RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Ndufaf8A2AMZ4 74 aa5.1□□□□□ -1.59
Echdc1-201ENSMUST00000020034 Fat2Q5F226 4351 aa5.1□□□□□ -1.59
Echdc1-201ENSMUST00000020034 Fat3Q8BNA6 4555 aa5.07□□□□□ -1.6
Echdc1-201ENSMUST00000020034 A0A1Y7VJH8 109 aa5.07□□□□□ -1.6
Echdc1-201ENSMUST00000020034 Sec61bQ9CQS8 96 aaKnown RBP5.04□□□□□ -1.6
Echdc1-201ENSMUST00000020034 Fam229aB2KGE5 128 aa5.01□□□□□ -1.61
Echdc1-201ENSMUST00000020034 Pkhd1E9PZ36 4059 aa5.01□□□□□ -1.61
Echdc1-201ENSMUST00000020034 Krtap13-1Q8K198 168 aa4.99□□□□□ -1.61
Echdc1-201ENSMUST00000020034 Mycbp2Q7TPH6 4711 aa4.97□□□□□ -1.61
Echdc1-201ENSMUST00000020034 Gm10318A0A1W2P728 225 aa4.96□□□□□ -1.62
Echdc1-201ENSMUST00000020034 Camk2n1Q6QWF9 78 aa4.94□□□□□ -1.62
Echdc1-201ENSMUST00000020034 Pkhd1l1Q80ZA4 4249 aa4.94□□□□□ -1.62
Echdc1-201ENSMUST00000020034 Ryr1E9PZQ0 5035 aa4.93□□□□□ -1.62
Echdc1-201ENSMUST00000020034 Krtap28-10A0A1Y7VP58 119 aa4.89□□□□□ -1.63
Echdc1-201ENSMUST00000020034 Prm2P07978 107 aa4.86□□□□□ -1.63
Echdc1-201ENSMUST00000020034 Crct1Q6PAI5 102 aa4.86□□□□□ -1.63
Echdc1-201ENSMUST00000020034 HydinQ80W93 5154 aa4.85□□□□□ -1.63
Echdc1-201ENSMUST00000020034 Abca13Q5SSE9 5034 aa4.84□□□□□ -1.63
Echdc1-201ENSMUST00000020034 Gm17402F6Z0L5 76 aa4.83□□□□□ -1.64
Echdc1-201ENSMUST00000020034 Gm40193A0A1B0GT39 78 aa4.82□□□□□ -1.64
Echdc1-201ENSMUST00000020034 Krtap7-1Q9D3I6 87 aa4.81□□□□□ -1.64
Echdc1-201ENSMUST00000020034 Gm19402J3QJV4 266 aa4.81□□□□□ -1.64
Echdc1-201ENSMUST00000020034 Kiaa1109A2AAE1 5005 aa4.81□□□□□ -1.64
Echdc1-201ENSMUST00000020034 Lrp2A2ARV4 4660 aa4.76□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Kmt2cQ8BRH4 4903 aa4.76□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Ryr2E9Q401 4966 aaKnown RBP4.74□□□□□ -1.65
Echdc1-201ENSMUST00000020034 A0A1Y7VLE6 161 aa4.74□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Gm19668J3QMD1 248 aa4.73□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Herc2Q4U2R1 4836 aa4.73□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Dnah8Q91XQ0 4731 aa4.71□□□□□ -1.65
Echdc1-201ENSMUST00000020034 Krtap1-5A2A590 122 aa4.7□□□□□ -1.66
Echdc1-201ENSMUST00000020034 Gm9112A2AI92 75 aa4.7□□□□□ -1.66
Echdc1-201ENSMUST00000020034 Krtap28-13A0A087WQP5 138 aa4.69□□□□□ -1.66
Echdc1-201ENSMUST00000020034 Sprr2a3Q4KL71 83 aa4.66□□□□□ -1.66
Echdc1-201ENSMUST00000020034 Sprr2a1Q9CQK8 83 aa4.66□□□□□ -1.66
Echdc1-201ENSMUST00000020034 Tnp1P10856 55 aa4.57□□□□□ -1.68
Echdc1-201ENSMUST00000020034 A030005L19RikA0A1Y7VIU2 113 aa4.54□□□□□ -1.68
Echdc1-201ENSMUST00000020034 Krtap16-3Q8C1I6 86 aa4.53□□□□□ -1.68
Echdc1-201ENSMUST00000020034 Dnhd1D3Z2X2 4750 aa4.52□□□□□ -1.69
Echdc1-201ENSMUST00000020034 A030005K14RikA0A1Y7VNY1 122 aa4.52□□□□□ -1.69
Echdc1-201ENSMUST00000020034 Krtap1-4Q3V2D6 188 aa4.47□□□□□ -1.69
Echdc1-201ENSMUST00000020034 Krtap19-1Q925H2 87 aa4.43□□□□□ -1.7
Echdc1-201ENSMUST00000020034 Krtap19-3Q925H6 87 aa4.43□□□□□ -1.7
Echdc1-201ENSMUST00000020034 PcloQ9QYX7 5068 aa4.4□□□□□ -1.71
Echdc1-201ENSMUST00000020034 Birc6O88738 4882 aa4.39□□□□□ -1.71
Echdc1-201ENSMUST00000020034 Gm7544A0A1Y7VJ58 118 aa4.36□□□□□ -1.71
Echdc1-201ENSMUST00000020034 LorP18165 486 aa4.33□□□□□ -1.72
Echdc1-201ENSMUST00000020034 Krtap4-1Q3UUY3 169 aa4.32□□□□□ -1.72
Echdc1-201ENSMUST00000020034 Krtap19-9aF8WH65 55 aa4.29□□□□□ -1.72
Echdc1-201ENSMUST00000020034 Krtap12-1Q9Z287 130 aa4.29□□□□□ -1.72
Echdc1-201ENSMUST00000020034 Herc1E9PZP8 4859 aa4.28□□□□□ -1.72
Echdc1-201ENSMUST00000020034 Lce1jD3YUU5 139 aa4.26□□□□□ -1.73
Echdc1-201ENSMUST00000020034 Ubr4A2AN08 5180 aa4.25□□□□□ -1.73
Echdc1-201ENSMUST00000020034 Fat4Q2PZL6 4981 aa4.24□□□□□ -1.73
Echdc1-201ENSMUST00000020034 ZanO88799 5376 aa4.22□□□□□ -1.73
Echdc1-201ENSMUST00000020034 A0A1Y7VJ07 166 aa4.15□□□□□ -1.75
Echdc1-201ENSMUST00000020034 Krtap1-3A2A588 173 aa4.14□□□□□ -1.75
Echdc1-201ENSMUST00000020034 4932415D10RikA0A1W2P6U8 4986 aa4.12□□□□□ -1.75
Echdc1-201ENSMUST00000020034 Gm11555B1AQ89 175 aa4.12□□□□□ -1.75
Echdc1-201ENSMUST00000020034 Krtap19-9bQ99NG9 58 aa4.11□□□□□ -1.75
Echdc1-201ENSMUST00000020034 Lce1mQ9CR91 182 aa4.08□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Gm18596A0A1W2P860 280 aa4.06□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Krtap8-1O08633 61 aa4.06□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Ush2AQ2QI47 5193 aa4.05□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Krtap17-1A2A5X6 109 aa4.04□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Rnf213E9Q555 5152 aaKnown RBP4.03□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Hmcn2A2AJ76 5100 aa4.03□□□□□ -1.76
Echdc1-201ENSMUST00000020034 Krtap9-5A2A5X3 358 aa4.01□□□□□ -1.77
Echdc1-201ENSMUST00000020034 Gm11563B1AQ90 168 aa3.98□□□□□ -1.77
Echdc1-201ENSMUST00000020034 Krtap4-7Q9D732 168 aa3.98□□□□□ -1.77
Echdc1-201ENSMUST00000020034 2310046K23RikA0A0A6YVW6 87 aa3.98□□□□□ -1.77
Echdc1-201ENSMUST00000020034 A030014E15RikA0A1Y7VJV2 120 aa3.95□□□□□ -1.78
Echdc1-201ENSMUST00000020034 Krtap19-2Q925I0 141 aa3.95□□□□□ -1.78
Echdc1-201ENSMUST00000020034 Lce1iQ9D6P5 149 aa3.95□□□□□ -1.78
Echdc1-201ENSMUST00000020034 A030003K21RikA0A1Y7VIM3 128 aa3.93□□□□□ -1.78
Echdc1-201ENSMUST00000020034 Lce1a2Q9D1K4 149 aa3.92□□□□□ -1.78
Echdc1-201ENSMUST00000020034 Krtap9-3Q3V2C1 136 aa3.91□□□□□ -1.78
Echdc1-201ENSMUST00000020034 Gm9789Q8BIG3 52 aa3.86□□□□□ -1.79
Echdc1-201ENSMUST00000020034 4933428G20RikQ9D3X4 101 aa3.85□□□□□ -1.79
Echdc1-201ENSMUST00000020034 Lce1hQ9D6R3 140 aa3.83□□□□□ -1.8
Echdc1-201ENSMUST00000020034 Gm7735D3YX18 52 aa3.8□□□□□ -1.8
Echdc1-201ENSMUST00000020034 Prm1P02319 51 aa3.8□□□□□ -1.8
Echdc1-201ENSMUST00000020034 Mt2P02798 61 aa3.8□□□□□ -1.8
Echdc1-201ENSMUST00000020034 Mdn1A2ANY6 5589 aaKnown RBP3.77□□□□□ -1.81
Echdc1-201ENSMUST00000020034 Gm6358A0A087WPH4 74 aa3.74□□□□□ -1.81
Echdc1-201ENSMUST00000020034 Gm6217A0A1Y7VJK9 128 aa3.7□□□□□ -1.82
Echdc1-201ENSMUST00000020034 Gm10272F7CZ33 110 aa3.68□□□□□ -1.82
Echdc1-201ENSMUST00000020034 Lce1dQ9D731 133 aa3.64□□□□□ -1.83
Echdc1-201ENSMUST00000020034 Gm10061D3Z714 54 aa3.63□□□□□ -1.83
Echdc1-201ENSMUST00000020034 Krtap22-2J3QNX6 67 aa3.59□□□□□ -1.83
Echdc1-201ENSMUST00000020034 SspoQ8CG65 4998 aa3.58□□□□□ -1.84
Echdc1-201ENSMUST00000020034 Sprr2gO70558 76 aa3.56□□□□□ -1.84
Echdc1-201ENSMUST00000020034 A0A286YCP9 139 aa3.55□□□□□ -1.84
Echdc1-201ENSMUST00000020034 Gm10100J3QK64 120 aa3.52□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Muc5bE9Q5I3 4800 aa3.5□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Lce1eQ9D139 143 aa3.49□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Gm11938Q9D3H4 131 aa3.49□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Krtap4-2B1AQ85 167 aa3.48□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Lce3bQ9CQM7 98 aa3.47□□□□□ -1.85
Echdc1-201ENSMUST00000020034 Syne1Q6ZWR6 8799 aa3.45□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms