RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 2310057N15RikQ9D6T8 200 aa4.25□□□□□ -1.73
Sf3b1-201ENSMUST00000027127 Dnah7aE9Q0T8 4024 aa4.24□□□□□ -1.73
Sf3b1-201ENSMUST00000027127 Krtap3-1A2A591 98 aa4.18□□□□□ -1.74
Sf3b1-201ENSMUST00000027127 Gm17402F6Z0L5 76 aa4.17□□□□□ -1.74
Sf3b1-201ENSMUST00000027127 B930094E09RikQ8C4T2 136 aa4.17□□□□□ -1.74
Sf3b1-201ENSMUST00000027127 Fat1A0A1L1SQU7 4645 aa4.17□□□□□ -1.74
Sf3b1-201ENSMUST00000027127 Ryr2E9Q401 4966 aaKnown RBP4.11□□□□□ -1.75
Sf3b1-201ENSMUST00000027127 Ryr3A2AGL3 4863 aa4.11□□□□□ -1.75
Sf3b1-201ENSMUST00000027127 Fat2Q5F226 4351 aa4.11□□□□□ -1.75
Sf3b1-201ENSMUST00000027127 Krtap13-1Q8K198 168 aa4.1□□□□□ -1.75
Sf3b1-201ENSMUST00000027127 Ryr1E9PZQ0 5035 aa4.07□□□□□ -1.76
Sf3b1-201ENSMUST00000027127 Dnah8Q91XQ0 4731 aa4.05□□□□□ -1.76
Sf3b1-201ENSMUST00000027127 Pkhd1l1Q80ZA4 4249 aa4.04□□□□□ -1.76
Sf3b1-201ENSMUST00000027127 Fat3Q8BNA6 4555 aa4.04□□□□□ -1.76
Sf3b1-201ENSMUST00000027127 Prm2P07978 107 aa4□□□□□ -1.77
Sf3b1-201ENSMUST00000027127 Krtap1-5A2A590 122 aa3.99□□□□□ -1.77
Sf3b1-201ENSMUST00000027127 Pkhd1E9PZ36 4059 aa3.94□□□□□ -1.78
Sf3b1-201ENSMUST00000027127 A030003K21RikA0A1Y7VIM3 128 aa3.93□□□□□ -1.78
Sf3b1-201ENSMUST00000027127 4933428G20RikQ9D3X4 101 aa3.92□□□□□ -1.78
Sf3b1-201ENSMUST00000027127 Lrp1Q91ZX7 4545 aaKnown RBP3.91□□□□□ -1.78
Sf3b1-201ENSMUST00000027127 Dnhd1D3Z2X2 4750 aa3.91□□□□□ -1.78
Sf3b1-201ENSMUST00000027127 Herc2Q4U2R1 4836 aa3.86□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Mycbp2Q7TPH6 4711 aa3.86□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Kiaa1109A2AAE1 5005 aa3.86□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Sprr2a3Q4KL71 83 aa3.85□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Sprr2a1Q9CQK8 83 aa3.85□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Vps13bQ80TY5 3993 aa3.84□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Birc6O88738 4882 aa3.84□□□□□ -1.79
Sf3b1-201ENSMUST00000027127 Gm19668J3QMD1 248 aa3.83□□□□□ -1.8
Sf3b1-201ENSMUST00000027127 Crct1Q6PAI5 102 aa3.82□□□□□ -1.8
Sf3b1-201ENSMUST00000027127 Kmt2cQ8BRH4 4903 aa3.81□□□□□ -1.8
Sf3b1-201ENSMUST00000027127 Gm10318A0A1W2P728 225 aa3.81□□□□□ -1.8
Sf3b1-201ENSMUST00000027127 Krtap1-4Q3V2D6 188 aa3.76□□□□□ -1.81
Sf3b1-201ENSMUST00000027127 Abca13Q5SSE9 5034 aa3.74□□□□□ -1.81
Sf3b1-201ENSMUST00000027127 Krtap16-3Q8C1I6 86 aa3.73□□□□□ -1.81
Sf3b1-201ENSMUST00000027127 Gm19402J3QJV4 266 aa3.71□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Lce1mQ9CR91 182 aa3.7□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Krtap19-1Q925H2 87 aa3.69□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Krtap7-1Q9D3I6 87 aa3.69□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Krtap19-3Q925H6 87 aa3.68□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Gm6217A0A1Y7VJK9 128 aa3.67□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Krtap19-9aF8WH65 55 aa3.66□□□□□ -1.82
Sf3b1-201ENSMUST00000027127 Lrp2A2ARV4 4660 aa3.65□□□□□ -1.83
Sf3b1-201ENSMUST00000027127 HydinQ80W93 5154 aa3.64□□□□□ -1.83
Sf3b1-201ENSMUST00000027127 Krtap12-1Q9Z287 130 aa3.61□□□□□ -1.83
Sf3b1-201ENSMUST00000027127 Herc1E9PZP8 4859 aa3.6□□□□□ -1.83
Sf3b1-201ENSMUST00000027127 Gm18596A0A1W2P860 280 aa3.6□□□□□ -1.83
Sf3b1-201ENSMUST00000027127 LorP18165 486 aa3.58□□□□□ -1.84
Sf3b1-201ENSMUST00000027127 Gm6358A0A087WPH4 74 aa3.55□□□□□ -1.84
Sf3b1-201ENSMUST00000027127 Prm1P02319 51 aa3.55□□□□□ -1.84
Sf3b1-201ENSMUST00000027127 PcloQ9QYX7 5068 aa3.51□□□□□ -1.85
Sf3b1-201ENSMUST00000027127 Krtap1-3A2A588 173 aa3.48□□□□□ -1.85
Sf3b1-201ENSMUST00000027127 Gm9789Q8BIG3 52 aa3.48□□□□□ -1.85
Sf3b1-201ENSMUST00000027127 Krtap19-9bQ99NG9 58 aa3.47□□□□□ -1.85
Sf3b1-201ENSMUST00000027127 Krtap8-1O08633 61 aa3.46□□□□□ -1.86
Sf3b1-201ENSMUST00000027127 Krtap28-10A0A1Y7VP58 119 aa3.45□□□□□ -1.86
Sf3b1-201ENSMUST00000027127 Sprr2kO70562 68 aa3.45□□□□□ -1.86
Sf3b1-201ENSMUST00000027127 Gm7735D3YX18 52 aa3.44□□□□□ -1.86
Sf3b1-201ENSMUST00000027127 A0A1Y7VJH8 109 aa3.39□□□□□ -1.87
Sf3b1-201ENSMUST00000027127 Lce1jD3YUU5 139 aa3.37□□□□□ -1.87
Sf3b1-201ENSMUST00000027127 Gm7544A0A1Y7VJ58 118 aa3.35□□□□□ -1.87
Sf3b1-201ENSMUST00000027127 4932415D10RikA0A1W2P6U8 4986 aa3.35□□□□□ -1.87
Sf3b1-201ENSMUST00000027127 Krtap9-5A2A5X3 358 aa3.35□□□□□ -1.87
Sf3b1-201ENSMUST00000027127 Krtap19-2Q925I0 141 aa3.32□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 Ush2AQ2QI47 5193 aa3.31□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 ZanO88799 5376 aa3.3□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 Sprr2gO70558 76 aa3.3□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 Rnf213E9Q555 5152 aaKnown RBP3.29□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 A0A1Y7VJ07 166 aa3.28□□□□□ -1.88
Sf3b1-201ENSMUST00000027127 2310046K23RikA0A0A6YVW6 87 aa3.27□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 Hmcn2A2AJ76 5100 aa3.27□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 Fat4Q2PZL6 4981 aa3.27□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 Krtap28-13A0A087WQP5 138 aa3.26□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 Ubr4A2AN08 5180 aa3.24□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 A030005L19RikA0A1Y7VIU2 113 aa3.22□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 A030005K14RikA0A1Y7VNY1 122 aa3.22□□□□□ -1.89
Sf3b1-201ENSMUST00000027127 Gm10061D3Z714 54 aa3.19□□□□□ -1.9
Sf3b1-201ENSMUST00000027127 Mt2P02798 61 aa3.18□□□□□ -1.9
Sf3b1-201ENSMUST00000027127 Lce1iQ9D6P5 149 aa3.17□□□□□ -1.9
Sf3b1-201ENSMUST00000027127 SspoQ8CG65 4998 aa3.13□□□□□ -1.91
Sf3b1-201ENSMUST00000027127 Lce1a2Q9D1K4 149 aa3.12□□□□□ -1.91
Sf3b1-201ENSMUST00000027127 Lce3bQ9CQM7 98 aa3.09□□□□□ -1.91
Sf3b1-201ENSMUST00000027127 Krtap22-2J3QNX6 67 aa3.08□□□□□ -1.92
Sf3b1-201ENSMUST00000027127 Muc5bE9Q5I3 4800 aa3.04□□□□□ -1.92
Sf3b1-201ENSMUST00000027127 Lce3cQ91V05 98 aa3.04□□□□□ -1.92
Sf3b1-201ENSMUST00000027127 Krtap17-1A2A5X6 109 aa3.02□□□□□ -1.93
Sf3b1-201ENSMUST00000027127 Gm11569B1AQB1 180 aa3□□□□□ -1.93
Sf3b1-201ENSMUST00000027127 A030014E15RikA0A1Y7VJV2 120 aa2.97□□□□□ -1.93
Sf3b1-201ENSMUST00000027127 Gm10272F7CZ33 110 aa2.96□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Gm10100J3QK64 120 aa2.96□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Lce3dE9Q8V1 98 aa2.93□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Lce3eF8VQJ0 98 aa2.93□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Lce3fQ6PAI4 98 aa2.93□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Lce1hQ9D6R3 140 aa2.93□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Sprr2iO70560 76 aa2.92□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Krtap9-3Q3V2C1 136 aa2.91□□□□□ -1.94
Sf3b1-201ENSMUST00000027127 Gm10142J3KMP7 120 aa2.89□□□□□ -1.95
Sf3b1-201ENSMUST00000027127 Lce3aQ497I5 98 aa2.86□□□□□ -1.95
Sf3b1-201ENSMUST00000027127 Sprr2fO70557 76 aa2.85□□□□□ -1.95
Sf3b1-201ENSMUST00000027127 Mdn1A2ANY6 5589 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 103.6 ms