RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Ryr1E9PZQ0 5035 aa7,55□□□□□ -1,2
Sdc3-201ENSMUST00000070478 Gm6358A0A087WPH4 74 aa7,54□□□□□ -1,2
Sdc3-201ENSMUST00000070478 Dync2h1Q45VK7 4306 aa7,51□□□□□ -1,21
Sdc3-201ENSMUST00000070478 Krtap8-1O08633 61 aa7,49□□□□□ -1,21
Sdc3-201ENSMUST00000070478 TnxbO35452 4006 aa7,48□□□□□ -1,21
Sdc3-201ENSMUST00000070478 Dync1h1Q9JHU4 4644 aaKnown RBP7,44□□□□□ -1,22
Sdc3-201ENSMUST00000070478 ApobE9Q414 4505 aa7,43□□□□□ -1,22
Sdc3-201ENSMUST00000070478 Gm19402J3QJV4 266 aa7,41□□□□□ -1,22
Sdc3-201ENSMUST00000070478 Krtap12-1Q9Z287 130 aa7,4□□□□□ -1,22
Sdc3-201ENSMUST00000070478 PrkdcP97313 4128 aa7,39□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Lrp1bQ9JI18 4599 aa7,39□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Krtap7-1Q9D3I6 87 aa7,39□□□□□ -1,23
Sdc3-201ENSMUST00000070478 SacsQ9JLC8 4582 aa7,37□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Dnah2P0C6F1 4456 aa7,37□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Mycbp2Q7TPH6 4711 aa7,36□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Krtap19-9bQ99NG9 58 aa7,34□□□□□ -1,23
Sdc3-201ENSMUST00000070478 Lce1mQ9CR91 182 aa7,26□□□□□ -1,25
Sdc3-201ENSMUST00000070478 Sprr2kO70562 68 aa7,25□□□□□ -1,25
Sdc3-201ENSMUST00000070478 Kmt2aP55200 3966 aa7,23□□□□□ -1,25
Sdc3-201ENSMUST00000070478 Dnah3Q8BW94 4083 aa7,18□□□□□ -1,26
Sdc3-201ENSMUST00000070478 Ryr3A2AGL3 4863 aa7,15□□□□□ -1,27
Sdc3-201ENSMUST00000070478 Fat1A0A1L1SQU7 4645 aa7,13□□□□□ -1,27
Sdc3-201ENSMUST00000070478 Dnah6E9Q0B6 4144 aa7,12□□□□□ -1,27
Sdc3-201ENSMUST00000070478 Dnah1E9Q8T7 4250 aa7,11□□□□□ -1,27
Sdc3-201ENSMUST00000070478 Krtap16-3Q8C1I6 86 aa7,05□□□□□ -1,28
Sdc3-201ENSMUST00000070478 Hectd4E9Q2E4 4418 aa7,04□□□□□ -1,28
Sdc3-201ENSMUST00000070478 Krtap19-3Q925H6 87 aa7,04□□□□□ -1,28
Sdc3-201ENSMUST00000070478 Pkd1O08852 4293 aa7,04□□□□□ -1,28
Sdc3-201ENSMUST00000070478 Dnah8Q91XQ0 4731 aa7,01□□□□□ -1,29
Sdc3-201ENSMUST00000070478 Lrp1Q91ZX7 4545 aaKnown RBP7,01□□□□□ -1,29
Sdc3-201ENSMUST00000070478 HydinQ80W93 5154 aa6,98□□□□□ -1,29
Sdc3-201ENSMUST00000070478 Kiaa1109A2AAE1 5005 aa6,98□□□□□ -1,29
Sdc3-201ENSMUST00000070478 Fat3Q8BNA6 4555 aa6,98□□□□□ -1,29
Sdc3-201ENSMUST00000070478 Krtap9-5A2A5X3 358 aa6,94□□□□□ -1,3
Sdc3-201ENSMUST00000070478 Herc2Q4U2R1 4836 aa6,93□□□□□ -1,3
Sdc3-201ENSMUST00000070478 Prm1P02319 51 aa6,92□□□□□ -1,3
Sdc3-201ENSMUST00000070478 Krtap19-1Q925H2 87 aa6,9□□□□□ -1,3
Sdc3-201ENSMUST00000070478 Lrp2A2ARV4 4660 aa6,86□□□□□ -1,31
Sdc3-201ENSMUST00000070478 Sprr2gO70558 76 aa6,83□□□□□ -1,32
Sdc3-201ENSMUST00000070478 Ryr2E9Q401 4966 aaKnown RBP6,82□□□□□ -1,32
Sdc3-201ENSMUST00000070478 Dnhd1D3Z2X2 4750 aa6,75□□□□□ -1,33
Sdc3-201ENSMUST00000070478 Fras1Q80T14 4010 aa6,75□□□□□ -1,33
Sdc3-201ENSMUST00000070478 Dnah7cA0A087WR13 4024 aa6,73□□□□□ -1,33
Sdc3-201ENSMUST00000070478 Vps13bQ80TY5 3993 aa6,7□□□□□ -1,34
Sdc3-201ENSMUST00000070478 Gm7735D3YX18 52 aa6,68□□□□□ -1,34
Sdc3-201ENSMUST00000070478 Dnah7aE9Q0T8 4024 aa6,65□□□□□ -1,34
Sdc3-201ENSMUST00000070478 Fat2Q5F226 4351 aa6,64□□□□□ -1,35
Sdc3-201ENSMUST00000070478 Lce3bQ9CQM7 98 aa6,63□□□□□ -1,35
Sdc3-201ENSMUST00000070478 Mt2P02798 61 aa6,58□□□□□ -1,36
Sdc3-201ENSMUST00000070478 Krtap1-3A2A588 173 aa6,57□□□□□ -1,36
Sdc3-201ENSMUST00000070478 Krtap22-2J3QNX6 67 aa6,55□□□□□ -1,36
Sdc3-201ENSMUST00000070478 PcloQ9QYX7 5068 aa6,54□□□□□ -1,36
Sdc3-201ENSMUST00000070478 Gm10272F7CZ33 110 aa6,53□□□□□ -1,36
Sdc3-201ENSMUST00000070478 Krtap19-2Q925I0 141 aa6,53□□□□□ -1,36
Sdc3-201ENSMUST00000070478 Gm9789Q8BIG3 52 aa6,5□□□□□ -1,37
Sdc3-201ENSMUST00000070478 Lce3cQ91V05 98 aa6,5□□□□□ -1,37
Sdc3-201ENSMUST00000070478 Kmt2cQ8BRH4 4903 aa6,48□□□□□ -1,37
Sdc3-201ENSMUST00000070478 Gm10100J3QK64 120 aa6,41□□□□□ -1,38
Sdc3-201ENSMUST00000070478 Lce1jD3YUU5 139 aa6,4□□□□□ -1,38
Sdc3-201ENSMUST00000070478 2310046K23RikA0A0A6YVW6 87 aa6,36□□□□□ -1,39
Sdc3-201ENSMUST00000070478 Gm38119A0A0A6YX29 146 aa6,35□□□□□ -1,39
Sdc3-201ENSMUST00000070478 Birc6O88738 4882 aa6,3□□□□□ -1,4
Sdc3-201ENSMUST00000070478 Gm10061D3Z714 54 aa6,3□□□□□ -1,4
Sdc3-201ENSMUST00000070478 Lce3eF8VQJ0 98 aa6,29□□□□□ -1,4
Sdc3-201ENSMUST00000070478 Lce3fQ6PAI4 98 aa6,29□□□□□ -1,4
Sdc3-201ENSMUST00000070478 Herc1E9PZP8 4859 aa6,28□□□□□ -1,4
Sdc3-201ENSMUST00000070478 Abca13Q5SSE9 5034 aa6,24□□□□□ -1,41
Sdc3-201ENSMUST00000070478 Mdn1A2ANY6 5589 aaKnown RBP6,24□□□□□ -1,41
Sdc3-201ENSMUST00000070478 Pkhd1E9PZ36 4059 aa6,24□□□□□ -1,41
Sdc3-201ENSMUST00000070478 Lce3dE9Q8V1 98 aa6,22□□□□□ -1,41
Sdc3-201ENSMUST00000070478 Gm10142J3KMP7 120 aa6,21□□□□□ -1,42
Sdc3-201ENSMUST00000070478 Sprr2iO70560 76 aa6,18□□□□□ -1,42
Sdc3-201ENSMUST00000070478 Gm11569B1AQB1 180 aa6,16□□□□□ -1,42
Sdc3-201ENSMUST00000070478 Lce3aQ497I5 98 aa6,1□□□□□ -1,43
Sdc3-201ENSMUST00000070478 Pkhd1l1Q80ZA4 4249 aa6,01□□□□□ -1,45
Sdc3-201ENSMUST00000070478 4932415D10RikA0A1W2P6U8 4986 aa6,01□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1fB9EJP6 147 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1gQ9D195 139 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1cQ9D1C5 147 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1lQ9D1G7 135 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1iQ9D6P5 149 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1hQ9D6R3 140 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1dQ9D731 133 aa6□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Lce1bQ9D149 137 aa5,98□□□□□ -1,45
Sdc3-201ENSMUST00000070478 Ubr4A2AN08 5180 aa5,93□□□□□ -1,46
Sdc3-201ENSMUST00000070478 Krtap4-2B1AQ85 167 aa5,86□□□□□ -1,47
Sdc3-201ENSMUST00000070478 Lce1eQ9D139 143 aa5,84□□□□□ -1,47
Sdc3-201ENSMUST00000070478 Mt4P47945 62 aa5,84□□□□□ -1,47
Sdc3-201ENSMUST00000070478 Fat4Q2PZL6 4981 aa5,84□□□□□ -1,48
Sdc3-201ENSMUST00000070478 Krtap9-3Q3V2C1 136 aa5,82□□□□□ -1,48
Sdc3-201ENSMUST00000070478 Krtap4-6Q3V4B7 195 aa5,81□□□□□ -1,48
Sdc3-201ENSMUST00000070478 Lce1a2Q9D1K4 149 aa5,78□□□□□ -1,48
Sdc3-201ENSMUST00000070478 Syne1Q6ZWR6 8799 aa5,77□□□□□ -1,49
Sdc3-201ENSMUST00000070478 ZanO88799 5376 aa5,75□□□□□ -1,49
Sdc3-201ENSMUST00000070478 Sprr2eO70556 76 aa5,75□□□□□ -1,49
Sdc3-201ENSMUST00000070478 Krtap19-4Q925H7 84 aa5,74□□□□□ -1,49
Sdc3-201ENSMUST00000070478 Rnf213E9Q555 5152 aaKnown RBP5,72□□□□□ -1,49
Sdc3-201ENSMUST00000070478 Gm10024A0A0A0MQA4 119 aa5,72□□□□□ -1,49
Sdc3-201ENSMUST00000070478 Sprr2fO70557 76 aa5,67□□□□□ -1,5
Sdc3-201ENSMUST00000070478 Ush2AQ2QI47 5193 aa5,62□□□□□ -1,51
Retrieved 100 of 22,080 RNA–protein pairs in 36,2 ms