RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Ryr1E9PZQ0 5035 aa7.55□□□□□ -1.2
Sdc3-201ENSMUST00000070478 Gm6358A0A087WPH4 74 aa7.54□□□□□ -1.2
Sdc3-201ENSMUST00000070478 Dync2h1Q45VK7 4306 aa7.51□□□□□ -1.21
Sdc3-201ENSMUST00000070478 Krtap8-1O08633 61 aa7.49□□□□□ -1.21
Sdc3-201ENSMUST00000070478 TnxbO35452 4006 aa7.48□□□□□ -1.21
Sdc3-201ENSMUST00000070478 Dync1h1Q9JHU4 4644 aaKnown RBP7.44□□□□□ -1.22
Sdc3-201ENSMUST00000070478 ApobE9Q414 4505 aa7.43□□□□□ -1.22
Sdc3-201ENSMUST00000070478 Gm19402J3QJV4 266 aa7.41□□□□□ -1.22
Sdc3-201ENSMUST00000070478 Krtap12-1Q9Z287 130 aa7.4□□□□□ -1.22
Sdc3-201ENSMUST00000070478 PrkdcP97313 4128 aa7.39□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Lrp1bQ9JI18 4599 aa7.39□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Krtap7-1Q9D3I6 87 aa7.39□□□□□ -1.23
Sdc3-201ENSMUST00000070478 SacsQ9JLC8 4582 aa7.37□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Dnah2P0C6F1 4456 aa7.37□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Mycbp2Q7TPH6 4711 aa7.36□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Krtap19-9bQ99NG9 58 aa7.34□□□□□ -1.23
Sdc3-201ENSMUST00000070478 Lce1mQ9CR91 182 aa7.26□□□□□ -1.25
Sdc3-201ENSMUST00000070478 Sprr2kO70562 68 aa7.25□□□□□ -1.25
Sdc3-201ENSMUST00000070478 Kmt2aP55200 3966 aa7.23□□□□□ -1.25
Sdc3-201ENSMUST00000070478 Dnah3Q8BW94 4083 aa7.18□□□□□ -1.26
Sdc3-201ENSMUST00000070478 Ryr3A2AGL3 4863 aa7.15□□□□□ -1.27
Sdc3-201ENSMUST00000070478 Fat1A0A1L1SQU7 4645 aa7.13□□□□□ -1.27
Sdc3-201ENSMUST00000070478 Dnah6E9Q0B6 4144 aa7.12□□□□□ -1.27
Sdc3-201ENSMUST00000070478 Dnah1E9Q8T7 4250 aa7.11□□□□□ -1.27
Sdc3-201ENSMUST00000070478 Krtap16-3Q8C1I6 86 aa7.05□□□□□ -1.28
Sdc3-201ENSMUST00000070478 Hectd4E9Q2E4 4418 aa7.04□□□□□ -1.28
Sdc3-201ENSMUST00000070478 Krtap19-3Q925H6 87 aa7.04□□□□□ -1.28
Sdc3-201ENSMUST00000070478 Pkd1O08852 4293 aa7.04□□□□□ -1.28
Sdc3-201ENSMUST00000070478 Dnah8Q91XQ0 4731 aa7.01□□□□□ -1.29
Sdc3-201ENSMUST00000070478 Lrp1Q91ZX7 4545 aaKnown RBP7.01□□□□□ -1.29
Sdc3-201ENSMUST00000070478 HydinQ80W93 5154 aa6.98□□□□□ -1.29
Sdc3-201ENSMUST00000070478 Kiaa1109A2AAE1 5005 aa6.98□□□□□ -1.29
Sdc3-201ENSMUST00000070478 Fat3Q8BNA6 4555 aa6.98□□□□□ -1.29
Sdc3-201ENSMUST00000070478 Krtap9-5A2A5X3 358 aa6.94□□□□□ -1.3
Sdc3-201ENSMUST00000070478 Herc2Q4U2R1 4836 aa6.93□□□□□ -1.3
Sdc3-201ENSMUST00000070478 Prm1P02319 51 aa6.92□□□□□ -1.3
Sdc3-201ENSMUST00000070478 Krtap19-1Q925H2 87 aa6.9□□□□□ -1.3
Sdc3-201ENSMUST00000070478 Lrp2A2ARV4 4660 aa6.86□□□□□ -1.31
Sdc3-201ENSMUST00000070478 Sprr2gO70558 76 aa6.83□□□□□ -1.32
Sdc3-201ENSMUST00000070478 Ryr2E9Q401 4966 aaKnown RBP6.82□□□□□ -1.32
Sdc3-201ENSMUST00000070478 Dnhd1D3Z2X2 4750 aa6.75□□□□□ -1.33
Sdc3-201ENSMUST00000070478 Fras1Q80T14 4010 aa6.75□□□□□ -1.33
Sdc3-201ENSMUST00000070478 Dnah7cA0A087WR13 4024 aa6.73□□□□□ -1.33
Sdc3-201ENSMUST00000070478 Vps13bQ80TY5 3993 aa6.7□□□□□ -1.34
Sdc3-201ENSMUST00000070478 Gm7735D3YX18 52 aa6.68□□□□□ -1.34
Sdc3-201ENSMUST00000070478 Dnah7aE9Q0T8 4024 aa6.65□□□□□ -1.34
Sdc3-201ENSMUST00000070478 Fat2Q5F226 4351 aa6.64□□□□□ -1.35
Sdc3-201ENSMUST00000070478 Lce3bQ9CQM7 98 aa6.63□□□□□ -1.35
Sdc3-201ENSMUST00000070478 Mt2P02798 61 aa6.58□□□□□ -1.36
Sdc3-201ENSMUST00000070478 Krtap1-3A2A588 173 aa6.57□□□□□ -1.36
Sdc3-201ENSMUST00000070478 Krtap22-2J3QNX6 67 aa6.55□□□□□ -1.36
Sdc3-201ENSMUST00000070478 PcloQ9QYX7 5068 aa6.54□□□□□ -1.36
Sdc3-201ENSMUST00000070478 Gm10272F7CZ33 110 aa6.53□□□□□ -1.36
Sdc3-201ENSMUST00000070478 Krtap19-2Q925I0 141 aa6.53□□□□□ -1.36
Sdc3-201ENSMUST00000070478 Gm9789Q8BIG3 52 aa6.5□□□□□ -1.37
Sdc3-201ENSMUST00000070478 Lce3cQ91V05 98 aa6.5□□□□□ -1.37
Sdc3-201ENSMUST00000070478 Kmt2cQ8BRH4 4903 aa6.48□□□□□ -1.37
Sdc3-201ENSMUST00000070478 Gm10100J3QK64 120 aa6.41□□□□□ -1.38
Sdc3-201ENSMUST00000070478 Lce1jD3YUU5 139 aa6.4□□□□□ -1.38
Sdc3-201ENSMUST00000070478 2310046K23RikA0A0A6YVW6 87 aa6.36□□□□□ -1.39
Sdc3-201ENSMUST00000070478 Gm38119A0A0A6YX29 146 aa6.35□□□□□ -1.39
Sdc3-201ENSMUST00000070478 Birc6O88738 4882 aa6.3□□□□□ -1.4
Sdc3-201ENSMUST00000070478 Gm10061D3Z714 54 aa6.3□□□□□ -1.4
Sdc3-201ENSMUST00000070478 Lce3eF8VQJ0 98 aa6.29□□□□□ -1.4
Sdc3-201ENSMUST00000070478 Lce3fQ6PAI4 98 aa6.29□□□□□ -1.4
Sdc3-201ENSMUST00000070478 Herc1E9PZP8 4859 aa6.28□□□□□ -1.4
Sdc3-201ENSMUST00000070478 Abca13Q5SSE9 5034 aa6.24□□□□□ -1.41
Sdc3-201ENSMUST00000070478 Mdn1A2ANY6 5589 aaKnown RBP6.24□□□□□ -1.41
Sdc3-201ENSMUST00000070478 Pkhd1E9PZ36 4059 aa6.24□□□□□ -1.41
Sdc3-201ENSMUST00000070478 Lce3dE9Q8V1 98 aa6.22□□□□□ -1.41
Sdc3-201ENSMUST00000070478 Gm10142J3KMP7 120 aa6.21□□□□□ -1.42
Sdc3-201ENSMUST00000070478 Sprr2iO70560 76 aa6.18□□□□□ -1.42
Sdc3-201ENSMUST00000070478 Gm11569B1AQB1 180 aa6.16□□□□□ -1.42
Sdc3-201ENSMUST00000070478 Lce3aQ497I5 98 aa6.1□□□□□ -1.43
Sdc3-201ENSMUST00000070478 Pkhd1l1Q80ZA4 4249 aa6.01□□□□□ -1.45
Sdc3-201ENSMUST00000070478 4932415D10RikA0A1W2P6U8 4986 aa6.01□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1fB9EJP6 147 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1gQ9D195 139 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1cQ9D1C5 147 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1lQ9D1G7 135 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1iQ9D6P5 149 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1hQ9D6R3 140 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1dQ9D731 133 aa6□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Lce1bQ9D149 137 aa5.98□□□□□ -1.45
Sdc3-201ENSMUST00000070478 Ubr4A2AN08 5180 aa5.93□□□□□ -1.46
Sdc3-201ENSMUST00000070478 Krtap4-2B1AQ85 167 aa5.86□□□□□ -1.47
Sdc3-201ENSMUST00000070478 Lce1eQ9D139 143 aa5.84□□□□□ -1.47
Sdc3-201ENSMUST00000070478 Mt4P47945 62 aa5.84□□□□□ -1.47
Sdc3-201ENSMUST00000070478 Fat4Q2PZL6 4981 aa5.84□□□□□ -1.48
Sdc3-201ENSMUST00000070478 Krtap9-3Q3V2C1 136 aa5.82□□□□□ -1.48
Sdc3-201ENSMUST00000070478 Krtap4-6Q3V4B7 195 aa5.81□□□□□ -1.48
Sdc3-201ENSMUST00000070478 Lce1a2Q9D1K4 149 aa5.78□□□□□ -1.48
Sdc3-201ENSMUST00000070478 Syne1Q6ZWR6 8799 aa5.77□□□□□ -1.49
Sdc3-201ENSMUST00000070478 ZanO88799 5376 aa5.75□□□□□ -1.49
Sdc3-201ENSMUST00000070478 Sprr2eO70556 76 aa5.75□□□□□ -1.49
Sdc3-201ENSMUST00000070478 Krtap19-4Q925H7 84 aa5.74□□□□□ -1.49
Sdc3-201ENSMUST00000070478 Rnf213E9Q555 5152 aaKnown RBP5.72□□□□□ -1.49
Sdc3-201ENSMUST00000070478 Gm10024A0A0A0MQA4 119 aa5.72□□□□□ -1.49
Sdc3-201ENSMUST00000070478 Sprr2fO70557 76 aa5.67□□□□□ -1.5
Sdc3-201ENSMUST00000070478 Ush2AQ2QI47 5193 aa5.62□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 148.6 ms