RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Krtap12-1Q9Z287 130 aa5.66□□□□□ -1.5
Col18a1-201ENSMUST00000072755 TnxbO35452 4006 aa5.64□□□□□ -1.51
Col18a1-201ENSMUST00000072755 Xirp2Q4U4S6 3784 aa5.62□□□□□ -1.51
Col18a1-201ENSMUST00000072755 Dnah11E9Q7N9 4488 aa5.59□□□□□ -1.51
Col18a1-201ENSMUST00000072755 Dync1h1Q9JHU4 4644 aaKnown RBP5.59□□□□□ -1.51
Col18a1-201ENSMUST00000072755 Dnah1E9Q8T7 4250 aa5.57□□□□□ -1.52
Col18a1-201ENSMUST00000072755 Dnah3Q8BW94 4083 aa5.57□□□□□ -1.52
Col18a1-201ENSMUST00000072755 Dnah2P0C6F1 4456 aa5.55□□□□□ -1.52
Col18a1-201ENSMUST00000072755 Ryr1E9PZQ0 5035 aa5.54□□□□□ -1.52
Col18a1-201ENSMUST00000072755 Hspg2Q05793 3707 aaKnown RBP5.54□□□□□ -1.52
Col18a1-201ENSMUST00000072755 ApobE9Q414 4505 aa5.54□□□□□ -1.52
Col18a1-201ENSMUST00000072755 Dnah9B1AR51 4484 aa5.51□□□□□ -1.53
Col18a1-201ENSMUST00000072755 Lce1mQ9CR91 182 aa5.5□□□□□ -1.53
Col18a1-201ENSMUST00000072755 Pkd1O08852 4293 aa5.48□□□□□ -1.53
Col18a1-201ENSMUST00000072755 Csmd3Q80T79 3707 aa5.48□□□□□ -1.53
Col18a1-201ENSMUST00000072755 CubnQ9JLB4 3623 aa5.48□□□□□ -1.53
Col18a1-201ENSMUST00000072755 PrkdcP97313 4128 aa5.47□□□□□ -1.53
Col18a1-201ENSMUST00000072755 SacsQ9JLC8 4582 aa5.45□□□□□ -1.54
Col18a1-201ENSMUST00000072755 Kmt2aP55200 3966 aa5.44□□□□□ -1.54
Col18a1-201ENSMUST00000072755 Dnah7bL7N1Y0 4068 aa5.41□□□□□ -1.54
Col18a1-201ENSMUST00000072755 Sprr2gO70558 76 aa5.4□□□□□ -1.55
Col18a1-201ENSMUST00000072755 Dnah6E9Q0B6 4144 aa5.36□□□□□ -1.55
Col18a1-201ENSMUST00000072755 Fat1A0A1L1SQU7 4645 aa5.35□□□□□ -1.55
Col18a1-201ENSMUST00000072755 Lrp1bQ9JI18 4599 aa5.35□□□□□ -1.55
Col18a1-201ENSMUST00000072755 Krtap16-3Q8C1I6 86 aa5.33□□□□□ -1.56
Col18a1-201ENSMUST00000072755 Krtap19-3Q925H6 87 aa5.32□□□□□ -1.56
Col18a1-201ENSMUST00000072755 Krtap9-5A2A5X3 358 aa5.28□□□□□ -1.56
Col18a1-201ENSMUST00000072755 Prm1P02319 51 aa5.25□□□□□ -1.57
Col18a1-201ENSMUST00000072755 Fras1Q80T14 4010 aa5.23□□□□□ -1.57
Col18a1-201ENSMUST00000072755 Mycbp2Q7TPH6 4711 aa5.22□□□□□ -1.57
Col18a1-201ENSMUST00000072755 Hectd4E9Q2E4 4418 aa5.21□□□□□ -1.58
Col18a1-201ENSMUST00000072755 Krtap19-1Q925H2 87 aa5.21□□□□□ -1.58
Col18a1-201ENSMUST00000072755 Dnah8Q91XQ0 4731 aa5.2□□□□□ -1.58
Col18a1-201ENSMUST00000072755 Fat3Q8BNA6 4555 aa5.17□□□□□ -1.58
Col18a1-201ENSMUST00000072755 Lce3bQ9CQM7 98 aa5.15□□□□□ -1.59
Col18a1-201ENSMUST00000072755 Ryr2E9Q401 4966 aaKnown RBP5.09□□□□□ -1.59
Col18a1-201ENSMUST00000072755 2310046K23RikA0A0A6YVW6 87 aa5.07□□□□□ -1.6
Col18a1-201ENSMUST00000072755 Dnhd1D3Z2X2 4750 aa5.04□□□□□ -1.6
Col18a1-201ENSMUST00000072755 Ryr3A2AGL3 4863 aa5.04□□□□□ -1.6
Col18a1-201ENSMUST00000072755 Gm10272F7CZ33 110 aa5.03□□□□□ -1.6
Col18a1-201ENSMUST00000072755 Dnah7aE9Q0T8 4024 aa5.02□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Herc2Q4U2R1 4836 aa5.02□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Gm7735D3YX18 52 aa5.02□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Lce3cQ91V05 98 aa5.02□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Dnah7cA0A087WR13 4024 aa5□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Mt2P02798 61 aa4.99□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Krtap22-2J3QNX6 67 aa4.99□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Herc1E9PZP8 4859 aa4.98□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Gm10100J3QK64 120 aa4.97□□□□□ -1.61
Col18a1-201ENSMUST00000072755 Kiaa1109A2AAE1 5005 aa4.96□□□□□ -1.62
Col18a1-201ENSMUST00000072755 Krtap1-3A2A588 173 aa4.95□□□□□ -1.62
Col18a1-201ENSMUST00000072755 Fat2Q5F226 4351 aa4.94□□□□□ -1.62
Col18a1-201ENSMUST00000072755 Krtap19-2Q925I0 141 aa4.94□□□□□ -1.62
Col18a1-201ENSMUST00000072755 Gm9789Q8BIG3 52 aa4.93□□□□□ -1.62
Col18a1-201ENSMUST00000072755 HydinQ80W93 5154 aa4.89□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Lce3eF8VQJ0 98 aa4.87□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Lce3fQ6PAI4 98 aa4.87□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Lrp1Q91ZX7 4545 aaKnown RBP4.86□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Lce3dE9Q8V1 98 aa4.86□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Gm10142J3KMP7 120 aa4.86□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Krtap31-1Q9D644 177 aa4.86□□□□□ -1.63
Col18a1-201ENSMUST00000072755 Gm38119A0A0A6YX29 146 aa4.83□□□□□ -1.64
Col18a1-201ENSMUST00000072755 Sprr2iO70560 76 aa4.83□□□□□ -1.64
Col18a1-201ENSMUST00000072755 Lce1jD3YUU5 139 aa4.81□□□□□ -1.64
Col18a1-201ENSMUST00000072755 Vps13bQ80TY5 3993 aa4.79□□□□□ -1.64
Col18a1-201ENSMUST00000072755 Gm10061D3Z714 54 aa4.75□□□□□ -1.65
Col18a1-201ENSMUST00000072755 Lrp2A2ARV4 4660 aa4.74□□□□□ -1.65
Col18a1-201ENSMUST00000072755 Lce3aQ497I5 98 aa4.74□□□□□ -1.65
Col18a1-201ENSMUST00000072755 Pkhd1l1Q80ZA4 4249 aa4.73□□□□□ -1.65
Col18a1-201ENSMUST00000072755 Gm11569B1AQB1 180 aa4.67□□□□□ -1.66
Col18a1-201ENSMUST00000072755 Krtap4-2B1AQ85 167 aa4.63□□□□□ -1.67
Col18a1-201ENSMUST00000072755 PcloQ9QYX7 5068 aa4.62□□□□□ -1.67
Col18a1-201ENSMUST00000072755 4932415D10RikA0A1W2P6U8 4986 aa4.62□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1gQ9D195 139 aa4.61□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1iQ9D6P5 149 aa4.61□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1hQ9D6R3 140 aa4.61□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Birc6O88738 4882 aa4.61□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1fB9EJP6 147 aa4.6□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1cQ9D1C5 147 aa4.6□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1lQ9D1G7 135 aa4.6□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1dQ9D731 133 aa4.6□□□□□ -1.67
Col18a1-201ENSMUST00000072755 Lce1bQ9D149 137 aa4.57□□□□□ -1.68
Col18a1-201ENSMUST00000072755 Sprr2fO70557 76 aa4.57□□□□□ -1.68
Col18a1-201ENSMUST00000072755 Kmt2cQ8BRH4 4903 aa4.56□□□□□ -1.68
Col18a1-201ENSMUST00000072755 Pkhd1E9PZ36 4059 aa4.55□□□□□ -1.68
Col18a1-201ENSMUST00000072755 Krtap9-3Q3V2C1 136 aa4.54□□□□□ -1.68
Col18a1-201ENSMUST00000072755 Mdn1A2ANY6 5589 aaKnown RBP4.51□□□□□ -1.69
Col18a1-201ENSMUST00000072755 Lce1eQ9D139 143 aa4.5□□□□□ -1.69
Col18a1-201ENSMUST00000072755 Krtap19-4Q925H7 84 aa4.5□□□□□ -1.69
Col18a1-201ENSMUST00000072755 Gm10024A0A0A0MQA4 119 aa4.48□□□□□ -1.69
Col18a1-201ENSMUST00000072755 Sprr2eO70556 76 aa4.48□□□□□ -1.69
Col18a1-201ENSMUST00000072755 Mt4P47945 62 aa4.41□□□□□ -1.7
Col18a1-201ENSMUST00000072755 Krtap31-2Q8CAY5 177 aa4.4□□□□□ -1.71
Col18a1-201ENSMUST00000072755 Krtap17-1A2A5X6 109 aa4.38□□□□□ -1.71
Col18a1-201ENSMUST00000072755 Lce1a2Q9D1K4 149 aa4.38□□□□□ -1.71
Col18a1-201ENSMUST00000072755 Abca13Q5SSE9 5034 aa4.37□□□□□ -1.71
Col18a1-201ENSMUST00000072755 Krtap4-6Q3V4B7 195 aa4.36□□□□□ -1.71
Col18a1-201ENSMUST00000072755 Gm11596B1AQB0 205 aa4.26□□□□□ -1.73
Col18a1-201ENSMUST00000072755 Syne1Q6ZWR6 8799 aa4.25□□□□□ -1.73
Col18a1-201ENSMUST00000072755 Rnf213E9Q555 5152 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms