RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Krtap3-1A2A591 98 aa4.79□□□□□ -1.64
Hmgb1-201ENSMUST00000085546 Pkhd1l1Q80ZA4 4249 aa4.77□□□□□ -1.65
Hmgb1-201ENSMUST00000085546 Fat2Q5F226 4351 aa4.76□□□□□ -1.65
Hmgb1-201ENSMUST00000085546 Camk2n1Q6QWF9 78 aa4.75□□□□□ -1.65
Hmgb1-201ENSMUST00000085546 Gm17416Q30KP4 66 aa4.75□□□□□ -1.65
Hmgb1-201ENSMUST00000085546 FcgbpE9Q0B5 2583 aa4.73□□□□□ -1.65
Hmgb1-201ENSMUST00000085546 Gm5767A0A0J9YTU8 78 aa4.7□□□□□ -1.66
Hmgb1-201ENSMUST00000085546 Gm17402F6Z0L5 76 aa4.67□□□□□ -1.66
Hmgb1-201ENSMUST00000085546 Gm9507D3Z5T3 223 aa4.65□□□□□ -1.66
Hmgb1-201ENSMUST00000085546 Krtap13-1Q8K198 168 aa4.61□□□□□ -1.67
Hmgb1-201ENSMUST00000085546 Defb10Q8R2I8 73 aa4.59□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 Krtap10-4Q08EG8 221 aa4.56□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 Lrp1Q91ZX7 4545 aaKnown RBP4.56□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 BC029722A0A0N4SW31 51 aa4.55□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 A0A1Y7VJ07 166 aa4.54□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 Gm19402J3QJV4 266 aa4.53□□□□□ -1.68
Hmgb1-201ENSMUST00000085546 Fat3Q8BNA6 4555 aa4.5□□□□□ -1.69
Hmgb1-201ENSMUST00000085546 Sprr2a3Q4KL71 83 aa4.48□□□□□ -1.69
Hmgb1-201ENSMUST00000085546 Sprr2a1Q9CQK8 83 aa4.48□□□□□ -1.69
Hmgb1-201ENSMUST00000085546 Fat1A0A1L1SQU7 4645 aa4.46□□□□□ -1.69
Hmgb1-201ENSMUST00000085546 Dync1h1Q9JHU4 4644 aaKnown RBP4.46□□□□□ -1.7
Hmgb1-201ENSMUST00000085546 Krtap4-1Q3UUY3 169 aa4.44□□□□□ -1.7
Hmgb1-201ENSMUST00000085546 A030003K21RikA0A1Y7VIM3 128 aa4.35□□□□□ -1.71
Hmgb1-201ENSMUST00000085546 Gm2696A0A1W2P709 240 aa4.33□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 A030014E15RikA0A1Y7VJV2 120 aa4.33□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 Tnp1P10856 55 aa4.32□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 Mycbp2Q7TPH6 4711 aa4.32□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 Gm6217A0A1Y7VJK9 128 aa4.29□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 Krtap31-2Q8CAY5 177 aa4.29□□□□□ -1.72
Hmgb1-201ENSMUST00000085546 Gm11555B1AQ89 175 aa4.24□□□□□ -1.73
Hmgb1-201ENSMUST00000085546 Krtap1-5A2A590 122 aa4.2□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 A0A286YCP9 139 aa4.19□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 Spink7Q6IE32 76 aa4.19□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 Dnah8Q91XQ0 4731 aa4.19□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 Gm9736A0A1W2P7N1 277 aa4.18□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 Krtap31-1Q9D644 177 aa4.18□□□□□ -1.74
Hmgb1-201ENSMUST00000085546 2310046K23RikA0A0A6YVW6 87 aa4.13□□□□□ -1.75
Hmgb1-201ENSMUST00000085546 Gm11563B1AQ90 168 aa4.13□□□□□ -1.75
Hmgb1-201ENSMUST00000085546 Krtap4-7Q9D732 168 aa4.13□□□□□ -1.75
Hmgb1-201ENSMUST00000085546 Krtap19-5O08632 62 aa4.08□□□□□ -1.76
Hmgb1-201ENSMUST00000085546 Ryr1E9PZQ0 5035 aa4.04□□□□□ -1.76
Hmgb1-201ENSMUST00000085546 Kmt2cQ8BRH4 4903 aa3.97□□□□□ -1.77
Hmgb1-201ENSMUST00000085546 Krtap17-1A2A5X6 109 aa3.96□□□□□ -1.78
Hmgb1-201ENSMUST00000085546 Lce1mQ9CR91 182 aa3.96□□□□□ -1.78
Hmgb1-201ENSMUST00000085546 Ryr2E9Q401 4966 aaKnown RBP3.88□□□□□ -1.79
Hmgb1-201ENSMUST00000085546 Lrp2A2ARV4 4660 aa3.88□□□□□ -1.79
Hmgb1-201ENSMUST00000085546 Ryr3A2AGL3 4863 aa3.86□□□□□ -1.79
Hmgb1-201ENSMUST00000085546 Krtap1-4Q3V2D6 188 aa3.85□□□□□ -1.79
Hmgb1-201ENSMUST00000085546 Lce1jD3YUU5 139 aa3.84□□□□□ -1.79
Hmgb1-201ENSMUST00000085546 Abca13Q5SSE9 5034 aa3.84□□□□□ -1.8
Hmgb1-201ENSMUST00000085546 Gm18596A0A1W2P860 280 aa3.78□□□□□ -1.8
Hmgb1-201ENSMUST00000085546 Lce1dQ9D731 133 aa3.78□□□□□ -1.8
Hmgb1-201ENSMUST00000085546 Krtap8-1O08633 61 aa3.78□□□□□ -1.8
Hmgb1-201ENSMUST00000085546 Herc1E9PZP8 4859 aa3.76□□□□□ -1.81
Hmgb1-201ENSMUST00000085546 LorP18165 486 aa3.76□□□□□ -1.81
Hmgb1-201ENSMUST00000085546 Krtap16-3Q8C1I6 86 aa3.75□□□□□ -1.81
Hmgb1-201ENSMUST00000085546 Krtap4-2B1AQ85 167 aa3.74□□□□□ -1.81
Hmgb1-201ENSMUST00000085546 4933428G20RikQ9D3X4 101 aa3.74□□□□□ -1.81
Hmgb1-201ENSMUST00000085546 Birc6O88738 4882 aa3.71□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Hmcn2A2AJ76 5100 aa3.69□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Dnhd1D3Z2X2 4750 aa3.67□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Gm10318A0A1W2P728 225 aa3.66□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Krtap19-1Q925H2 87 aa3.65□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Lce1hQ9D6R3 140 aa3.65□□□□□ -1.82
Hmgb1-201ENSMUST00000085546 Krtap19-9bQ99NG9 58 aa3.65□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Sprr2gO70558 76 aa3.64□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Herc2Q4U2R1 4836 aa3.64□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Lce1bQ9D149 137 aa3.63□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Krtap12-1Q9Z287 130 aa3.62□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Gm11938Q9D3H4 131 aa3.6□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Krtap19-9aF8WH65 55 aa3.59□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Krtap9-3Q3V2C1 136 aa3.59□□□□□ -1.83
Hmgb1-201ENSMUST00000085546 Crct1Q6PAI5 102 aa3.59□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 Krtap19-3Q925H6 87 aa3.59□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 HydinQ80W93 5154 aa3.57□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 Gm11562A0PK51 136 aa3.56□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 Lce1eQ9D139 143 aa3.54□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 PcloQ9QYX7 5068 aa3.53□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 Prm1P02319 51 aa3.53□□□□□ -1.84
Hmgb1-201ENSMUST00000085546 Sprr2dO70555 85 aa3.52□□□□□ -1.85
Hmgb1-201ENSMUST00000085546 Sprr2iO70560 76 aa3.52□□□□□ -1.85
Hmgb1-201ENSMUST00000085546 Gm7735D3YX18 52 aa3.49□□□□□ -1.85
Hmgb1-201ENSMUST00000085546 Kiaa1109A2AAE1 5005 aa3.48□□□□□ -1.85
Hmgb1-201ENSMUST00000085546 4932415D10RikA0A1W2P6U8 4986 aa3.46□□□□□ -1.86
Hmgb1-201ENSMUST00000085546 Ubr4A2AN08 5180 aa3.42□□□□□ -1.86
Hmgb1-201ENSMUST00000085546 Gm9789Q8BIG3 52 aa3.38□□□□□ -1.87
Hmgb1-201ENSMUST00000085546 Lce1a2Q9D1K4 149 aa3.36□□□□□ -1.87
Hmgb1-201ENSMUST00000085546 Lce1iQ9D6P5 149 aa3.36□□□□□ -1.87
Hmgb1-201ENSMUST00000085546 ZanO88799 5376 aa3.33□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Gm10272F7CZ33 110 aa3.32□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Sprr2fO70557 76 aa3.32□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Krtap1-3A2A588 173 aa3.31□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Fat4Q2PZL6 4981 aa3.31□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Ush2AQ2QI47 5193 aa3.29□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Gm11559Q9D3H7 191 aa3.28□□□□□ -1.88
Hmgb1-201ENSMUST00000085546 Gm10100J3QK64 120 aa3.22□□□□□ -1.89
Hmgb1-201ENSMUST00000085546 Lce1cQ9D1C5 147 aa3.22□□□□□ -1.89
Hmgb1-201ENSMUST00000085546 Sprr2eO70556 76 aa3.21□□□□□ -1.9
Hmgb1-201ENSMUST00000085546 Rnf213E9Q555 5152 aaKnown RBP3.2□□□□□ -1.9
Hmgb1-201ENSMUST00000085546 Gm10142J3KMP7 120 aa3.2□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms