RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YPL108WQ02872 168 aaPredicted RBP2.5□□□□□ -2.01
VPS16YPL045W NOP12Q08208 459 aaKnown RBP2.5□□□□□ -2.01
VPS16YPL045W YDL177CQ12257 170 aa2.5□□□□□ -2.01
VPS16YPL045W VCX1Q99385 411 aa2.5□□□□□ -2.01
VPS16YPL045W SMC4Q12267 1418 aa2.49□□□□□ -2.01
VPS16YPL045W CBS1P14066 229 aa2.49□□□□□ -2.01
VPS16YPL045W PEP3P27801 918 aa2.49□□□□□ -2.01
VPS16YPL045W EFT1P32324 842 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W MSS1P32559 526 aaPredicted RBP2.49□□□□□ -2.01
VPS16YPL045W BCS1P32839 456 aa2.49□□□□□ -2.01
VPS16YPL045W GEX2P36173 615 aa2.49□□□□□ -2.01
VPS16YPL045W FMO1P38866 432 aa2.49□□□□□ -2.01
VPS16YPL045W CAJ1P39101 391 aa2.49□□□□□ -2.01
VPS16YPL045W YJL193WP39542 402 aa2.49□□□□□ -2.01
VPS16YPL045W MEF2P39677 819 aa2.49□□□□□ -2.01
VPS16YPL045W NUP60P39705 539 aa2.49□□□□□ -2.01
VPS16YPL045W TMN3P40071 706 aa2.49□□□□□ -2.01
VPS16YPL045W JEM1P40358 645 aa2.49□□□□□ -2.01
VPS16YPL045W AAD10P47182 288 aa2.49□□□□□ -2.01
VPS16YPL045W RFX1P48743 811 aa2.49□□□□□ -2.01
VPS16YPL045W YPL034WQ03083 165 aa2.49□□□□□ -2.01
VPS16YPL045W NGL2Q03264 515 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W YAP6Q03935 383 aa2.49□□□□□ -2.01
VPS16YPL045W YLR345WQ06137 509 aa2.49□□□□□ -2.01
VPS16YPL045W RCN2Q12044 265 aa2.49□□□□□ -2.01
VPS16YPL045W PNO1Q99216 274 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W NTE1Q04958 1679 aa2.49□□□□□ -2.01
VPS16YPL045W STU1P38198 1513 aa2.49□□□□□ -2.01
VPS16YPL045W TPM1P17536 199 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W PRE10P21242 288 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VPS16YPL045W PRE8P23639 250 aa2.49□□□□□ -2.01
VPS16YPL045W OCA4P25366 362 aa2.49□□□□□ -2.01
VPS16YPL045W KAR4P25583 335 aa2.49□□□□□ -2.01
VPS16YPL045W SWC3P31376 625 aa2.49□□□□□ -2.01
VPS16YPL045W DPH2P32461 534 aa2.49□□□□□ -2.01
VPS16YPL045W ALY1P36117 915 aa2.49□□□□□ -2.01
VPS16YPL045W UBP13P38187 747 aa2.49□□□□□ -2.01
VPS16YPL045W TDP1P38319 544 aa2.49□□□□□ -2.01
VPS16YPL045W MPT5P39016 859 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
VPS16YPL045W YEL057CP39983 233 aa2.49□□□□□ -2.01
VPS16YPL045W UBP7P40453 1071 aa2.49□□□□□ -2.01
VPS16YPL045W SKP2P42843 763 aa2.49□□□□□ -2.01
VPS16YPL045W LSB3P43603 459 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W ASE1P50275 885 aa2.49□□□□□ -2.01
VPS16YPL045W YGR054WP53235 642 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W PIL1P53252 339 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W YNR061CP53747 219 aa2.49□□□□□ -2.01
VPS16YPL045W SNO2P53823 222 aa2.49□□□□□ -2.01
VPS16YPL045W INN1P53901 409 aa2.49□□□□□ -2.01
VPS16YPL045W ERG5P54781 538 aa2.49□□□□□ -2.01
VPS16YPL045W MUB1Q03162 620 aa2.49□□□□□ -2.01
VPS16YPL045W CLU1Q03690 1277 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W HOF1Q05080 669 aa2.49□□□□□ -2.01
VPS16YPL045W YDR286CQ05530 114 aa2.49□□□□□ -2.01
VPS16YPL045W RXT3Q07458 294 aa2.49□□□□□ -2.01
VPS16YPL045W NUS1Q12063 375 aa2.49□□□□□ -2.01
VPS16YPL045W GET3Q12154 354 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W GRX6Q12438 231 aa2.49□□□□□ -2.01
VPS16YPL045W NOP58Q12499 511 aaKnown RBP2.49□□□□□ -2.01
VPS16YPL045W RPO21P04050 1733 aaKnown RBP2.48□□□□□ -2.01
VPS16YPL045W CHD1P32657 1468 aa2.48□□□□□ -2.01
VPS16YPL045W LAT1P12695 482 aaKnown RBP2.48□□□□□ -2.01
VPS16YPL045W GCD7P32502 381 aaPredicted RBP2.48□□□□□ -2.01
VPS16YPL045W DSS4P32601 143 aa2.48□□□□□ -2.01
VPS16YPL045W SRO77P38163 1010 aa2.48□□□□□ -2.01
VPS16YPL045W SKN7P38889 622 aa2.48□□□□□ -2.01
VPS16YPL045W PLB1P39105 664 aa2.48□□□□□ -2.01
VPS16YPL045W BUD16P39988 312 aa2.48□□□□□ -2.01
VPS16YPL045W ICP55P40051 511 aa2.48□□□□□ -2.01
VPS16YPL045W YJL068CP40363 299 aa2.48□□□□□ -2.01
VPS16YPL045W PFK26P40433 827 aaKnown RBP2.48□□□□□ -2.01
VPS16YPL045W FKH2P41813 862 aa2.48□□□□□ -2.01
VPS16YPL045W IDS2P46958 469 aa2.48□□□□□ -2.01
VPS16YPL045W ATP22P50273 684 aaPredicted RBP2.48□□□□□ -2.01
VPS16YPL045W YOR352WQ08816 343 aa2.48□□□□□ -2.01
VPS16YPL045W ISA2Q12425 185 aa2.48□□□□□ -2.01
VPS16YPL045W YOL159C-AQ3E769 90 aa2.48□□□□□ -2.01
VPS16YPL045W PAN1P32521 1480 aa2.48□□□□□ -2.01
VPS16YPL045W CET1O13297 549 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W TRP3P00937 484 aa2.47□□□□□ -2.01
VPS16YPL045W CPA2P03965 1118 aaKnown RBP2.47□□□□□ -2.01
VPS16YPL045W PMS1P14242 873 aa2.47□□□□□ -2.01
VPS16YPL045W VPS34P22543 875 aa2.47□□□□□ -2.01
VPS16YPL045W KRR1P25586 316 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W URK1P27515 501 aa2.47□□□□□ -2.01
VPS16YPL045W RTS1P38903 757 aa2.47□□□□□ -2.01
VPS16YPL045W JHD1P40034 492 aa2.47□□□□□ -2.01
VPS16YPL045W SLZ1P40167 298 aa2.47□□□□□ -2.01
VPS16YPL045W RGI2P40188 164 aa2.47□□□□□ -2.01
VPS16YPL045W MTG1Q03151 367 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W RMT2Q03305 412 aa2.47□□□□□ -2.01
VPS16YPL045W CRF1Q04930 467 aa2.47□□□□□ -2.01
VPS16YPL045W ECM22Q05958 814 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W CHS5Q12114 671 aaKnown RBP2.47□□□□□ -2.01
VPS16YPL045W ERG27Q12452 347 aaKnown RBP2.47□□□□□ -2.01
VPS16YPL045W MYO4P32492 1471 aa2.47□□□□□ -2.01
VPS16YPL045W POL4P25615 582 aa2.47□□□□□ -2.01
VPS16YPL045W YCR061WP25639 631 aa2.47□□□□□ -2.01
VPS16YPL045W ADK2P26364 225 aa2.47□□□□□ -2.01
VPS16YPL045W CAP1P28495 268 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms