RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gtf2h5Q8K2X8 71 aa9.81□□□□□ -0.84
Pcf11-204ENSMUST00000208058 Prm2P07978 107 aa9.8□□□□□ -0.84
Pcf11-204ENSMUST00000208058 Hist1h4aP62806 103 aaKnown RBP9.78□□□□□ -0.84
Pcf11-204ENSMUST00000208058 Krtap19-9aF8WH65 55 aa9.75□□□□□ -0.85
Pcf11-204ENSMUST00000208058 Pxt1Q8K459 51 aa9.75□□□□□ -0.85
Pcf11-204ENSMUST00000208058 Krtap4-9B1AQA9 244 aa9.73□□□□□ -0.85
Pcf11-204ENSMUST00000208058 Spint4Q9D263 159 aa9.7□□□□□ -0.86
Pcf11-204ENSMUST00000208058 Fsip2A2ARZ3 6995 aa9.7□□□□□ -0.86
Pcf11-204ENSMUST00000208058 Gm21798J3QNU5 87 aa9.64□□□□□ -0.87
Pcf11-204ENSMUST00000208058 Mt4P47945 62 aa9.54□□□□□ -0.88
Pcf11-204ENSMUST00000208058 BC029722A0A0N4SW31 51 aa9.48□□□□□ -0.89
Pcf11-204ENSMUST00000208058 CriptO70333 101 aa9.48□□□□□ -0.89
Pcf11-204ENSMUST00000208058 Gm10643Q3URG9 111 aa9.47□□□□□ -0.89
Pcf11-204ENSMUST00000208058 Gm20537G3UYK7 97 aa9.46□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Bud31Q6PGH1 103 aa9.46□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Lce1iQ9D6P5 149 aa9.46□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Defb1P56386 69 aa9.43□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Cox6b2Q80ZN9 88 aa9.43□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Gm17606F6ZL36 78 aa9.42□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Ndufc1Q9CQY9 76 aa9.42□□□□□ -0.9
Pcf11-204ENSMUST00000208058 Fam240bJ3QMB3 78 aa9.39□□□□□ -0.91
Pcf11-204ENSMUST00000208058 Krtap6-3A0A087WQL6 57 aa9.37□□□□□ -0.91
Pcf11-204ENSMUST00000208058 Krtap9-3Q3V2C1 136 aa9.37□□□□□ -0.91
Pcf11-204ENSMUST00000208058 Krtap4-13Q9D7P3 165 aa9.37□□□□□ -0.91
Pcf11-204ENSMUST00000208058 Gm10160F6Y577 67 aa9.34□□□□□ -0.91
Pcf11-204ENSMUST00000208058 Spink7Q6IE32 76 aa9.33□□□□□ -0.92
Pcf11-204ENSMUST00000208058 Mt2P02798 61 aa9.31□□□□□ -0.92
Pcf11-204ENSMUST00000208058 Lce1a2Q9D1K4 149 aa9.29□□□□□ -0.92
Pcf11-204ENSMUST00000208058 Atox1O08997 68 aaKnown RBP9.28□□□□□ -0.92
Pcf11-204ENSMUST00000208058 Gm45213A0A0U1RNZ6 101 aa9.25□□□□□ -0.93
Pcf11-204ENSMUST00000208058 Gm10382Q3V0T5 144 aa9.25□□□□□ -0.93
Pcf11-204ENSMUST00000208058 Krtap8-1O08633 61 aa9.19□□□□□ -0.94
Pcf11-204ENSMUST00000208058 Lce1bQ9D149 137 aa9.19□□□□□ -0.94
Pcf11-204ENSMUST00000208058 4930518I15RikQ3V2W7 57 aa9.18□□□□□ -0.94
Pcf11-204ENSMUST00000208058 Atp5eP56382 52 aa9.13□□□□□ -0.95
Pcf11-204ENSMUST00000208058 Coa6Q8BGD8 79 aa9.11□□□□□ -0.95
Pcf11-204ENSMUST00000208058 Sprr2kO70562 68 aa9.09□□□□□ -0.95
Pcf11-204ENSMUST00000208058 SptssbQ925E8 76 aa9.07□□□□□ -0.96
Pcf11-204ENSMUST00000208058 Limd2Q8BGB5 128 aa9.03□□□□□ -0.96
Pcf11-204ENSMUST00000208058 Serp2Q6TAW2 65 aa9.01□□□□□ -0.97
Pcf11-204ENSMUST00000208058 B230307C23RikQ8BLB2 64 aa9□□□□□ -0.97
Pcf11-204ENSMUST00000208058 Lce1lQ9D1G7 135 aa8.99□□□□□ -0.97
Pcf11-204ENSMUST00000208058 2300003K06RikA2A4M0 262 aa8.97□□□□□ -0.97
Pcf11-204ENSMUST00000208058 Gm38119A0A0A6YX29 146 aa8.94□□□□□ -0.98
Pcf11-204ENSMUST00000208058 Krtap4-7Q9D732 168 aa8.88□□□□□ -0.99
Pcf11-204ENSMUST00000208058 Krtap22-2J3QNX6 67 aa8.87□□□□□ -0.99
Pcf11-204ENSMUST00000208058 Coa5Q99M07 74 aa8.83□□□□□ -1
Pcf11-204ENSMUST00000208058 Anapc13Q8R034 74 aa8.81□□□□□ -1
Pcf11-204ENSMUST00000208058 Sprr2a3Q4KL71 83 aa8.77□□□□□ -1.01
Pcf11-204ENSMUST00000208058 Sprr2a1Q9CQK8 83 aa8.77□□□□□ -1.01
Pcf11-204ENSMUST00000208058 Lce1a1Q9CQH5 143 aa8.57□□□□□ -1.04
Pcf11-204ENSMUST00000208058 Krtap20-2E9Q0A8 60 aa8.56□□□□□ -1.04
Pcf11-204ENSMUST00000208058 Prr13Q9CQJ5 137 aa8.55□□□□□ -1.04
Pcf11-204ENSMUST00000208058 Sprr2gO70558 76 aa8.53□□□□□ -1.04
Pcf11-204ENSMUST00000208058 Gm17402F6Z0L5 76 aa8.52□□□□□ -1.05
Pcf11-204ENSMUST00000208058 Gm20661K7N787 53 aa8.52□□□□□ -1.05
Pcf11-204ENSMUST00000208058 Lce1hQ9D6R3 140 aa8.52□□□□□ -1.05
Pcf11-204ENSMUST00000208058 Smim20D3Z7Q2 69 aa8.51□□□□□ -1.05
Pcf11-204ENSMUST00000208058 Gm19668J3QMD1 248 aa8.47□□□□□ -1.05
Pcf11-204ENSMUST00000208058 Lce1eQ9D139 143 aa8.43□□□□□ -1.06
Pcf11-204ENSMUST00000208058 Smlr1J3QMJ4 66 aa8.41□□□□□ -1.06
Pcf11-204ENSMUST00000208058 SnurfQ9WU12 71 aa8.4□□□□□ -1.06
Pcf11-204ENSMUST00000208058 Gm9955Q8CEJ8 102 aa8.35□□□□□ -1.07
Pcf11-204ENSMUST00000208058 Sec61gP60060 68 aa8.32□□□□□ -1.08
Pcf11-204ENSMUST00000208058 Pet100P0DJE0 76 aa8.31□□□□□ -1.08
Pcf11-204ENSMUST00000208058 H2al1aQ5M8Q2 105 aa8.31□□□□□ -1.08
Pcf11-204ENSMUST00000208058 H2al1eQ810S6 105 aa8.31□□□□□ -1.08
Pcf11-204ENSMUST00000208058 Serp1Q9Z1W5 66 aa8.31□□□□□ -1.08
Pcf11-204ENSMUST00000208058 Gm21887J3QQ04 176 aa8.3□□□□□ -1.08
Pcf11-204ENSMUST00000208058 Cdc42se1Q8BHL7 80 aa8.28□□□□□ -1.08
Pcf11-204ENSMUST00000208058 2310046K23RikA0A0A6YVW6 87 aa8.23□□□□□ -1.09
Pcf11-204ENSMUST00000208058 Krtap19-9bQ99NG9 58 aa8.22□□□□□ -1.09
Pcf11-204ENSMUST00000208058 A0A1Y7VJH8 109 aa8.21□□□□□ -1.1
Pcf11-204ENSMUST00000208058 Uqcr11Q9CPX8 56 aa8.19□□□□□ -1.1
Pcf11-204ENSMUST00000208058 Gm10197F6QEY5 67 aa8.18□□□□□ -1.1
Pcf11-204ENSMUST00000208058 Tmem258P61166 79 aa8.18□□□□□ -1.1
Pcf11-204ENSMUST00000208058 Phxr4P15974 95 aa8.13□□□□□ -1.11
Pcf11-204ENSMUST00000208058 H2al1bA0A087WP11 105 aa8.09□□□□□ -1.11
Pcf11-204ENSMUST00000208058 Lce1dQ9D731 133 aa8.08□□□□□ -1.12
Pcf11-204ENSMUST00000208058 Gm19935A0A1B0GSF9 52 aa8.06□□□□□ -1.12
Pcf11-204ENSMUST00000208058 Eppk1Q8R0W0 6548 aa8.05□□□□□ -1.12
Pcf11-204ENSMUST00000208058 Krtap5-2Q9D5Z7 189 aa8□□□□□ -1.13
Pcf11-204ENSMUST00000208058 Camk2n1Q6QWF9 78 aa7.93□□□□□ -1.14
Pcf11-204ENSMUST00000208058 Brk1Q91VR8 75 aa7.91□□□□□ -1.14
Pcf11-204ENSMUST00000208058 Ndufb1P0DN34 57 aa7.9□□□□□ -1.14
Pcf11-204ENSMUST00000208058 Gm11559Q9D3H7 191 aa7.87□□□□□ -1.15
Pcf11-204ENSMUST00000208058 A030005L19RikA0A1Y7VIU2 113 aa7.83□□□□□ -1.16
Pcf11-204ENSMUST00000208058 Lce1kJ3QP15 125 aa7.81□□□□□ -1.16
Pcf11-204ENSMUST00000208058 Sprr2iO70560 76 aa7.81□□□□□ -1.16
Pcf11-204ENSMUST00000208058 SmcpP15265 143 aa7.72□□□□□ -1.17
Pcf11-204ENSMUST00000208058 Gm11554B1AQB2 190 aa7.69□□□□□ -1.18
Pcf11-204ENSMUST00000208058 Macf1Q9QXZ0 7354 aaKnown RBP7.69□□□□□ -1.18
Pcf11-204ENSMUST00000208058 Syne1Q6ZWR6 8799 aa7.69□□□□□ -1.18
Pcf11-204ENSMUST00000208058 Gm4553A0A1B0GSA9 284 aa7.66□□□□□ -1.18
Pcf11-204ENSMUST00000208058 Gm11568A2A4M2 211 aa7.63□□□□□ -1.19
Pcf11-204ENSMUST00000208058 Krtap9-1Q64526 186 aa7.63□□□□□ -1.19
Pcf11-204ENSMUST00000208058 Kmt2dQ6PDK2 5588 aa7.58□□□□□ -1.2
Pcf11-204ENSMUST00000208058 Rps28P62858 69 aaKnown RBP7.53□□□□□ -1.2
Pcf11-204ENSMUST00000208058 Lce3bQ9CQM7 98 aa7.53□□□□□ -1.2
Pcf11-204ENSMUST00000208058 Gm11639A0A1D5RLM8 5808 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 84.5 ms