RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Krtap8-1O08633 61 aa6.91□□□□□ -1.3
Ubfd1-201ENSMUST00000033158 Dnah17Q69Z23 4481 aa6.88□□□□□ -1.31
Ubfd1-201ENSMUST00000033158 Krtap19-9bQ99NG9 58 aa6.87□□□□□ -1.31
Ubfd1-201ENSMUST00000033158 Krtap12-1Q9Z287 130 aa6.83□□□□□ -1.32
Ubfd1-201ENSMUST00000033158 Gm19402J3QJV4 266 aa6.82□□□□□ -1.32
Ubfd1-201ENSMUST00000033158 SacsQ9JLC8 4582 aa6.71□□□□□ -1.33
Ubfd1-201ENSMUST00000033158 Mycbp2Q7TPH6 4711 aa6.67□□□□□ -1.34
Ubfd1-201ENSMUST00000033158 Dnah11E9Q7N9 4488 aa6.66□□□□□ -1.34
Ubfd1-201ENSMUST00000033158 Dync1h1Q9JHU4 4644 aaKnown RBP6.66□□□□□ -1.34
Ubfd1-201ENSMUST00000033158 PrkdcP97313 4128 aa6.63□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 Dnah9B1AR51 4484 aa6.63□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 Dync2h1Q45VK7 4306 aa6.62□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 Sprr2kO70562 68 aa6.61□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 Ryr3A2AGL3 4863 aa6.6□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 ApobE9Q414 4505 aa6.6□□□□□ -1.35
Ubfd1-201ENSMUST00000033158 Dnah7bL7N1Y0 4068 aa6.56□□□□□ -1.36
Ubfd1-201ENSMUST00000033158 Dnah2P0C6F1 4456 aa6.55□□□□□ -1.36
Ubfd1-201ENSMUST00000033158 Lrp1bQ9JI18 4599 aa6.51□□□□□ -1.37
Ubfd1-201ENSMUST00000033158 HydinQ80W93 5154 aa6.5□□□□□ -1.37
Ubfd1-201ENSMUST00000033158 Fat1A0A1L1SQU7 4645 aa6.47□□□□□ -1.37
Ubfd1-201ENSMUST00000033158 Lce1mQ9CR91 182 aa6.46□□□□□ -1.37
Ubfd1-201ENSMUST00000033158 Kiaa1109A2AAE1 5005 aa6.45□□□□□ -1.38
Ubfd1-201ENSMUST00000033158 Krtap16-3Q8C1I6 86 aa6.43□□□□□ -1.38
Ubfd1-201ENSMUST00000033158 Kmt2aP55200 3966 aa6.43□□□□□ -1.38
Ubfd1-201ENSMUST00000033158 Herc2Q4U2R1 4836 aa6.43□□□□□ -1.38
Ubfd1-201ENSMUST00000033158 Krtap19-3Q925H6 87 aa6.42□□□□□ -1.38
Ubfd1-201ENSMUST00000033158 Krtap9-5A2A5X3 358 aa6.34□□□□□ -1.39
Ubfd1-201ENSMUST00000033158 Dnah8Q91XQ0 4731 aa6.34□□□□□ -1.4
Ubfd1-201ENSMUST00000033158 Lrp2A2ARV4 4660 aa6.3□□□□□ -1.4
Ubfd1-201ENSMUST00000033158 Krtap19-1Q925H2 87 aa6.29□□□□□ -1.4
Ubfd1-201ENSMUST00000033158 Dnah6E9Q0B6 4144 aa6.29□□□□□ -1.4
Ubfd1-201ENSMUST00000033158 Lrp1Q91ZX7 4545 aaKnown RBP6.28□□□□□ -1.4
Ubfd1-201ENSMUST00000033158 Sprr2gO70558 76 aa6.25□□□□□ -1.41
Ubfd1-201ENSMUST00000033158 Fat3Q8BNA6 4555 aa6.24□□□□□ -1.41
Ubfd1-201ENSMUST00000033158 Dnah1E9Q8T7 4250 aa6.24□□□□□ -1.41
Ubfd1-201ENSMUST00000033158 Pkd1O08852 4293 aa6.23□□□□□ -1.41
Ubfd1-201ENSMUST00000033158 Prm1P02319 51 aa6.18□□□□□ -1.42
Ubfd1-201ENSMUST00000033158 Hectd4E9Q2E4 4418 aa6.16□□□□□ -1.42
Ubfd1-201ENSMUST00000033158 Lce3bQ9CQM7 98 aa6.14□□□□□ -1.43
Ubfd1-201ENSMUST00000033158 Dnah3Q8BW94 4083 aa6.14□□□□□ -1.43
Ubfd1-201ENSMUST00000033158 Dnhd1D3Z2X2 4750 aa6.11□□□□□ -1.43
Ubfd1-201ENSMUST00000033158 Ryr2E9Q401 4966 aaKnown RBP6.1□□□□□ -1.43
Ubfd1-201ENSMUST00000033158 Gm10272F7CZ33 110 aa6.07□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 Gm10100J3QK64 120 aa6.07□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 Lce3cQ91V05 98 aa6.07□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 2310046K23RikA0A0A6YVW6 87 aa6.06□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 Mt2P02798 61 aa6.05□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 Krtap22-2J3QNX6 67 aa6.04□□□□□ -1.44
Ubfd1-201ENSMUST00000033158 Fras1Q80T14 4010 aa6.02□□□□□ -1.45
Ubfd1-201ENSMUST00000033158 PcloQ9QYX7 5068 aa5.96□□□□□ -1.45
Ubfd1-201ENSMUST00000033158 Krtap19-2Q925I0 141 aa5.96□□□□□ -1.46
Ubfd1-201ENSMUST00000033158 Gm7735D3YX18 52 aa5.94□□□□□ -1.46
Ubfd1-201ENSMUST00000033158 Krtap1-3A2A588 173 aa5.9□□□□□ -1.46
Ubfd1-201ENSMUST00000033158 Lce3eF8VQJ0 98 aa5.88□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Gm10142J3KMP7 120 aa5.88□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Lce3fQ6PAI4 98 aa5.88□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Dnah7cA0A087WR13 4024 aa5.87□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Lce1jD3YUU5 139 aa5.85□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Dnah7aE9Q0T8 4024 aa5.85□□□□□ -1.47
Ubfd1-201ENSMUST00000033158 Kmt2cQ8BRH4 4903 aa5.83□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Vps13bQ80TY5 3993 aa5.82□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Lce3dE9Q8V1 98 aa5.8□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Mdn1A2ANY6 5589 aaKnown RBP5.79□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Gm9789Q8BIG3 52 aa5.79□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Birc6O88738 4882 aa5.77□□□□□ -1.48
Ubfd1-201ENSMUST00000033158 Gm38119A0A0A6YX29 146 aa5.76□□□□□ -1.49
Ubfd1-201ENSMUST00000033158 Fat2Q5F226 4351 aa5.74□□□□□ -1.49
Ubfd1-201ENSMUST00000033158 Abca13Q5SSE9 5034 aa5.72□□□□□ -1.49
Ubfd1-201ENSMUST00000033158 Lce3aQ497I5 98 aa5.71□□□□□ -1.5
Ubfd1-201ENSMUST00000033158 Herc1E9PZP8 4859 aa5.68□□□□□ -1.5
Ubfd1-201ENSMUST00000033158 Sprr2iO70560 76 aa5.67□□□□□ -1.5
Ubfd1-201ENSMUST00000033158 Gm10061D3Z714 54 aa5.65□□□□□ -1.51
Ubfd1-201ENSMUST00000033158 4932415D10RikA0A1W2P6U8 4986 aa5.59□□□□□ -1.51
Ubfd1-201ENSMUST00000033158 Pkhd1E9PZ36 4059 aa5.58□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1gQ9D195 139 aa5.55□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1iQ9D6P5 149 aa5.55□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1hQ9D6R3 140 aa5.55□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1fB9EJP6 147 aa5.53□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1cQ9D1C5 147 aa5.53□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1lQ9D1G7 135 aa5.53□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Lce1dQ9D731 133 aa5.53□□□□□ -1.52
Ubfd1-201ENSMUST00000033158 Syne1Q6ZWR6 8799 aa5.51□□□□□ -1.53
Ubfd1-201ENSMUST00000033158 Lce1bQ9D149 137 aa5.5□□□□□ -1.53
Ubfd1-201ENSMUST00000033158 Ubr4A2AN08 5180 aa5.5□□□□□ -1.53
Ubfd1-201ENSMUST00000033158 Gm11569B1AQB1 180 aa5.49□□□□□ -1.53
Ubfd1-201ENSMUST00000033158 Krtap9-3Q3V2C1 136 aa5.47□□□□□ -1.53
Ubfd1-201ENSMUST00000033158 Lce1eQ9D139 143 aa5.42□□□□□ -1.54
Ubfd1-201ENSMUST00000033158 Krtap19-4Q925H7 84 aa5.41□□□□□ -1.54
Ubfd1-201ENSMUST00000033158 Rnf213E9Q555 5152 aaKnown RBP5.4□□□□□ -1.54
Ubfd1-201ENSMUST00000033158 Gm10024A0A0A0MQA4 119 aa5.39□□□□□ -1.55
Ubfd1-201ENSMUST00000033158 Fat4Q2PZL6 4981 aa5.35□□□□□ -1.55
Ubfd1-201ENSMUST00000033158 Sprr2eO70556 76 aa5.35□□□□□ -1.55
Ubfd1-201ENSMUST00000033158 Ush2AQ2QI47 5193 aa5.29□□□□□ -1.56
Ubfd1-201ENSMUST00000033158 Lce1a2Q9D1K4 149 aa5.28□□□□□ -1.56
Ubfd1-201ENSMUST00000033158 Krtap4-2B1AQ85 167 aa5.27□□□□□ -1.57
Ubfd1-201ENSMUST00000033158 Pkhd1l1Q80ZA4 4249 aa5.26□□□□□ -1.57
Ubfd1-201ENSMUST00000033158 ZanO88799 5376 aa5.25□□□□□ -1.57
Ubfd1-201ENSMUST00000033158 Mt4P47945 62 aa5.25□□□□□ -1.57
Ubfd1-201ENSMUST00000033158 Sprr2fO70557 76 aa5.2□□□□□ -1.58
Ubfd1-201ENSMUST00000033158 Krtap4-6Q3V4B7 195 aa5.18□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms