RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fat3Q8BNA6 4555 aa4.88□□□□□ -1.63
Pcdh1-201ENSMUST00000057185 Fat2Q5F226 4351 aa4.88□□□□□ -1.63
Pcdh1-201ENSMUST00000057185 Pkhd1E9PZ36 4059 aa4.82□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Sec61bQ9CQS8 96 aaKnown RBP4.81□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Mycbp2Q7TPH6 4711 aa4.81□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Gm17416Q30KP4 66 aa4.8□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Gm10318A0A1W2P728 225 aa4.8□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 HydinQ80W93 5154 aa4.79□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 B930094E09RikQ8C4T2 136 aa4.79□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Gm18596A0A1W2P860 280 aa4.78□□□□□ -1.64
Pcdh1-201ENSMUST00000057185 Krtap3-1A2A591 98 aa4.78□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Fam229aB2KGE5 128 aa4.77□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Abca13Q5SSE9 5034 aa4.77□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 2210017I01RikA0A0A6YVV1 95 aa4.77□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Ndufaf8A2AMZ4 74 aa4.77□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Pkhd1l1Q80ZA4 4249 aa4.76□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 PcloQ9QYX7 5068 aa4.75□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Dnah8Q91XQ0 4731 aa4.75□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Lce1mQ9CR91 182 aa4.74□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Lrp2A2ARV4 4660 aa4.73□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Camk2n1Q6QWF9 78 aa4.72□□□□□ -1.65
Pcdh1-201ENSMUST00000057185 Kmt2cQ8BRH4 4903 aa4.71□□□□□ -1.66
Pcdh1-201ENSMUST00000057185 Krtap13-1Q8K198 168 aa4.69□□□□□ -1.66
Pcdh1-201ENSMUST00000057185 Birc6O88738 4882 aa4.69□□□□□ -1.66
Pcdh1-201ENSMUST00000057185 Crct1Q6PAI5 102 aa4.69□□□□□ -1.66
Pcdh1-201ENSMUST00000057185 Dnhd1D3Z2X2 4750 aa4.67□□□□□ -1.66
Pcdh1-201ENSMUST00000057185 Herc1E9PZP8 4859 aa4.64□□□□□ -1.67
Pcdh1-201ENSMUST00000057185 Gm19402J3QJV4 266 aa4.5□□□□□ -1.69
Pcdh1-201ENSMUST00000057185 Prm2P07978 107 aa4.49□□□□□ -1.69
Pcdh1-201ENSMUST00000057185 Gm17402F6Z0L5 76 aa4.46□□□□□ -1.7
Pcdh1-201ENSMUST00000057185 Gm40193A0A1B0GT39 78 aa4.45□□□□□ -1.7
Pcdh1-201ENSMUST00000057185 Krtap7-1Q9D3I6 87 aa4.43□□□□□ -1.7
Pcdh1-201ENSMUST00000057185 Ubr4A2AN08 5180 aa4.4□□□□□ -1.7
Pcdh1-201ENSMUST00000057185 Gm19668J3QMD1 248 aa4.4□□□□□ -1.7
Pcdh1-201ENSMUST00000057185 Krtap1-5A2A590 122 aa4.39□□□□□ -1.71
Pcdh1-201ENSMUST00000057185 Gm9112A2AI92 75 aa4.39□□□□□ -1.71
Pcdh1-201ENSMUST00000057185 Ush2AQ2QI47 5193 aa4.36□□□□□ -1.71
Pcdh1-201ENSMUST00000057185 Prm1P02319 51 aa4.35□□□□□ -1.71
Pcdh1-201ENSMUST00000057185 Gm7735D3YX18 52 aa4.35□□□□□ -1.71
Pcdh1-201ENSMUST00000057185 Sprr2a3Q4KL71 83 aa4.33□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 Sprr2a1Q9CQK8 83 aa4.33□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 4932415D10RikA0A1W2P6U8 4986 aa4.32□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 Krtap16-3Q8C1I6 86 aa4.32□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 Tnp1P10856 55 aa4.31□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 LorP18165 486 aa4.31□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 Gm9789Q8BIG3 52 aa4.28□□□□□ -1.72
Pcdh1-201ENSMUST00000057185 Krtap19-3Q925H6 87 aa4.25□□□□□ -1.73
Pcdh1-201ENSMUST00000057185 Krtap19-1Q925H2 87 aa4.23□□□□□ -1.73
Pcdh1-201ENSMUST00000057185 Krtap1-4Q3V2D6 188 aa4.21□□□□□ -1.74
Pcdh1-201ENSMUST00000057185 Hmcn2A2AJ76 5100 aa4.2□□□□□ -1.74
Pcdh1-201ENSMUST00000057185 Krtap1-3A2A588 173 aa4.15□□□□□ -1.74
Pcdh1-201ENSMUST00000057185 ZanO88799 5376 aa4.1□□□□□ -1.75
Pcdh1-201ENSMUST00000057185 Fat4Q2PZL6 4981 aa4.1□□□□□ -1.75
Pcdh1-201ENSMUST00000057185 Krtap12-1Q9Z287 130 aa4.05□□□□□ -1.76
Pcdh1-201ENSMUST00000057185 Krtap19-9aF8WH65 55 aa4.04□□□□□ -1.76
Pcdh1-201ENSMUST00000057185 Lce1jD3YUU5 139 aa4.03□□□□□ -1.76
Pcdh1-201ENSMUST00000057185 Rnf213E9Q555 5152 aaKnown RBP4.01□□□□□ -1.77
Pcdh1-201ENSMUST00000057185 Gm10061D3Z714 54 aa3.92□□□□□ -1.78
Pcdh1-201ENSMUST00000057185 Mdn1A2ANY6 5589 aaKnown RBP3.9□□□□□ -1.79
Pcdh1-201ENSMUST00000057185 Krtap17-1A2A5X6 109 aa3.87□□□□□ -1.79
Pcdh1-201ENSMUST00000057185 Krtap9-5A2A5X3 358 aa3.86□□□□□ -1.79
Pcdh1-201ENSMUST00000057185 Gm11569B1AQB1 180 aa3.86□□□□□ -1.79
Pcdh1-201ENSMUST00000057185 Krtap19-9bQ99NG9 58 aa3.85□□□□□ -1.79
Pcdh1-201ENSMUST00000057185 Krtap19-2Q925I0 141 aa3.8□□□□□ -1.8
Pcdh1-201ENSMUST00000057185 Krtap4-2B1AQ85 167 aa3.77□□□□□ -1.81
Pcdh1-201ENSMUST00000057185 Krtap8-1O08633 61 aa3.77□□□□□ -1.81
Pcdh1-201ENSMUST00000057185 Lce1iQ9D6P5 149 aa3.74□□□□□ -1.81
Pcdh1-201ENSMUST00000057185 Lce1a2Q9D1K4 149 aa3.71□□□□□ -1.82
Pcdh1-201ENSMUST00000057185 Lce1gQ9D195 139 aa3.68□□□□□ -1.82
Pcdh1-201ENSMUST00000057185 2310046K23RikA0A0A6YVW6 87 aa3.64□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Krtap9-3Q3V2C1 136 aa3.64□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Syne2Q6ZWQ0 6874 aaKnown RBP3.63□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Gm6358A0A087WPH4 74 aa3.63□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Mt2P02798 61 aa3.63□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Krtap4-6Q3V4B7 195 aa3.62□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 4933428G20RikQ9D3X4 101 aa3.61□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 SspoQ8CG65 4998 aa3.6□□□□□ -1.83
Pcdh1-201ENSMUST00000057185 Lce1hQ9D6R3 140 aa3.57□□□□□ -1.84
Pcdh1-201ENSMUST00000057185 Fsip2A2ARZ3 6995 aa3.56□□□□□ -1.84
Pcdh1-201ENSMUST00000057185 Gm11596B1AQB0 205 aa3.55□□□□□ -1.84
Pcdh1-201ENSMUST00000057185 Muc5bE9Q5I3 4800 aa3.53□□□□□ -1.84
Pcdh1-201ENSMUST00000057185 Gm11562A0PK51 136 aa3.51□□□□□ -1.85
Pcdh1-201ENSMUST00000057185 Krtap4-1Q3UUY3 169 aa3.51□□□□□ -1.85
Pcdh1-201ENSMUST00000057185 Gm10272F7CZ33 110 aa3.5□□□□□ -1.85
Pcdh1-201ENSMUST00000057185 Sprr2kO70562 68 aa3.49□□□□□ -1.85
Pcdh1-201ENSMUST00000057185 Krtap22-2J3QNX6 67 aa3.43□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Gm11564A2A4L9 201 aa3.42□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Gm11563B1AQ90 168 aa3.42□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Gm11595B1AQA7 289 aa3.42□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Krtap4-8B1AQA8 209 aa3.42□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Mt4P47945 62 aa3.4□□□□□ -1.86
Pcdh1-201ENSMUST00000057185 Krtap4-9B1AQA9 244 aa3.37□□□□□ -1.87
Pcdh1-201ENSMUST00000057185 Lce1dQ9D731 133 aa3.37□□□□□ -1.87
Pcdh1-201ENSMUST00000057185 Gm38119A0A0A6YX29 146 aa3.36□□□□□ -1.87
Pcdh1-201ENSMUST00000057185 Gm11555B1AQ89 175 aa3.36□□□□□ -1.87
Pcdh1-201ENSMUST00000057185 Syne1Q6ZWR6 8799 aa3.33□□□□□ -1.88
Pcdh1-201ENSMUST00000057185 Gm10100J3QK64 120 aa3.33□□□□□ -1.88
Pcdh1-201ENSMUST00000057185 Sprr2gO70558 76 aa3.29□□□□□ -1.88
Pcdh1-201ENSMUST00000057185 Lce3bQ9CQM7 98 aa3.28□□□□□ -1.88
Pcdh1-201ENSMUST00000057185 Krtap4-13Q9D7P3 165 aa3.27□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 98.7 ms