RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Dnah7bL7N1Y0 4068 aa6.01□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Gm19402J3QJV4 266 aa6□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Dnah11E9Q7N9 4488 aa5.99□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Lce1mQ9CR91 182 aa5.97□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Krtap12-1Q9Z287 130 aa5.97□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Dnah9B1AR51 4484 aa5.97□□□□□ -1.45
Col2a1-202ENSMUST00000088355 Mycbp2Q7TPH6 4711 aa5.96□□□□□ -1.46
Col2a1-202ENSMUST00000088355 TnxbO35452 4006 aa5.96□□□□□ -1.46
Col2a1-202ENSMUST00000088355 Krtap7-1Q9D3I6 87 aa5.95□□□□□ -1.46
Col2a1-202ENSMUST00000088355 Sprr2kO70562 68 aa5.93□□□□□ -1.46
Col2a1-202ENSMUST00000088355 Krtap19-9bQ99NG9 58 aa5.93□□□□□ -1.46
Col2a1-202ENSMUST00000088355 SacsQ9JLC8 4582 aa5.9□□□□□ -1.47
Col2a1-202ENSMUST00000088355 Dync1h1Q9JHU4 4644 aaKnown RBP5.89□□□□□ -1.47
Col2a1-202ENSMUST00000088355 Dync2h1Q45VK7 4306 aa5.89□□□□□ -1.47
Col2a1-202ENSMUST00000088355 PrkdcP97313 4128 aa5.88□□□□□ -1.47
Col2a1-202ENSMUST00000088355 ApobE9Q414 4505 aa5.87□□□□□ -1.47
Col2a1-202ENSMUST00000088355 Kmt2aP55200 3966 aa5.8□□□□□ -1.48
Col2a1-202ENSMUST00000088355 Lrp1bQ9JI18 4599 aa5.79□□□□□ -1.48
Col2a1-202ENSMUST00000088355 Dnah2P0C6F1 4456 aa5.79□□□□□ -1.48
Col2a1-202ENSMUST00000088355 Ryr3A2AGL3 4863 aa5.78□□□□□ -1.48
Col2a1-202ENSMUST00000088355 Dnah6E9Q0B6 4144 aa5.76□□□□□ -1.49
Col2a1-202ENSMUST00000088355 Prm1P02319 51 aa5.74□□□□□ -1.49
Col2a1-202ENSMUST00000088355 HydinQ80W93 5154 aa5.7□□□□□ -1.5
Col2a1-202ENSMUST00000088355 Fat1A0A1L1SQU7 4645 aa5.65□□□□□ -1.5
Col2a1-202ENSMUST00000088355 Kiaa1109A2AAE1 5005 aa5.65□□□□□ -1.5
Col2a1-202ENSMUST00000088355 Sprr2gO70558 76 aa5.65□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Dnah3Q8BW94 4083 aa5.65□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Krtap19-3Q925H6 87 aa5.65□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Krtap16-3Q8C1I6 86 aa5.64□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Pkd1O08852 4293 aa5.64□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Dnah1E9Q8T7 4250 aa5.63□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Herc2Q4U2R1 4836 aa5.63□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Dnah8Q91XQ0 4731 aa5.62□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Lrp1Q91ZX7 4545 aaKnown RBP5.59□□□□□ -1.51
Col2a1-202ENSMUST00000088355 Krtap9-5A2A5X3 358 aa5.58□□□□□ -1.52
Col2a1-202ENSMUST00000088355 Fat3Q8BNA6 4555 aa5.57□□□□□ -1.52
Col2a1-202ENSMUST00000088355 Lrp2A2ARV4 4660 aa5.56□□□□□ -1.52
Col2a1-202ENSMUST00000088355 Krtap19-1Q925H2 87 aa5.54□□□□□ -1.52
Col2a1-202ENSMUST00000088355 Gm7735D3YX18 52 aa5.5□□□□□ -1.53
Col2a1-202ENSMUST00000088355 Hectd4E9Q2E4 4418 aa5.49□□□□□ -1.53
Col2a1-202ENSMUST00000088355 Dnhd1D3Z2X2 4750 aa5.44□□□□□ -1.54
Col2a1-202ENSMUST00000088355 Ryr2E9Q401 4966 aaKnown RBP5.43□□□□□ -1.54
Col2a1-202ENSMUST00000088355 Fras1Q80T14 4010 aa5.41□□□□□ -1.54
Col2a1-202ENSMUST00000088355 Dnah7cA0A087WR13 4024 aa5.39□□□□□ -1.55
Col2a1-202ENSMUST00000088355 Lce3bQ9CQM7 98 aa5.37□□□□□ -1.55
Col2a1-202ENSMUST00000088355 Gm9789Q8BIG3 52 aa5.35□□□□□ -1.55
Col2a1-202ENSMUST00000088355 Dnah7aE9Q0T8 4024 aa5.34□□□□□ -1.55
Col2a1-202ENSMUST00000088355 Krtap22-2J3QNX6 67 aa5.31□□□□□ -1.56
Col2a1-202ENSMUST00000088355 PcloQ9QYX7 5068 aa5.3□□□□□ -1.56
Col2a1-202ENSMUST00000088355 Krtap1-3A2A588 173 aa5.29□□□□□ -1.56
Col2a1-202ENSMUST00000088355 Mt2P02798 61 aa5.29□□□□□ -1.56
Col2a1-202ENSMUST00000088355 Vps13bQ80TY5 3993 aa5.28□□□□□ -1.56
Col2a1-202ENSMUST00000088355 Krtap19-2Q925I0 141 aa5.26□□□□□ -1.57
Col2a1-202ENSMUST00000088355 Lce3cQ91V05 98 aa5.25□□□□□ -1.57
Col2a1-202ENSMUST00000088355 Gm10272F7CZ33 110 aa5.25□□□□□ -1.57
Col2a1-202ENSMUST00000088355 Fat2Q5F226 4351 aa5.21□□□□□ -1.58
Col2a1-202ENSMUST00000088355 Kmt2cQ8BRH4 4903 aa5.21□□□□□ -1.58
Col2a1-202ENSMUST00000088355 Gm10100J3QK64 120 aa5.17□□□□□ -1.58
Col2a1-202ENSMUST00000088355 2310046K23RikA0A0A6YVW6 87 aa5.16□□□□□ -1.58
Col2a1-202ENSMUST00000088355 Gm10061D3Z714 54 aa5.14□□□□□ -1.59
Col2a1-202ENSMUST00000088355 Gm38119A0A0A6YX29 146 aa5.14□□□□□ -1.59
Col2a1-202ENSMUST00000088355 Mdn1A2ANY6 5589 aaKnown RBP5.13□□□□□ -1.59
Col2a1-202ENSMUST00000088355 Herc1E9PZP8 4859 aa5.13□□□□□ -1.59
Col2a1-202ENSMUST00000088355 Abca13Q5SSE9 5034 aa5.1□□□□□ -1.59
Col2a1-202ENSMUST00000088355 Lce1jD3YUU5 139 aa5.08□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Lce3eF8VQJ0 98 aa5.07□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Lce3fQ6PAI4 98 aa5.07□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Birc6O88738 4882 aa5.06□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Sprr2iO70560 76 aa5.06□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Gm11569B1AQB1 180 aa5.03□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Lce3dE9Q8V1 98 aa5.03□□□□□ -1.6
Col2a1-202ENSMUST00000088355 Gm10142J3KMP7 120 aa4.99□□□□□ -1.61
Col2a1-202ENSMUST00000088355 Pkhd1E9PZ36 4059 aa4.99□□□□□ -1.61
Col2a1-202ENSMUST00000088355 Lce3aQ497I5 98 aa4.92□□□□□ -1.62
Col2a1-202ENSMUST00000088355 Lce1gQ9D195 139 aa4.86□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1iQ9D6P5 149 aa4.86□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1hQ9D6R3 140 aa4.86□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Syne1Q6ZWR6 8799 aa4.86□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Pkhd1l1Q80ZA4 4249 aa4.85□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1fB9EJP6 147 aa4.85□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1cQ9D1C5 147 aa4.85□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1lQ9D1G7 135 aa4.85□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1dQ9D731 133 aa4.85□□□□□ -1.63
Col2a1-202ENSMUST00000088355 Lce1bQ9D149 137 aa4.84□□□□□ -1.63
Col2a1-202ENSMUST00000088355 4932415D10RikA0A1W2P6U8 4986 aa4.84□□□□□ -1.64
Col2a1-202ENSMUST00000088355 Krtap4-2B1AQ85 167 aa4.83□□□□□ -1.64
Col2a1-202ENSMUST00000088355 Ubr4A2AN08 5180 aa4.81□□□□□ -1.64
Col2a1-202ENSMUST00000088355 Krtap9-3Q3V2C1 136 aa4.8□□□□□ -1.64
Col2a1-202ENSMUST00000088355 Mt4P47945 62 aa4.73□□□□□ -1.65
Col2a1-202ENSMUST00000088355 Krtap4-6Q3V4B7 195 aa4.72□□□□□ -1.65
Col2a1-202ENSMUST00000088355 Fat4Q2PZL6 4981 aa4.71□□□□□ -1.65
Col2a1-202ENSMUST00000088355 Lce1eQ9D139 143 aa4.71□□□□□ -1.65
Col2a1-202ENSMUST00000088355 Rnf213E9Q555 5152 aaKnown RBP4.7□□□□□ -1.66
Col2a1-202ENSMUST00000088355 Sprr2fO70557 76 aa4.7□□□□□ -1.66
Col2a1-202ENSMUST00000088355 Sprr2eO70556 76 aa4.67□□□□□ -1.66
Col2a1-202ENSMUST00000088355 Krtap19-4Q925H7 84 aa4.64□□□□□ -1.67
Col2a1-202ENSMUST00000088355 ZanO88799 5376 aa4.63□□□□□ -1.67
Col2a1-202ENSMUST00000088355 Gm10024A0A0A0MQA4 119 aa4.61□□□□□ -1.67
Col2a1-202ENSMUST00000088355 Ush2AQ2QI47 5193 aa4.6□□□□□ -1.67
Col2a1-202ENSMUST00000088355 Lce1a2Q9D1K4 149 aa4.57□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms