RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	YAK1	P14680	807 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	MET16	P18408	261 aa	Predicted RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	ATP12	P22135	325 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	SSA4	P22202	642 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	VPS34	P22543	875 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	GFD2	P25370	566 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	ZUO1	P32527	433 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	GDA1	P32621	518 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	SRP101	P32916	621 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	CSE2	P33308	149 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	10.43	□□□□□ -0.74	not detected
YCL074W	YCL074W	AST1	P35183	429 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	ATG12	P38316	186 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	SRP68	P38687	599 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	SEC31	P38968	1273 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	CDC1	P40986	491 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	ASN2	P49090	572 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	YGR016W	P53209	190 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	BRE5	P53741	515 aa	Known RBP	10.43	□□□□□ -0.74
YCL074W	YCL074W	MET14	Q02196	202 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	ARP7	Q12406	477 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	NKP1	Q12493	238 aa		10.43	□□□□□ -0.74
YCL074W	YCL074W	CAR1	P00812	333 aa	Known RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	RPL17A	P05740	184 aa	Known RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	URA4	P20051	364 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	YIH1	P25637	258 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	GCD11	P32481	527 aa	Known RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	YKR078W	P36158	585 aa	Known RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	YHI9	P38765	294 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	YHR182W	P38870	785 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	GUF1	P46943	645 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	RPL17B	P46990	184 aa	Known RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	CUS2	P53830	285 aa	Predicted RBP	10.42	□□□□□ -0.74
YCL074W	YCL074W	NHX1	Q04121	633 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	YET2	Q04210	160 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	ARA2	Q04212	335 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	HRD3	Q05787	833 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	ENT4	Q07872	247 aa		10.42	□□□□□ -0.74
YCL074W	YCL074W	CCP1	P00431	361 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	HIS1	P00498	297 aa	Known RBP	10.41	□□□□□ -0.74
YCL074W	YCL074W	RGR1	P19263	1082 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	PAT1	P25644	796 aa	Known RBP	10.41	□□□□□ -0.74
YCL074W	YCL074W	DAL1	P32375	460 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	RIM4	P38741	713 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	MGS1	P40151	587 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	ESL1	P40456	1118 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	ROK1	P45818	564 aa	Predicted RBP	10.41	□□□□□ -0.74
YCL074W	YCL074W	YMR155W	Q03795	547 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	HPT1	Q04178	221 aa	Known RBP	10.41	□□□□□ -0.74
YCL074W	YCL074W	JIP5	Q06214	492 aa	Predicted RBP	10.41	□□□□□ -0.74
YCL074W	YCL074W	ESC8	Q08119	714 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	SLD7	Q08457	257 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	ADF1	Q2V2Q1	113 aa		10.41	□□□□□ -0.74
YCL074W	YCL074W	ERG20	P08524	352 aa	Known RBP	10.4	□□□□□ -0.74
YCL074W	YCL074W	CIT2	P08679	460 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	APE1	P14904	514 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	10.4	□□□□□ -0.74	not detected
YCL074W	YCL074W	SEC15	P22224	910 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	MEF1	P25039	761 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	ADY2	P25613	283 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	TFC1	P32367	649 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	MRS6	P32864	603 aa	Known RBP	10.4	□□□□□ -0.74
YCL074W	YCL074W	INP51	P40559	946 aa	Known RBP	10.4	□□□□□ -0.74
YCL074W	YCL074W	NCS6	P53088	359 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	10.4	□□□□□ -0.74	not detected
YCL074W	YCL074W	ADE12	P80210	433 aa	Known RBP	10.4	□□□□□ -0.74
YCL074W	YCL074W	SPG3	Q04398	127 aa	Predicted RBP	10.4	□□□□□ -0.74
YCL074W	YCL074W	YKU80	Q04437	629 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	SEC10	Q06245	871 aa		10.4	□□□□□ -0.74
YCL074W	YCL074W	COX6	P00427	148 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	SAN1	P22470	610 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	FUB1	P25659	250 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	ZIP1	P31111	875 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	BIO2	P32451	375 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	ASK1	P35734	292 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	FUI1	P38196	639 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	YBR259W	P38338	688 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	TDA11	P38854	504 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	EDC3	P39998	551 aa	Known RBP	10.39	□□□□□ -0.75
YCL074W	YCL074W	IAH1	P41734	238 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	CNN1	P43618	361 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	VMA10	P48836	114 aa	Known RBP	10.39	□□□□□ -0.75
YCL074W	YCL074W	SIW14	P53965	281 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	PRO2	P54885	456 aa	Known RBP	10.39	□□□□□ -0.75
YCL074W	YCL074W	CSN9	Q03981	162 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	ATG26	Q06321	1198 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	PMT7	Q06644	662 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	BUD20	Q08004	166 aa	Predicted RBP	10.39	□□□□□ -0.75
YCL074W	YCL074W	SUT2	Q12286	268 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	LDB19	Q12502	818 aa		10.39	□□□□□ -0.75
YCL074W	YCL074W	HSH49	Q99181	213 aa	Predicted RBP	10.39	□□□□□ -0.75
YCL074W	YCL074W	ATP2	P00830	511 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	HAP2	P06774	265 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	NMT1	P14743	455 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	TAL1	P15019	335 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	MSB1	P21339	1137 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	MET4	P32389	672 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	EAP1	P36041	632 aa	Known RBP	10.38	□□□□□ -0.75
YCL074W	YCL074W	GIP1	P38229	639 aa		10.38	□□□□□ -0.75
YCL074W	YCL074W	TGL3	P40308	642 aa		10.38	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms