RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 A030005K14RikA0A1Y7VNY1 122 aa3.7□□□□□ -1.82
Cpsf6-201ENSMUST00000069168 Fat1A0A1L1SQU7 4645 aa3.69□□□□□ -1.82
Cpsf6-201ENSMUST00000069168 Ndufaf8A2AMZ4 74 aa3.68□□□□□ -1.82
Cpsf6-201ENSMUST00000069168 Gm7544A0A1Y7VJ58 118 aa3.65□□□□□ -1.82
Cpsf6-201ENSMUST00000069168 Prm2P07978 107 aa3.65□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Kmt2cQ8BRH4 4903 aa3.64□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Dync1h1Q9JHU4 4644 aaKnown RBP3.63□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 A0A1Y7VJ07 166 aa3.63□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Ryr1E9PZQ0 5035 aa3.62□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Pkhd1l1Q80ZA4 4249 aa3.62□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Ryr2E9Q401 4966 aaKnown RBP3.62□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 A030005L19RikA0A1Y7VIU2 113 aa3.61□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Gm40193A0A1B0GT39 78 aa3.6□□□□□ -1.83
Cpsf6-201ENSMUST00000069168 Gm11939A2A592 99 aa3.58□□□□□ -1.84
Cpsf6-201ENSMUST00000069168 Lrp1Q91ZX7 4545 aaKnown RBP3.56□□□□□ -1.84
Cpsf6-201ENSMUST00000069168 Gm17416Q30KP4 66 aa3.55□□□□□ -1.84
Cpsf6-201ENSMUST00000069168 B930094E09RikQ8C4T2 136 aa3.51□□□□□ -1.85
Cpsf6-201ENSMUST00000069168 Tnp1P10856 55 aa3.51□□□□□ -1.85
Cpsf6-201ENSMUST00000069168 Gm5965D3Z724 196 aa3.49□□□□□ -1.85
Cpsf6-201ENSMUST00000069168 Gm17402F6Z0L5 76 aa3.48□□□□□ -1.85
Cpsf6-201ENSMUST00000069168 Gm9736A0A1W2P7N1 277 aa3.47□□□□□ -1.85
Cpsf6-201ENSMUST00000069168 2210017I01RikA0A0A6YVV1 95 aa3.46□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Abca13Q5SSE9 5034 aa3.45□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Krtap19-5O08632 62 aa3.45□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Mycbp2Q7TPH6 4711 aa3.45□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Fat3Q8BNA6 4555 aa3.44□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 2310057N15RikQ9D6T8 200 aa3.42□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Dnah8Q91XQ0 4731 aa3.42□□□□□ -1.86
Cpsf6-201ENSMUST00000069168 Gm18596A0A1W2P860 280 aa3.39□□□□□ -1.87
Cpsf6-201ENSMUST00000069168 Lce1mQ9CR91 182 aa3.39□□□□□ -1.87
Cpsf6-201ENSMUST00000069168 Birc6O88738 4882 aa3.39□□□□□ -1.87
Cpsf6-201ENSMUST00000069168 Krtap3-1A2A591 98 aa3.36□□□□□ -1.87
Cpsf6-201ENSMUST00000069168 4933428G20RikQ9D3X4 101 aa3.35□□□□□ -1.87
Cpsf6-201ENSMUST00000069168 PcloQ9QYX7 5068 aa3.34□□□□□ -1.88
Cpsf6-201ENSMUST00000069168 Herc2Q4U2R1 4836 aa3.33□□□□□ -1.88
Cpsf6-201ENSMUST00000069168 A030014E15RikA0A1Y7VJV2 120 aa3.28□□□□□ -1.88
Cpsf6-201ENSMUST00000069168 HydinQ80W93 5154 aa3.27□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Kiaa1109A2AAE1 5005 aa3.25□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Lrp2A2ARV4 4660 aa3.25□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Dnhd1D3Z2X2 4750 aa3.25□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Krtap13-1Q8K198 168 aa3.24□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Herc1E9PZP8 4859 aa3.22□□□□□ -1.89
Cpsf6-201ENSMUST00000069168 Gm10318A0A1W2P728 225 aa3.17□□□□□ -1.9
Cpsf6-201ENSMUST00000069168 Crct1Q6PAI5 102 aa3.17□□□□□ -1.9
Cpsf6-201ENSMUST00000069168 Gm19668J3QMD1 248 aa3.15□□□□□ -1.9
Cpsf6-201ENSMUST00000069168 Krtap7-1Q9D3I6 87 aa3.14□□□□□ -1.91
Cpsf6-201ENSMUST00000069168 Krtap1-5A2A590 122 aa3.14□□□□□ -1.91
Cpsf6-201ENSMUST00000069168 Sprr2a3Q4KL71 83 aa3.12□□□□□ -1.91
Cpsf6-201ENSMUST00000069168 Sprr2a1Q9CQK8 83 aa3.12□□□□□ -1.91
Cpsf6-201ENSMUST00000069168 Gm9789Q8BIG3 52 aa3.06□□□□□ -1.92
Cpsf6-201ENSMUST00000069168 Gm7735D3YX18 52 aa3.05□□□□□ -1.92
Cpsf6-201ENSMUST00000069168 Gm19402J3QJV4 266 aa3.04□□□□□ -1.92
Cpsf6-201ENSMUST00000069168 Krtap4-1Q3UUY3 169 aa3.04□□□□□ -1.92
Cpsf6-201ENSMUST00000069168 Sprr2kO70562 68 aa3.03□□□□□ -1.92
Cpsf6-201ENSMUST00000069168 Prm1P02319 51 aa3.02□□□□□ -1.93
Cpsf6-201ENSMUST00000069168 Ush2AQ2QI47 5193 aa3.02□□□□□ -1.93
Cpsf6-201ENSMUST00000069168 Krtap16-3Q8C1I6 86 aa3□□□□□ -1.93
Cpsf6-201ENSMUST00000069168 LorP18165 486 aa2.99□□□□□ -1.93
Cpsf6-201ENSMUST00000069168 Krtap1-3A2A588 173 aa2.99□□□□□ -1.93
Cpsf6-201ENSMUST00000069168 Krtap19-1Q925H2 87 aa2.96□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Ubr4A2AN08 5180 aa2.94□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Krtap1-4Q3V2D6 188 aa2.94□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 ZanO88799 5376 aa2.94□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Sprr2gO70558 76 aa2.94□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Krtap19-3Q925H6 87 aa2.92□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Hmcn2A2AJ76 5100 aa2.92□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 4932415D10RikA0A1W2P6U8 4986 aa2.91□□□□□ -1.94
Cpsf6-201ENSMUST00000069168 Krtap19-9aF8WH65 55 aa2.89□□□□□ -1.95
Cpsf6-201ENSMUST00000069168 Fat4Q2PZL6 4981 aa2.88□□□□□ -1.95
Cpsf6-201ENSMUST00000069168 Gm6358A0A087WPH4 74 aa2.84□□□□□ -1.95
Cpsf6-201ENSMUST00000069168 Gm11563B1AQ90 168 aa2.82□□□□□ -1.96
Cpsf6-201ENSMUST00000069168 Krtap4-7Q9D732 168 aa2.82□□□□□ -1.96
Cpsf6-201ENSMUST00000069168 Krtap19-9bQ99NG9 58 aa2.81□□□□□ -1.96
Cpsf6-201ENSMUST00000069168 Krtap12-1Q9Z287 130 aa2.79□□□□□ -1.96
Cpsf6-201ENSMUST00000069168 Lce1jD3YUU5 139 aa2.79□□□□□ -1.96
Cpsf6-201ENSMUST00000069168 Rnf213E9Q555 5152 aaKnown RBP2.77□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 Krtap17-1A2A5X6 109 aa2.75□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 Gm10061D3Z714 54 aa2.75□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 Gm11569B1AQB1 180 aa2.74□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 Krtap8-1O08633 61 aa2.73□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 2310046K23RikA0A0A6YVW6 87 aa2.72□□□□□ -1.97
Cpsf6-201ENSMUST00000069168 Krtap4-2B1AQ85 167 aa2.67□□□□□ -1.98
Cpsf6-201ENSMUST00000069168 A0A286YCP9 139 aa2.66□□□□□ -1.98
Cpsf6-201ENSMUST00000069168 SspoQ8CG65 4998 aa2.64□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Sprr2fO70557 76 aa2.63□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Krtap9-5A2A5X3 358 aa2.63□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Lce1iQ9D6P5 149 aa2.62□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Krtap31-2Q8CAY5 177 aa2.6□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Lce1a2Q9D1K4 149 aa2.6□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Lce1gQ9D195 139 aa2.6□□□□□ -1.99
Cpsf6-201ENSMUST00000069168 Krtap9-3Q3V2C1 136 aa2.57□□□□□ -2
Cpsf6-201ENSMUST00000069168 Gm11555B1AQ89 175 aa2.57□□□□□ -2
Cpsf6-201ENSMUST00000069168 Krtap4-6Q3V4B7 195 aa2.56□□□□□ -2
Cpsf6-201ENSMUST00000069168 Krtap19-2Q925I0 141 aa2.55□□□□□ -2
Cpsf6-201ENSMUST00000069168 Gm11596B1AQB0 205 aa2.53□□□□□ -2
Cpsf6-201ENSMUST00000069168 Lce1hQ9D6R3 140 aa2.53□□□□□ -2
Cpsf6-201ENSMUST00000069168 Gm11562A0PK51 136 aa2.48□□□□□ -2.01
Cpsf6-201ENSMUST00000069168 Syne2Q6ZWQ0 6874 aaKnown RBP2.48□□□□□ -2.01
Cpsf6-201ENSMUST00000069168 Muc5bE9Q5I3 4800 aa2.44□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Gm11564A2A4L9 201 aa2.42□□□□□ -2.02
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms