RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Gm18596A0A1W2P860 280 aa3.04□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Dync2h1Q45VK7 4306 aa3.03□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Dnah7bL7N1Y0 4068 aa3.02□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Krtap17-1A2A5X6 109 aa3.02□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Krtap1-5A2A590 122 aa3.01□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Lce1mQ9CR91 182 aa3□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Ryr1E9PZQ0 5035 aa2.99□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Dnah9B1AR51 4484 aa2.99□□□□□ -1.93
Smc1a-201ENSMUST00000045312 PrkdcP97313 4128 aa2.98□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Dync1h1Q9JHU4 4644 aaKnown RBP2.97□□□□□ -1.93
Smc1a-201ENSMUST00000045312 Dnah11E9Q7N9 4488 aa2.96□□□□□ -1.94
Smc1a-201ENSMUST00000045312 Dnah2P0C6F1 4456 aa2.94□□□□□ -1.94
Smc1a-201ENSMUST00000045312 Fras1Q80T14 4010 aa2.94□□□□□ -1.94
Smc1a-201ENSMUST00000045312 ApobE9Q414 4505 aa2.92□□□□□ -1.94
Smc1a-201ENSMUST00000045312 Gm11563B1AQ90 168 aa2.91□□□□□ -1.94
Smc1a-201ENSMUST00000045312 Krtap4-7Q9D732 168 aa2.91□□□□□ -1.94
Smc1a-201ENSMUST00000045312 Pkd1O08852 4293 aa2.89□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Krtap1-4Q3V2D6 188 aa2.89□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Krtap19-9aF8WH65 55 aa2.88□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Gm6358A0A087WPH4 74 aa2.87□□□□□ -1.95
Smc1a-201ENSMUST00000045312 SacsQ9JLC8 4582 aa2.87□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Lrp1bQ9JI18 4599 aa2.86□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Mycbp2Q7TPH6 4711 aa2.85□□□□□ -1.95
Smc1a-201ENSMUST00000045312 LorP18165 486 aa2.84□□□□□ -1.95
Smc1a-201ENSMUST00000045312 Krtap12-1Q9Z287 130 aa2.83□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Dnah7aE9Q0T8 4024 aa2.83□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Krtap19-9bQ99NG9 58 aa2.83□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Dnah7cA0A087WR13 4024 aa2.83□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Prm1P02319 51 aa2.81□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Ryr3A2AGL3 4863 aa2.81□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Hectd4E9Q2E4 4418 aa2.81□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Ryr2E9Q401 4966 aaKnown RBP2.79□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Krtap4-2B1AQ85 167 aa2.79□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Krtap31-2Q8CAY5 177 aa2.78□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Dnah8Q91XQ0 4731 aa2.78□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Fat1A0A1L1SQU7 4645 aa2.78□□□□□ -1.96
Smc1a-201ENSMUST00000045312 Fat3Q8BNA6 4555 aa2.77□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Pkhd1E9PZ36 4059 aa2.77□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Kiaa1109A2AAE1 5005 aa2.76□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Gm11562A0PK51 136 aa2.76□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Herc2Q4U2R1 4836 aa2.75□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Gm7735D3YX18 52 aa2.74□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Lce1jD3YUU5 139 aa2.74□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Krtap16-3Q8C1I6 86 aa2.74□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Krtap8-1O08633 61 aa2.73□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Krtap19-3Q925H6 87 aa2.73□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Gm11555B1AQ89 175 aa2.72□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Krtap31-1Q9D644 177 aa2.72□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Syne1Q6ZWR6 8799 aa2.72□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Lrp1Q91ZX7 4545 aaKnown RBP2.72□□□□□ -1.97
Smc1a-201ENSMUST00000045312 Krtap19-1Q925H2 87 aa2.7□□□□□ -1.98
Smc1a-201ENSMUST00000045312 Vps13bQ80TY5 3993 aa2.69□□□□□ -1.98
Smc1a-201ENSMUST00000045312 HydinQ80W93 5154 aa2.69□□□□□ -1.98
Smc1a-201ENSMUST00000045312 2310046K23RikA0A0A6YVW6 87 aa2.68□□□□□ -1.98
Smc1a-201ENSMUST00000045312 Lrp2A2ARV4 4660 aa2.66□□□□□ -1.98
Smc1a-201ENSMUST00000045312 Gm10100J3QK64 120 aa2.64□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Fat2Q5F226 4351 aa2.63□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Birc6O88738 4882 aa2.63□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Gm9789Q8BIG3 52 aa2.63□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Dnhd1D3Z2X2 4750 aa2.61□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Krtap9-5A2A5X3 358 aa2.61□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Pkhd1l1Q80ZA4 4249 aa2.61□□□□□ -1.99
Smc1a-201ENSMUST00000045312 Lce1bQ9D149 137 aa2.6□□□□□ -1.99
Smc1a-201ENSMUST00000045312 4932415D10RikA0A1W2P6U8 4986 aa2.59□□□□□ -2
Smc1a-201ENSMUST00000045312 Lce1hQ9D6R3 140 aa2.57□□□□□ -2
Smc1a-201ENSMUST00000045312 Gm10142J3KMP7 120 aa2.56□□□□□ -2
Smc1a-201ENSMUST00000045312 Krtap1-3A2A588 173 aa2.56□□□□□ -2
Smc1a-201ENSMUST00000045312 Sprr2kO70562 68 aa2.56□□□□□ -2
Smc1a-201ENSMUST00000045312 Abca13Q5SSE9 5034 aa2.54□□□□□ -2
Smc1a-201ENSMUST00000045312 Lce3bQ9CQM7 98 aa2.54□□□□□ -2
Smc1a-201ENSMUST00000045312 Gm10272F7CZ33 110 aa2.53□□□□□ -2
Smc1a-201ENSMUST00000045312 PcloQ9QYX7 5068 aa2.52□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Herc1E9PZP8 4859 aa2.51□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Krtap19-2Q925I0 141 aa2.51□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Kmt2cQ8BRH4 4903 aa2.51□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Lce3cQ91V05 98 aa2.49□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Mt2P02798 61 aa2.48□□□□□ -2.01
Smc1a-201ENSMUST00000045312 Lce1gQ9D195 139 aa2.46□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Krtap22-2J3QNX6 67 aa2.46□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Lce3dE9Q8V1 98 aa2.44□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Gm10061D3Z714 54 aa2.44□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Sprr2gO70558 76 aa2.43□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Lce3eF8VQJ0 98 aa2.42□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Lce3fQ6PAI4 98 aa2.42□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Muc16A0A140LJ72 8478 aa2.41□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Krtap9-3Q3V2C1 136 aa2.41□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Lce1eQ9D139 143 aa2.41□□□□□ -2.02
Smc1a-201ENSMUST00000045312 Gm11569B1AQB1 180 aa2.38□□□□□ -2.03
Smc1a-201ENSMUST00000045312 Lce3aQ497I5 98 aa2.38□□□□□ -2.03
Smc1a-201ENSMUST00000045312 Ubr4A2AN08 5180 aa2.36□□□□□ -2.03
Smc1a-201ENSMUST00000045312 Mdn1A2ANY6 5589 aaKnown RBP2.34□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Ush2AQ2QI47 5193 aa2.33□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Gm11596B1AQB0 205 aa2.32□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Fat4Q2PZL6 4981 aa2.31□□□□□ -2.04
Smc1a-201ENSMUST00000045312 ZanO88799 5376 aa2.31□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Syne2Q6ZWQ0 6874 aaKnown RBP2.29□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Gm38119A0A0A6YX29 146 aa2.28□□□□□ -2.04
Smc1a-201ENSMUST00000045312 Gm11559Q9D3H7 191 aa2.27□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Lce1iQ9D6P5 149 aa2.27□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Krtap19-4Q925H7 84 aa2.26□□□□□ -2.05
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms