RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Stard9Q80TF6 4561 aa5.88□□□□□ -1.47
Chd3-201ENSMUST00000092971 BsnO88737 3942 aa5.87□□□□□ -1.47
Chd3-201ENSMUST00000092971 Lce3cQ91V05 98 aa5.86□□□□□ -1.47
Chd3-201ENSMUST00000092971 PlecQ9QXS1 4691 aaKnown RBP5.83□□□□□ -1.48
Chd3-201ENSMUST00000092971 Gm10100J3QK64 120 aa5.8□□□□□ -1.48
Chd3-201ENSMUST00000092971 Gm10272F7CZ33 110 aa5.78□□□□□ -1.48
Chd3-201ENSMUST00000092971 Vps13dB1ART2 4390 aa5.78□□□□□ -1.48
Chd3-201ENSMUST00000092971 Xirp2Q4U4S6 3784 aa5.74□□□□□ -1.49
Chd3-201ENSMUST00000092971 Lce1mQ9CR91 182 aa5.7□□□□□ -1.5
Chd3-201ENSMUST00000092971 Lce3eF8VQJ0 98 aa5.67□□□□□ -1.5
Chd3-201ENSMUST00000092971 Lce3fQ6PAI4 98 aa5.67□□□□□ -1.5
Chd3-201ENSMUST00000092971 Dnah11E9Q7N9 4488 aa5.67□□□□□ -1.5
Chd3-201ENSMUST00000092971 Krtap9-5A2A5X3 358 aa5.67□□□□□ -1.5
Chd3-201ENSMUST00000092971 2310046K23RikA0A0A6YVW6 87 aa5.64□□□□□ -1.51
Chd3-201ENSMUST00000092971 SacsQ9JLC8 4582 aa5.63□□□□□ -1.51
Chd3-201ENSMUST00000092971 Dnah17Q69Z23 4481 aa5.62□□□□□ -1.51
Chd3-201ENSMUST00000092971 Gm10142J3KMP7 120 aa5.62□□□□□ -1.51
Chd3-201ENSMUST00000092971 Gm38119A0A0A6YX29 146 aa5.62□□□□□ -1.51
Chd3-201ENSMUST00000092971 Dnah2P0C6F1 4456 aa5.61□□□□□ -1.51
Chd3-201ENSMUST00000092971 Lce1jD3YUU5 139 aa5.58□□□□□ -1.52
Chd3-201ENSMUST00000092971 Lce1gQ9D195 139 aa5.58□□□□□ -1.52
Chd3-201ENSMUST00000092971 Lce1iQ9D6P5 149 aa5.58□□□□□ -1.52
Chd3-201ENSMUST00000092971 Lce1hQ9D6R3 140 aa5.58□□□□□ -1.52
Chd3-201ENSMUST00000092971 ApobE9Q414 4505 aa5.57□□□□□ -1.52
Chd3-201ENSMUST00000092971 Mycbp2Q7TPH6 4711 aa5.56□□□□□ -1.52
Chd3-201ENSMUST00000092971 Lce3dE9Q8V1 98 aa5.55□□□□□ -1.52
Chd3-201ENSMUST00000092971 Ryr1E9PZQ0 5035 aa5.55□□□□□ -1.52
Chd3-201ENSMUST00000092971 Dnah9B1AR51 4484 aa5.51□□□□□ -1.53
Chd3-201ENSMUST00000092971 Lce3aQ497I5 98 aa5.5□□□□□ -1.53
Chd3-201ENSMUST00000092971 Dnah7bL7N1Y0 4068 aa5.49□□□□□ -1.53
Chd3-201ENSMUST00000092971 Sprr2iO70560 76 aa5.47□□□□□ -1.53
Chd3-201ENSMUST00000092971 Fat1A0A1L1SQU7 4645 aa5.45□□□□□ -1.54
Chd3-201ENSMUST00000092971 Krtap16-3Q8C1I6 86 aa5.45□□□□□ -1.54
Chd3-201ENSMUST00000092971 Krtap19-3Q925H6 87 aa5.42□□□□□ -1.54
Chd3-201ENSMUST00000092971 Dync1h1Q9JHU4 4644 aaKnown RBP5.4□□□□□ -1.54
Chd3-201ENSMUST00000092971 Dnah6E9Q0B6 4144 aa5.39□□□□□ -1.55
Chd3-201ENSMUST00000092971 Lrp1bQ9JI18 4599 aa5.39□□□□□ -1.55
Chd3-201ENSMUST00000092971 Dync2h1Q45VK7 4306 aa5.37□□□□□ -1.55
Chd3-201ENSMUST00000092971 TnxbO35452 4006 aa5.37□□□□□ -1.55
Chd3-201ENSMUST00000092971 Krtap22-2J3QNX6 67 aa5.34□□□□□ -1.55
Chd3-201ENSMUST00000092971 Mt2P02798 61 aa5.33□□□□□ -1.56
Chd3-201ENSMUST00000092971 Gm10024A0A0A0MQA4 119 aa5.31□□□□□ -1.56
Chd3-201ENSMUST00000092971 Sprr2eO70556 76 aa5.3□□□□□ -1.56
Chd3-201ENSMUST00000092971 Kmt2aP55200 3966 aa5.29□□□□□ -1.56
Chd3-201ENSMUST00000092971 Sprr2fO70557 76 aa5.28□□□□□ -1.56
Chd3-201ENSMUST00000092971 Lce1fB9EJP6 147 aa5.26□□□□□ -1.57
Chd3-201ENSMUST00000092971 Lce1cQ9D1C5 147 aa5.26□□□□□ -1.57
Chd3-201ENSMUST00000092971 Lce1lQ9D1G7 135 aa5.26□□□□□ -1.57
Chd3-201ENSMUST00000092971 Lce1dQ9D731 133 aa5.26□□□□□ -1.57
Chd3-201ENSMUST00000092971 Lrp1Q91ZX7 4545 aaKnown RBP5.26□□□□□ -1.57
Chd3-201ENSMUST00000092971 Lce1bQ9D149 137 aa5.25□□□□□ -1.57
Chd3-201ENSMUST00000092971 Vps13bQ80TY5 3993 aa5.24□□□□□ -1.57
Chd3-201ENSMUST00000092971 Dnah8Q91XQ0 4731 aa5.24□□□□□ -1.57
Chd3-201ENSMUST00000092971 Hectd4E9Q2E4 4418 aa5.24□□□□□ -1.57
Chd3-201ENSMUST00000092971 Krtap19-1Q925H2 87 aa5.23□□□□□ -1.57
Chd3-201ENSMUST00000092971 PrkdcP97313 4128 aa5.23□□□□□ -1.57
Chd3-201ENSMUST00000092971 Fat3Q8BNA6 4555 aa5.23□□□□□ -1.57
Chd3-201ENSMUST00000092971 Dnah1E9Q8T7 4250 aa5.2□□□□□ -1.58
Chd3-201ENSMUST00000092971 Lce1eQ9D139 143 aa5.18□□□□□ -1.58
Chd3-201ENSMUST00000092971 HydinQ80W93 5154 aa5.16□□□□□ -1.58
Chd3-201ENSMUST00000092971 Krtap19-2Q925I0 141 aa5.06□□□□□ -1.6
Chd3-201ENSMUST00000092971 Dnah3Q8BW94 4083 aa5.04□□□□□ -1.6
Chd3-201ENSMUST00000092971 Lrp2A2ARV4 4660 aa5.03□□□□□ -1.6
Chd3-201ENSMUST00000092971 Ryr3A2AGL3 4863 aa5□□□□□ -1.61
Chd3-201ENSMUST00000092971 Pkd1O08852 4293 aa4.99□□□□□ -1.61
Chd3-201ENSMUST00000092971 Dnhd1D3Z2X2 4750 aa4.98□□□□□ -1.61
Chd3-201ENSMUST00000092971 Prm1P02319 51 aa4.97□□□□□ -1.61
Chd3-201ENSMUST00000092971 Kmt2cQ8BRH4 4903 aa4.95□□□□□ -1.62
Chd3-201ENSMUST00000092971 Krtap1-3A2A588 173 aa4.94□□□□□ -1.62
Chd3-201ENSMUST00000092971 PcloQ9QYX7 5068 aa4.91□□□□□ -1.62
Chd3-201ENSMUST00000092971 Mt4P47945 62 aa4.9□□□□□ -1.62
Chd3-201ENSMUST00000092971 Herc2Q4U2R1 4836 aa4.9□□□□□ -1.63
Chd3-201ENSMUST00000092971 Krtap9-3Q3V2C1 136 aa4.89□□□□□ -1.63
Chd3-201ENSMUST00000092971 Syne1Q6ZWR6 8799 aa4.89□□□□□ -1.63
Chd3-201ENSMUST00000092971 Fat2Q5F226 4351 aa4.88□□□□□ -1.63
Chd3-201ENSMUST00000092971 Fras1Q80T14 4010 aa4.86□□□□□ -1.63
Chd3-201ENSMUST00000092971 Kiaa1109A2AAE1 5005 aa4.86□□□□□ -1.63
Chd3-201ENSMUST00000092971 Dnah7cA0A087WR13 4024 aa4.85□□□□□ -1.63
Chd3-201ENSMUST00000092971 Krtap19-4Q925H7 84 aa4.83□□□□□ -1.64
Chd3-201ENSMUST00000092971 Gm11569B1AQB1 180 aa4.81□□□□□ -1.64
Chd3-201ENSMUST00000092971 Dnah7aE9Q0T8 4024 aa4.8□□□□□ -1.64
Chd3-201ENSMUST00000092971 Gm7735D3YX18 52 aa4.79□□□□□ -1.64
Chd3-201ENSMUST00000092971 Ryr2E9Q401 4966 aaKnown RBP4.77□□□□□ -1.65
Chd3-201ENSMUST00000092971 Mdn1A2ANY6 5589 aaKnown RBP4.75□□□□□ -1.65
Chd3-201ENSMUST00000092971 Gm10061D3Z714 54 aa4.73□□□□□ -1.65
Chd3-201ENSMUST00000092971 Pkhd1E9PZ36 4059 aa4.69□□□□□ -1.66
Chd3-201ENSMUST00000092971 Krtap4-6Q3V4B7 195 aa4.67□□□□□ -1.66
Chd3-201ENSMUST00000092971 Gm9789Q8BIG3 52 aa4.65□□□□□ -1.66
Chd3-201ENSMUST00000092971 Sprr2dO70555 85 aa4.65□□□□□ -1.67
Chd3-201ENSMUST00000092971 Krtap4-2B1AQ85 167 aa4.64□□□□□ -1.67
Chd3-201ENSMUST00000092971 Krtap31-1Q9D644 177 aa4.63□□□□□ -1.67
Chd3-201ENSMUST00000092971 Lce1a2Q9D1K4 149 aa4.57□□□□□ -1.68
Chd3-201ENSMUST00000092971 Herc1E9PZP8 4859 aa4.57□□□□□ -1.68
Chd3-201ENSMUST00000092971 Birc6O88738 4882 aa4.48□□□□□ -1.69
Chd3-201ENSMUST00000092971 Sprr2hO70559 108 aa4.48□□□□□ -1.69
Chd3-201ENSMUST00000092971 2300003K06RikA2A4M0 262 aa4.44□□□□□ -1.7
Chd3-201ENSMUST00000092971 Krtap4-16Q91W93 202 aa4.43□□□□□ -1.7
Chd3-201ENSMUST00000092971 Ubr4A2AN08 5180 aa4.42□□□□□ -1.7
Chd3-201ENSMUST00000092971 Krtap4-1Q3UUY3 169 aa4.41□□□□□ -1.7
Chd3-201ENSMUST00000092971 Krtap17-1A2A5X6 109 aa4.39□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms