RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gtf2h5Q8K2X8 71 aa9,81□□□□□ -0,84
Pcf11-204ENSMUST00000208058 Prm2P07978 107 aa9,8□□□□□ -0,84
Pcf11-204ENSMUST00000208058 Hist1h4aP62806 103 aaKnown RBP9,78□□□□□ -0,84
Pcf11-204ENSMUST00000208058 Krtap19-9aF8WH65 55 aa9,75□□□□□ -0,85
Pcf11-204ENSMUST00000208058 Pxt1Q8K459 51 aa9,75□□□□□ -0,85
Pcf11-204ENSMUST00000208058 Krtap4-9B1AQA9 244 aa9,73□□□□□ -0,85
Pcf11-204ENSMUST00000208058 Spint4Q9D263 159 aa9,7□□□□□ -0,86
Pcf11-204ENSMUST00000208058 Fsip2A2ARZ3 6995 aa9,7□□□□□ -0,86
Pcf11-204ENSMUST00000208058 Gm21798J3QNU5 87 aa9,64□□□□□ -0,87
Pcf11-204ENSMUST00000208058 Mt4P47945 62 aa9,54□□□□□ -0,88
Pcf11-204ENSMUST00000208058 BC029722A0A0N4SW31 51 aa9,48□□□□□ -0,89
Pcf11-204ENSMUST00000208058 CriptO70333 101 aa9,48□□□□□ -0,89
Pcf11-204ENSMUST00000208058 Gm10643Q3URG9 111 aa9,47□□□□□ -0,89
Pcf11-204ENSMUST00000208058 Gm20537G3UYK7 97 aa9,46□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Bud31Q6PGH1 103 aa9,46□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Lce1iQ9D6P5 149 aa9,46□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Defb1P56386 69 aa9,43□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Cox6b2Q80ZN9 88 aa9,43□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Gm17606F6ZL36 78 aa9,42□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Ndufc1Q9CQY9 76 aa9,42□□□□□ -0,9
Pcf11-204ENSMUST00000208058 Fam240bJ3QMB3 78 aa9,39□□□□□ -0,91
Pcf11-204ENSMUST00000208058 Krtap6-3A0A087WQL6 57 aa9,37□□□□□ -0,91
Pcf11-204ENSMUST00000208058 Krtap9-3Q3V2C1 136 aa9,37□□□□□ -0,91
Pcf11-204ENSMUST00000208058 Krtap4-13Q9D7P3 165 aa9,37□□□□□ -0,91
Pcf11-204ENSMUST00000208058 Gm10160F6Y577 67 aa9,34□□□□□ -0,91
Pcf11-204ENSMUST00000208058 Spink7Q6IE32 76 aa9,33□□□□□ -0,92
Pcf11-204ENSMUST00000208058 Mt2P02798 61 aa9,31□□□□□ -0,92
Pcf11-204ENSMUST00000208058 Lce1a2Q9D1K4 149 aa9,29□□□□□ -0,92
Pcf11-204ENSMUST00000208058 Atox1O08997 68 aaKnown RBP9,28□□□□□ -0,92
Pcf11-204ENSMUST00000208058 Gm45213A0A0U1RNZ6 101 aa9,25□□□□□ -0,93
Pcf11-204ENSMUST00000208058 Gm10382Q3V0T5 144 aa9,25□□□□□ -0,93
Pcf11-204ENSMUST00000208058 Krtap8-1O08633 61 aa9,19□□□□□ -0,94
Pcf11-204ENSMUST00000208058 Lce1bQ9D149 137 aa9,19□□□□□ -0,94
Pcf11-204ENSMUST00000208058 4930518I15RikQ3V2W7 57 aa9,18□□□□□ -0,94
Pcf11-204ENSMUST00000208058 Atp5eP56382 52 aa9,13□□□□□ -0,95
Pcf11-204ENSMUST00000208058 Coa6Q8BGD8 79 aa9,11□□□□□ -0,95
Pcf11-204ENSMUST00000208058 Sprr2kO70562 68 aa9,09□□□□□ -0,95
Pcf11-204ENSMUST00000208058 SptssbQ925E8 76 aa9,07□□□□□ -0,96
Pcf11-204ENSMUST00000208058 Limd2Q8BGB5 128 aa9,03□□□□□ -0,96
Pcf11-204ENSMUST00000208058 Serp2Q6TAW2 65 aa9,01□□□□□ -0,97
Pcf11-204ENSMUST00000208058 B230307C23RikQ8BLB2 64 aa9□□□□□ -0,97
Pcf11-204ENSMUST00000208058 Lce1lQ9D1G7 135 aa8,99□□□□□ -0,97
Pcf11-204ENSMUST00000208058 2300003K06RikA2A4M0 262 aa8,97□□□□□ -0,97
Pcf11-204ENSMUST00000208058 Gm38119A0A0A6YX29 146 aa8,94□□□□□ -0,98
Pcf11-204ENSMUST00000208058 Krtap4-7Q9D732 168 aa8,88□□□□□ -0,99
Pcf11-204ENSMUST00000208058 Krtap22-2J3QNX6 67 aa8,87□□□□□ -0,99
Pcf11-204ENSMUST00000208058 Coa5Q99M07 74 aa8,83□□□□□ -1
Pcf11-204ENSMUST00000208058 Anapc13Q8R034 74 aa8,81□□□□□ -1
Pcf11-204ENSMUST00000208058 Sprr2a3Q4KL71 83 aa8,77□□□□□ -1,01
Pcf11-204ENSMUST00000208058 Sprr2a1Q9CQK8 83 aa8,77□□□□□ -1,01
Pcf11-204ENSMUST00000208058 Lce1a1Q9CQH5 143 aa8,57□□□□□ -1,04
Pcf11-204ENSMUST00000208058 Krtap20-2E9Q0A8 60 aa8,56□□□□□ -1,04
Pcf11-204ENSMUST00000208058 Prr13Q9CQJ5 137 aa8,55□□□□□ -1,04
Pcf11-204ENSMUST00000208058 Sprr2gO70558 76 aa8,53□□□□□ -1,04
Pcf11-204ENSMUST00000208058 Gm17402F6Z0L5 76 aa8,52□□□□□ -1,05
Pcf11-204ENSMUST00000208058 Gm20661K7N787 53 aa8,52□□□□□ -1,05
Pcf11-204ENSMUST00000208058 Lce1hQ9D6R3 140 aa8,52□□□□□ -1,05
Pcf11-204ENSMUST00000208058 Smim20D3Z7Q2 69 aa8,51□□□□□ -1,05
Pcf11-204ENSMUST00000208058 Gm19668J3QMD1 248 aa8,47□□□□□ -1,05
Pcf11-204ENSMUST00000208058 Lce1eQ9D139 143 aa8,43□□□□□ -1,06
Pcf11-204ENSMUST00000208058 Smlr1J3QMJ4 66 aa8,41□□□□□ -1,06
Pcf11-204ENSMUST00000208058 SnurfQ9WU12 71 aa8,4□□□□□ -1,06
Pcf11-204ENSMUST00000208058 Gm9955Q8CEJ8 102 aa8,35□□□□□ -1,07
Pcf11-204ENSMUST00000208058 Sec61gP60060 68 aa8,32□□□□□ -1,08
Pcf11-204ENSMUST00000208058 Pet100P0DJE0 76 aa8,31□□□□□ -1,08
Pcf11-204ENSMUST00000208058 H2al1aQ5M8Q2 105 aa8,31□□□□□ -1,08
Pcf11-204ENSMUST00000208058 H2al1eQ810S6 105 aa8,31□□□□□ -1,08
Pcf11-204ENSMUST00000208058 Serp1Q9Z1W5 66 aa8,31□□□□□ -1,08
Pcf11-204ENSMUST00000208058 Gm21887J3QQ04 176 aa8,3□□□□□ -1,08
Pcf11-204ENSMUST00000208058 Cdc42se1Q8BHL7 80 aa8,28□□□□□ -1,08
Pcf11-204ENSMUST00000208058 2310046K23RikA0A0A6YVW6 87 aa8,23□□□□□ -1,09
Pcf11-204ENSMUST00000208058 Krtap19-9bQ99NG9 58 aa8,22□□□□□ -1,09
Pcf11-204ENSMUST00000208058 A0A1Y7VJH8 109 aa8,21□□□□□ -1,1
Pcf11-204ENSMUST00000208058 Uqcr11Q9CPX8 56 aa8,19□□□□□ -1,1
Pcf11-204ENSMUST00000208058 Gm10197F6QEY5 67 aa8,18□□□□□ -1,1
Pcf11-204ENSMUST00000208058 Tmem258P61166 79 aa8,18□□□□□ -1,1
Pcf11-204ENSMUST00000208058 Phxr4P15974 95 aa8,13□□□□□ -1,11
Pcf11-204ENSMUST00000208058 H2al1bA0A087WP11 105 aa8,09□□□□□ -1,11
Pcf11-204ENSMUST00000208058 Lce1dQ9D731 133 aa8,08□□□□□ -1,12
Pcf11-204ENSMUST00000208058 Gm19935A0A1B0GSF9 52 aa8,06□□□□□ -1,12
Pcf11-204ENSMUST00000208058 Eppk1Q8R0W0 6548 aa8,05□□□□□ -1,12
Pcf11-204ENSMUST00000208058 Krtap5-2Q9D5Z7 189 aa8□□□□□ -1,13
Pcf11-204ENSMUST00000208058 Camk2n1Q6QWF9 78 aa7,93□□□□□ -1,14
Pcf11-204ENSMUST00000208058 Brk1Q91VR8 75 aa7,91□□□□□ -1,14
Pcf11-204ENSMUST00000208058 Ndufb1P0DN34 57 aa7,9□□□□□ -1,14
Pcf11-204ENSMUST00000208058 Gm11559Q9D3H7 191 aa7,87□□□□□ -1,15
Pcf11-204ENSMUST00000208058 A030005L19RikA0A1Y7VIU2 113 aa7,83□□□□□ -1,16
Pcf11-204ENSMUST00000208058 Lce1kJ3QP15 125 aa7,81□□□□□ -1,16
Pcf11-204ENSMUST00000208058 Sprr2iO70560 76 aa7,81□□□□□ -1,16
Pcf11-204ENSMUST00000208058 SmcpP15265 143 aa7,72□□□□□ -1,17
Pcf11-204ENSMUST00000208058 Gm11554B1AQB2 190 aa7,69□□□□□ -1,18
Pcf11-204ENSMUST00000208058 Macf1Q9QXZ0 7354 aaKnown RBP7,69□□□□□ -1,18
Pcf11-204ENSMUST00000208058 Syne1Q6ZWR6 8799 aa7,69□□□□□ -1,18
Pcf11-204ENSMUST00000208058 Gm4553A0A1B0GSA9 284 aa7,66□□□□□ -1,18
Pcf11-204ENSMUST00000208058 Gm11568A2A4M2 211 aa7,63□□□□□ -1,19
Pcf11-204ENSMUST00000208058 Krtap9-1Q64526 186 aa7,63□□□□□ -1,19
Pcf11-204ENSMUST00000208058 Kmt2dQ6PDK2 5588 aa7,58□□□□□ -1,2
Pcf11-204ENSMUST00000208058 Rps28P62858 69 aaKnown RBP7,53□□□□□ -1,2
Pcf11-204ENSMUST00000208058 Lce3bQ9CQM7 98 aa7,53□□□□□ -1,2
Pcf11-204ENSMUST00000208058 Gm11639A0A1D5RLM8 5808 aa7,52□□□□□ -1,21
Retrieved 100 of 22,080 RNA–protein pairs in 49,9 ms