RNA–Protein interactions for RNA: ENSMUST00000105490.2

Prdm1-202, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prdm1, Length 4,025 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-202ENSMUST00000105490 Vps13dB1ART2 4390 aa4.95□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Stard9Q80TF6 4561 aa4.95□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Dync2h1Q45VK7 4306 aa4.95□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Krtap19-5O08632 62 aa4.94□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Crct1Q6PAI5 102 aa4.94□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Lrp1Q91ZX7 4545 aaKnown RBP4.94□□□□□ -1.62
Prdm1-202ENSMUST00000105490 Dnah2P0C6F1 4456 aa4.89□□□□□ -1.63
Prdm1-202ENSMUST00000105490 Dnah7aE9Q0T8 4024 aa4.88□□□□□ -1.63
Prdm1-202ENSMUST00000105490 Gm19402J3QJV4 266 aa4.85□□□□□ -1.63
Prdm1-202ENSMUST00000105490 Gm17402F6Z0L5 76 aa4.85□□□□□ -1.63
Prdm1-202ENSMUST00000105490 Fat3Q8BNA6 4555 aa4.84□□□□□ -1.63
Prdm1-202ENSMUST00000105490 Ryr3A2AGL3 4863 aa4.84□□□□□ -1.64
Prdm1-202ENSMUST00000105490 Dync1h1Q9JHU4 4644 aaKnown RBP4.79□□□□□ -1.64
Prdm1-202ENSMUST00000105490 Fat1A0A1L1SQU7 4645 aa4.74□□□□□ -1.65
Prdm1-202ENSMUST00000105490 Pkd1O08852 4293 aa4.73□□□□□ -1.65
Prdm1-202ENSMUST00000105490 Mycbp2Q7TPH6 4711 aa4.73□□□□□ -1.65
Prdm1-202ENSMUST00000105490 Ryr1E9PZQ0 5035 aa4.71□□□□□ -1.65
Prdm1-202ENSMUST00000105490 SacsQ9JLC8 4582 aa4.7□□□□□ -1.66
Prdm1-202ENSMUST00000105490 HydinQ80W93 5154 aa4.7□□□□□ -1.66
Prdm1-202ENSMUST00000105490 Sprr2a3Q4KL71 83 aa4.62□□□□□ -1.67
Prdm1-202ENSMUST00000105490 Sprr2a1Q9CQK8 83 aa4.62□□□□□ -1.67
Prdm1-202ENSMUST00000105490 Lrp2A2ARV4 4660 aa4.61□□□□□ -1.67
Prdm1-202ENSMUST00000105490 Fat2Q5F226 4351 aa4.58□□□□□ -1.68
Prdm1-202ENSMUST00000105490 Krtap1-5A2A590 122 aa4.52□□□□□ -1.69
Prdm1-202ENSMUST00000105490 Ryr2E9Q401 4966 aaKnown RBP4.52□□□□□ -1.69
Prdm1-202ENSMUST00000105490 Pkhd1E9PZ36 4059 aa4.52□□□□□ -1.69
Prdm1-202ENSMUST00000105490 Kiaa1109A2AAE1 5005 aa4.48□□□□□ -1.69
Prdm1-202ENSMUST00000105490 Abca13Q5SSE9 5034 aa4.47□□□□□ -1.69
Prdm1-202ENSMUST00000105490 Herc2Q4U2R1 4836 aa4.45□□□□□ -1.7
Prdm1-202ENSMUST00000105490 Pkhd1l1Q80ZA4 4249 aa4.45□□□□□ -1.7
Prdm1-202ENSMUST00000105490 Kmt2cQ8BRH4 4903 aa4.42□□□□□ -1.7
Prdm1-202ENSMUST00000105490 Dnah8Q91XQ0 4731 aa4.39□□□□□ -1.71
Prdm1-202ENSMUST00000105490 Krtap1-4Q3V2D6 188 aa4.38□□□□□ -1.71
Prdm1-202ENSMUST00000105490 Krtap4-1Q3UUY3 169 aa4.28□□□□□ -1.72
Prdm1-202ENSMUST00000105490 4933428G20RikQ9D3X4 101 aa4.25□□□□□ -1.73
Prdm1-202ENSMUST00000105490 Krtap16-3Q8C1I6 86 aa4.25□□□□□ -1.73
Prdm1-202ENSMUST00000105490 Dnhd1D3Z2X2 4750 aa4.25□□□□□ -1.73
Prdm1-202ENSMUST00000105490 LorP18165 486 aa4.24□□□□□ -1.73
Prdm1-202ENSMUST00000105490 Krtap19-9aF8WH65 55 aa4.23□□□□□ -1.73
Prdm1-202ENSMUST00000105490 Krtap12-1Q9Z287 130 aa4.19□□□□□ -1.74
Prdm1-202ENSMUST00000105490 Birc6O88738 4882 aa4.18□□□□□ -1.74
Prdm1-202ENSMUST00000105490 PcloQ9QYX7 5068 aa4.17□□□□□ -1.74
Prdm1-202ENSMUST00000105490 Krtap19-3Q925H6 87 aa4.15□□□□□ -1.74
Prdm1-202ENSMUST00000105490 Krtap19-9bQ99NG9 58 aa4.14□□□□□ -1.75
Prdm1-202ENSMUST00000105490 Krtap31-2Q8CAY5 177 aa4.13□□□□□ -1.75
Prdm1-202ENSMUST00000105490 A0A1Y7VJH8 109 aa4.12□□□□□ -1.75
Prdm1-202ENSMUST00000105490 Krtap19-1Q925H2 87 aa4.11□□□□□ -1.75
Prdm1-202ENSMUST00000105490 Gm6358A0A087WPH4 74 aa4.09□□□□□ -1.75
Prdm1-202ENSMUST00000105490 Syne1Q6ZWR6 8799 aa4.09□□□□□ -1.75
Prdm1-202ENSMUST00000105490 Ubr4A2AN08 5180 aa4.07□□□□□ -1.76
Prdm1-202ENSMUST00000105490 Herc1E9PZP8 4859 aa4.07□□□□□ -1.76
Prdm1-202ENSMUST00000105490 Lce1jD3YUU5 139 aa4.06□□□□□ -1.76
Prdm1-202ENSMUST00000105490 Krtap31-1Q9D644 177 aa4.05□□□□□ -1.76
Prdm1-202ENSMUST00000105490 Krtap28-10A0A1Y7VP58 119 aa4.03□□□□□ -1.76
Prdm1-202ENSMUST00000105490 A0A1Y7VLE6 161 aa4.03□□□□□ -1.76
Prdm1-202ENSMUST00000105490 Gm11563B1AQ90 168 aa3.99□□□□□ -1.77
Prdm1-202ENSMUST00000105490 Krtap4-7Q9D732 168 aa3.99□□□□□ -1.77
Prdm1-202ENSMUST00000105490 Fat4Q2PZL6 4981 aa3.99□□□□□ -1.77
Prdm1-202ENSMUST00000105490 2310046K23RikA0A0A6YVW6 87 aa3.98□□□□□ -1.77
Prdm1-202ENSMUST00000105490 Lce1mQ9CR91 182 aa3.98□□□□□ -1.77
Prdm1-202ENSMUST00000105490 Krtap8-1O08633 61 aa3.98□□□□□ -1.77
Prdm1-202ENSMUST00000105490 Gm18596A0A1W2P860 280 aa3.96□□□□□ -1.78
Prdm1-202ENSMUST00000105490 Gm7544A0A1Y7VJ58 118 aa3.94□□□□□ -1.78
Prdm1-202ENSMUST00000105490 Ush2AQ2QI47 5193 aa3.92□□□□□ -1.78
Prdm1-202ENSMUST00000105490 A030005L19RikA0A1Y7VIU2 113 aa3.91□□□□□ -1.78
Prdm1-202ENSMUST00000105490 Krtap9-5A2A5X3 358 aa3.89□□□□□ -1.79
Prdm1-202ENSMUST00000105490 Muc16A0A140LJ72 8478 aa3.89□□□□□ -1.79
Prdm1-202ENSMUST00000105490 Mdn1A2ANY6 5589 aaKnown RBP3.87□□□□□ -1.79
Prdm1-202ENSMUST00000105490 ZanO88799 5376 aa3.86□□□□□ -1.79
Prdm1-202ENSMUST00000105490 Hmcn2A2AJ76 5100 aa3.84□□□□□ -1.79
Prdm1-202ENSMUST00000105490 Krtap1-3A2A588 173 aa3.83□□□□□ -1.8
Prdm1-202ENSMUST00000105490 4932415D10RikA0A1W2P6U8 4986 aa3.81□□□□□ -1.8
Prdm1-202ENSMUST00000105490 Krtap9-3Q3V2C1 136 aa3.81□□□□□ -1.8
Prdm1-202ENSMUST00000105490 Gm10272F7CZ33 110 aa3.8□□□□□ -1.8
Prdm1-202ENSMUST00000105490 Krtap17-1A2A5X6 109 aa3.79□□□□□ -1.8
Prdm1-202ENSMUST00000105490 Gm10100J3QK64 120 aa3.79□□□□□ -1.8
Prdm1-202ENSMUST00000105490 Krtap4-2B1AQ85 167 aa3.77□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Rnf213E9Q555 5152 aaKnown RBP3.77□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Gm11555B1AQ89 175 aa3.75□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Krtap19-2Q925I0 141 aa3.74□□□□□ -1.81
Prdm1-202ENSMUST00000105490 A030005K14RikA0A1Y7VNY1 122 aa3.73□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Lce1hQ9D6R3 140 aa3.73□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Mt2P02798 61 aa3.72□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Lce1iQ9D6P5 149 aa3.72□□□□□ -1.81
Prdm1-202ENSMUST00000105490 Gm9789Q8BIG3 52 aa3.71□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Lce1a2Q9D1K4 149 aa3.7□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Prm1P02319 51 aa3.7□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Gm7735D3YX18 52 aa3.69□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Lce3bQ9CQM7 98 aa3.67□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Krtap28-13A0A087WQP5 138 aa3.66□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Gm10142J3KMP7 120 aa3.66□□□□□ -1.82
Prdm1-202ENSMUST00000105490 Lce1bQ9D149 137 aa3.65□□□□□ -1.83
Prdm1-202ENSMUST00000105490 Lce1dQ9D731 133 aa3.63□□□□□ -1.83
Prdm1-202ENSMUST00000105490 Lce3cQ91V05 98 aa3.59□□□□□ -1.83
Prdm1-202ENSMUST00000105490 Sprr2gO70558 76 aa3.58□□□□□ -1.84
Prdm1-202ENSMUST00000105490 A030003K21RikA0A1Y7VIM3 128 aa3.55□□□□□ -1.84
Prdm1-202ENSMUST00000105490 Gm6217A0A1Y7VJK9 128 aa3.55□□□□□ -1.84
Prdm1-202ENSMUST00000105490 Krtap22-2J3QNX6 67 aa3.54□□□□□ -1.84
Prdm1-202ENSMUST00000105490 Lce3dE9Q8V1 98 aa3.54□□□□□ -1.84
Prdm1-202ENSMUST00000105490 Gm11938Q9D3H4 131 aa3.49□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms