RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Ndufc1Q9CQY9 76 aa7.1□□□□□ -1.27
Hmgb1-208ENSMUST00000139443 Bud31Q6PGH1 103 aa7.08□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Gm11564A2A4L9 201 aa7.06□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Gm11563B1AQ90 168 aa7.06□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Gm11595B1AQA7 289 aa7.06□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Krtap4-8B1AQA8 209 aa7.06□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Gm17606F6ZL36 78 aa7.06□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Krtap19-9aF8WH65 55 aa7.03□□□□□ -1.28
Hmgb1-208ENSMUST00000139443 Krtap4-7Q9D732 168 aa7.02□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Atox1O08997 68 aaKnown RBP7.01□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Prm2P07978 107 aa7.01□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Defb1P56386 69 aa7.01□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Gm6358A0A087WPH4 74 aa7□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 BC029722A0A0N4SW31 51 aa7□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Gm10160F6Y577 67 aa7□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 Gm10643Q3URG9 111 aa6.97□□□□□ -1.29
Hmgb1-208ENSMUST00000139443 CriptO70333 101 aa6.96□□□□□ -1.3
Hmgb1-208ENSMUST00000139443 Cox6b2Q80ZN9 88 aa6.94□□□□□ -1.3
Hmgb1-208ENSMUST00000139443 Spink7Q6IE32 76 aa6.91□□□□□ -1.3
Hmgb1-208ENSMUST00000139443 Gm20537G3UYK7 97 aa6.9□□□□□ -1.3
Hmgb1-208ENSMUST00000139443 SptssbQ925E8 76 aa6.89□□□□□ -1.31
Hmgb1-208ENSMUST00000139443 Krtap4-9B1AQA9 244 aa6.84□□□□□ -1.31
Hmgb1-208ENSMUST00000139443 Coa6Q8BGD8 79 aa6.84□□□□□ -1.31
Hmgb1-208ENSMUST00000139443 Fam240bJ3QMB3 78 aa6.79□□□□□ -1.32
Hmgb1-208ENSMUST00000139443 Gm10382Q3V0T5 144 aa6.79□□□□□ -1.32
Hmgb1-208ENSMUST00000139443 4930518I15RikQ3V2W7 57 aa6.79□□□□□ -1.32
Hmgb1-208ENSMUST00000139443 Limd2Q8BGB5 128 aa6.76□□□□□ -1.33
Hmgb1-208ENSMUST00000139443 Fsip2A2ARZ3 6995 aa6.75□□□□□ -1.33
Hmgb1-208ENSMUST00000139443 Mt4P47945 62 aa6.74□□□□□ -1.33
Hmgb1-208ENSMUST00000139443 B230307C23RikQ8BLB2 64 aa6.73□□□□□ -1.33
Hmgb1-208ENSMUST00000139443 Atp5eP56382 52 aa6.72□□□□□ -1.33
Hmgb1-208ENSMUST00000139443 Lce1iQ9D6P5 149 aa6.7□□□□□ -1.34
Hmgb1-208ENSMUST00000139443 Krtap9-3Q3V2C1 136 aa6.65□□□□□ -1.34
Hmgb1-208ENSMUST00000139443 Serp2Q6TAW2 65 aa6.65□□□□□ -1.34
Hmgb1-208ENSMUST00000139443 Mt2P02798 61 aa6.64□□□□□ -1.35
Hmgb1-208ENSMUST00000139443 Krtap8-1O08633 61 aa6.63□□□□□ -1.35
Hmgb1-208ENSMUST00000139443 Gm45213A0A0U1RNZ6 101 aa6.62□□□□□ -1.35
Hmgb1-208ENSMUST00000139443 Krtap6-3A0A087WQL6 57 aa6.59□□□□□ -1.35
Hmgb1-208ENSMUST00000139443 Krtap4-13Q9D7P3 165 aa6.59□□□□□ -1.35
Hmgb1-208ENSMUST00000139443 Coa5Q99M07 74 aa6.58□□□□□ -1.36
Hmgb1-208ENSMUST00000139443 Lce1a2Q9D1K4 149 aa6.57□□□□□ -1.36
Hmgb1-208ENSMUST00000139443 Sprr2kO70562 68 aa6.54□□□□□ -1.36
Hmgb1-208ENSMUST00000139443 Smim20D3Z7Q2 69 aa6.51□□□□□ -1.37
Hmgb1-208ENSMUST00000139443 Lce1bQ9D149 137 aa6.45□□□□□ -1.38
Hmgb1-208ENSMUST00000139443 Anapc13Q8R034 74 aa6.42□□□□□ -1.38
Hmgb1-208ENSMUST00000139443 Gm20661K7N787 53 aa6.39□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Sec61gP60060 68 aa6.38□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Gm38119A0A0A6YX29 146 aa6.37□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Sprr2a3Q4KL71 83 aa6.37□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Sprr2a1Q9CQK8 83 aa6.37□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Krtap22-2J3QNX6 67 aa6.35□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Lce1lQ9D1G7 135 aa6.35□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 2300003K06RikA2A4M0 262 aa6.34□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Serp1Q9Z1W5 66 aa6.34□□□□□ -1.39
Hmgb1-208ENSMUST00000139443 Smlr1J3QMJ4 66 aa6.32□□□□□ -1.4
Hmgb1-208ENSMUST00000139443 Gm17402F6Z0L5 76 aa6.3□□□□□ -1.4
Hmgb1-208ENSMUST00000139443 H2al1aQ5M8Q2 105 aa6.28□□□□□ -1.4
Hmgb1-208ENSMUST00000139443 H2al1eQ810S6 105 aa6.28□□□□□ -1.4
Hmgb1-208ENSMUST00000139443 Gm9955Q8CEJ8 102 aa6.28□□□□□ -1.4
Hmgb1-208ENSMUST00000139443 Gm19668J3QMD1 248 aa6.21□□□□□ -1.42
Hmgb1-208ENSMUST00000139443 Pet100P0DJE0 76 aa6.18□□□□□ -1.42
Hmgb1-208ENSMUST00000139443 Uqcr11Q9CPX8 56 aa6.17□□□□□ -1.42
Hmgb1-208ENSMUST00000139443 Prr13Q9CQJ5 137 aa6.17□□□□□ -1.42
Hmgb1-208ENSMUST00000139443 Sprr2gO70558 76 aa6.14□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 SnurfQ9WU12 71 aa6.13□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 A0A1Y7VJH8 109 aa6.11□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 H2al1bA0A087WP11 105 aa6.09□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 Gm21887J3QQ04 176 aa6.09□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 Cdc42se1Q8BHL7 80 aa6.09□□□□□ -1.43
Hmgb1-208ENSMUST00000139443 Lce1a1Q9CQH5 143 aa6.04□□□□□ -1.44
Hmgb1-208ENSMUST00000139443 Krtap20-2E9Q0A8 60 aa6.02□□□□□ -1.45
Hmgb1-208ENSMUST00000139443 Gm10197F6QEY5 67 aa6.01□□□□□ -1.45
Hmgb1-208ENSMUST00000139443 Phxr4P15974 95 aa6□□□□□ -1.45
Hmgb1-208ENSMUST00000139443 Krtap19-9bQ99NG9 58 aa5.98□□□□□ -1.45
Hmgb1-208ENSMUST00000139443 Ndufb1P0DN34 57 aa5.96□□□□□ -1.46
Hmgb1-208ENSMUST00000139443 Tmem258P61166 79 aa5.96□□□□□ -1.46
Hmgb1-208ENSMUST00000139443 Camk2n1Q6QWF9 78 aa5.96□□□□□ -1.46
Hmgb1-208ENSMUST00000139443 Lce1hQ9D6R3 140 aa5.96□□□□□ -1.46
Hmgb1-208ENSMUST00000139443 2310046K23RikA0A0A6YVW6 87 aa5.91□□□□□ -1.46
Hmgb1-208ENSMUST00000139443 Krtap28-10A0A1Y7VP58 119 aa5.89□□□□□ -1.47
Hmgb1-208ENSMUST00000139443 Lce1eQ9D139 143 aa5.89□□□□□ -1.47
Hmgb1-208ENSMUST00000139443 A0A1Y7VLE6 161 aa5.88□□□□□ -1.47
Hmgb1-208ENSMUST00000139443 Gm19935A0A1B0GSF9 52 aa5.85□□□□□ -1.47
Hmgb1-208ENSMUST00000139443 Krtap28-13A0A087WQP5 138 aa5.84□□□□□ -1.47
Hmgb1-208ENSMUST00000139443 Brk1Q91VR8 75 aa5.77□□□□□ -1.49
Hmgb1-208ENSMUST00000139443 Lce1dQ9D731 133 aa5.75□□□□□ -1.49
Hmgb1-208ENSMUST00000139443 A030005K14RikA0A1Y7VNY1 122 aa5.74□□□□□ -1.49
Hmgb1-208ENSMUST00000139443 Eppk1Q8R0W0 6548 aa5.67□□□□□ -1.5
Hmgb1-208ENSMUST00000139443 Sprr2iO70560 76 aa5.63□□□□□ -1.51
Hmgb1-208ENSMUST00000139443 Krtap5-2Q9D5Z7 189 aa5.59□□□□□ -1.51
Hmgb1-208ENSMUST00000139443 Gm3880A0A1B0GSB3 72 aa5.56□□□□□ -1.52
Hmgb1-208ENSMUST00000139443 Lce1kJ3QP15 125 aa5.55□□□□□ -1.52
Hmgb1-208ENSMUST00000139443 H2al1kJ3QP08 105 aa5.54□□□□□ -1.52
Hmgb1-208ENSMUST00000139443 H2al1mQ9DAD9 105 aa5.53□□□□□ -1.52
Hmgb1-208ENSMUST00000139443 Gm11559Q9D3H7 191 aa5.52□□□□□ -1.53
Hmgb1-208ENSMUST00000139443 Lce3bQ9CQM7 98 aa5.47□□□□□ -1.53
Hmgb1-208ENSMUST00000139443 A030005L19RikA0A1Y7VIU2 113 aa5.44□□□□□ -1.54
Hmgb1-208ENSMUST00000139443 Gm11554B1AQB2 190 aa5.42□□□□□ -1.54
Hmgb1-208ENSMUST00000139443 Gm12216A0A1W2P827 62 aa5.37□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Gm10272F7CZ33 110 aa5.37□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms