□□ -1.42
U2af1-201ENSMUST00000014684 Krtap19-4Q925H7 84 aa6.13□□□□□ -1.43
U2af1-201ENSMUST00000014684 Sprr2fO70557 76 aa6.06□□□□□ -1.44
U2af1-201ENSMUST00000014684 Gm40460A0A1B0GR10 244 aa6.05□□□□□ -1.44
U2af1-201ENSMUST00000014684 Gm7579A0A1B0GRJ4 243 aa6.05□□□□□ -1.44
U2af1-201ENSMUST00000014684 Krtap5-5Q2TA51 241 aa6.05□□□□□ -1.44
U2af1-201ENSMUST00000014684 Krtap5-4Q62220 223 aa6.05□□□□□ -1.44
U2af1-201ENSMUST00000014684 SvipQ3UZP4 77 aa6.04□□□□□ -1.44
U2af1-201ENSMUST00000014684 Gm10153A0A1B0GRL1 320 aa5.97□□□□□ -1.45
U2af1-201ENSMUST00000014684 Gm45618A0A1B0GSA0 219 aa5.97□□□□□ -1.45
U2af1-201ENSMUST00000014684 Gm10337F7DEP7 55 aa5.96□□□□□ -1.46
U2af1-201ENSMUST00000014684 H2al1kJ3QP08 105 aa5.95□□□□□ -1.46
U2af1-201ENSMUST00000014684 H2al1mQ9DAD9 105 aa5.95□□□□□ -1.46
U2af1-201ENSMUST00000014684 Sox16Q62247 57 aa5.94□□□□□ -1.46
U2af1-201ENSMUST00000014684 4933415A04RikQ9D443 101 aa5.92□□□□□ -1.46
U2af1-201ENSMUST00000014684 Camk2n1Q6QWF9 78 aa5.9□□□□□ -1.46
U2af1-201ENSMUST00000014684 Gm10272F7CZ33 110 aa5.83□□□□□ -1.48
U2af1-201ENSMUST00000014684 Gm3880A0A1B0GSB3 72 aa5.82□□□□□ -1.48
U2af1-201ENSMUST00000014684 A0A286YCP9 139 aa5.8□□□□□ -1.48
U2af1-201ENSMUST00000014684 AhnakE9Q616 5656 aaKnown RBP5.79□□□□□ -1.48
U2af1-201ENSMUST00000014684 Gm11938Q9D3H4 131 aa5.74□□□□□ -1.49
U2af1-201ENSMUST00000014684 Ndufs5Q99LY9 106 aa5.72□□□□□ -1.49
U2af1-201ENSMUST00000014684 Mt1P02802 61 aaKnown RBP5.7□□□□□ -1.5
U2af1-201ENSMUST00000014684 A030003K21RikA0A1Y7VIM3 128 aa5.69□□□□□ -1.5
U2af1-201ENSMUST00000014684 Gm12216A0A1W2P827 62 aa5.67□□□□□ -1.5
U2af1-201ENSMUST00000014684 Gm3646F6S692 53 aa5.66□□□□□ -1.5
U2af1-201ENSMUST00000014684 Krtap7-1Q9D3I6 87 aa5.55□□□□□ -1.52
U2af1-201ENSMUST00000014684 Romo1P60603 79 aa5.52□□□□□ -1.53
U2af1-201ENSMUST00000014684 Gm6217A0A1Y7VJK9 128 aa5.43□□□□□ -1.54
U2af1-201ENSMUST00000014684 Mt3P28184 68 aa5.42□□□□□ -1.54
U2af1-201ENSMUST00000014684 Lce3cQ91V05 98 aa5.36□□□□□ -1.55
U2af1-201ENSMUST00000014684 Gm10142J3KMP7 120 aa5.28□□□□□ -1.56
U2af1-201ENSMUST00000014684 Lce3dE9Q8V1 98 aa5.23□□□□□ -1.57
U2af1-201ENSMUST00000014684 Tnp1P10856 55 aa5.15□□□□□ -1.59
U2af1-201ENSMUST00000014684 Gm40193A0A1B0GT39 78 aa5.09□□□□□ -1.59
U2af1-201ENSMUST00000014684 Gm11567Q9D141 195 aa5.05□□□□□ -1.6
U2af1-201ENSMUST00000014684 Lce3eF8VQJ0 98 aa4.94□□□□□ -1.62
U2af1-201ENSMUST00000014684 Lce3fQ6PAI4 98 aa4.94□□□□□ -1.62
U2af1-201ENSMUST00000014684 ObscnA2AAJ9 8891 aaKnown RBP4.9□□□□□ -1.62
U2af1-201ENSMUST00000014684 Sprr2hO70559 108 aa4.86□□□□□ -1.63
U2af1-201ENSMUST00000014684 4933428G20RikQ9D3X4 101 aa4.86□□□□□ -1.63
U2af1-201ENSMUST00000014684 Sprr2eO70556 76 aa4.82□□□□□ -1.64
U2af1-201ENSMUST00000014684 Lce3aQ497I5 98 aa4.72□□□□□ -1.65
U2af1-201ENSMUST00000014684 Mp68P56379 58 aa4.63□□□□□ -1.67
U2af1-201ENSMUST00000014684 Gm29735A0A1B0GT06 219 aa4.58□□□□□ -1.68
U2af1-201ENSMUST00000014684 Muc16A0A140LJ72 8478 aa4.56□□□□□ -1.68
U2af1-201ENSMUST00000014684 Gm10024A0A0A0MQA4 119 aa4.47□□□□□ -1.69
U2af1-201ENSMUST00000014684 Sprr2dO70555 85 aa4.39□□□□□ -1.71
U2af1-201ENSMUST00000014684 Gm20538F6Z9R1 75 aa4.38□□□□□ -1.71
U2af1-201ENSMUST00000014684 Ndufaf8A2AMZ4 74 aa4.06□□□□□ -1.76
U2af1-201ENSMUST00000014684 1110025L11RikO09048 78 aa3.9□□□□□ -1.79
U2af1-201ENSMUST00000014684 Krtap6-5Q925H3 78 aa3.9□□□□□ -1.79
U2af1-201ENSMUST00000014684 Krtap5-1Q64507 230 aa3.85□□□□□ -1.79
U2af1-201ENSMUST00000014684 Sprr2bO70554 98 aa3.76□□□□□ -1.81
U2af1-201ENSMUST00000014684 Gm10229O08631 77 aa3.55□□□□□ -1.84
U2af1-201ENSMUST00000014684 Gm9112A2AI92 75 aa3.48□□□□□ -1.85
U2af1-201ENSMUST00000014684 Gm4559A4IF42 199 aa3.33□□□□□ -1.88
U2af1-201ENSMUST00000014684 Krtap6-2O08884 159 aa3.3□□□□□ -1.88
U2af1-201ENSMUST00000014684 Krtap21-1Q925H4 128 aa3.08□□□□□ -1.92
U2af1-201ENSMUST00000014684 Phgr1Q8K0G7 91 aa2.62□□□□□ -1.99
Retrieved 80 of 22,080 RNA–protein pairs in 119.9 ms