RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 IREB2P48200 963 aaKnown RBP14.55□□□□□ -0.08
LINC00339-213ENST00000642137 FKBP1BP68106 108 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 TFAP4Q01664 338 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 FSTL1Q12841 308 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 RRP12Q5JTH9 1297 aaKnown RBP14.55□□□□□ -0.08
LINC00339-213ENST00000642137 ARMC9Q7Z3E5 817 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 NEDD1Q8NHV4 660 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 JAKMIP1Q96N16 626 aaKnown RBP14.55□□□□□ -0.08
LINC00339-213ENST00000642137 MTA3Q9BTC8 594 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 CABP5Q9NP86 173 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 ZSWIM5Q9P217 1185 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 NEDD4P46934 1319 aa14.55□□□□□ -0.08
LINC00339-213ENST00000642137 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 KDM4AO75164 1064 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 MCM5P33992 734 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 CAP2P40123 477 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 MAP3K9P80192 1104 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
LINC00339-213ENST00000642137 FMR1Q06787 632 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00339-213ENST00000642137 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
LINC00339-213ENST00000642137 ABCB5Q2M3G0 1257 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 DHX32Q7L7V1 743 aaKnown RBP14.54□□□□□ -0.08
LINC00339-213ENST00000642137 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-213ENST00000642137 KIF2CQ99661 725 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 PASKQ96RG2 1323 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 SSC5DA1L4H1 1573 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 TRPM7Q96QT4 1865 aa14.54□□□□□ -0.08
LINC00339-213ENST00000642137 WDR19Q8NEZ3 1342 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 TSPY3P0CV98 308 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 TSPY8P0CW00 308 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 AKR1B1P15121 316 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 PRKG1Q13976 671 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 BLOC1S2Q6QNY1 142 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 RUFY3Q7L099 469 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 C2orf69Q8N8R5 385 aa14.53□□□□□ -0.08
LINC00339-213ENST00000642137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00339-213ENST00000642137 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-213ENST00000642137 ANGEL1Q9UNK9 670 aaKnown RBP14.53□□□□□ -0.08
LINC00339-213ENST00000642137 CELF2O95319 508 aaKnown RBP14.52□□□□□ -0.09
LINC00339-213ENST00000642137 ASNSP08243 561 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
LINC00339-213ENST00000642137 RPS6KB1P23443 525 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 TTLL12Q14166 644 aaPredicted RBP14.52□□□□□ -0.09
LINC00339-213ENST00000642137 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 NOL9Q5SY16 702 aaKnown RBP14.52□□□□□ -0.09
LINC00339-213ENST00000642137 LDLRAD1Q5T700 205 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 CST9Q5W186 159 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 TMEM179Q6ZVK1 233 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 CYB5R4Q7L1T6 521 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 IQCA1Q86XH1 822 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 ANKRD13AQ8IZ07 590 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 NKX2-3Q8TAU0 364 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 TTC14Q96N46 770 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 WRNIP1Q96S55 665 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.52□□□□□ -0.09
LINC00339-213ENST00000642137 ZNF408Q9H9D4 720 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 FZD1Q9UP38 647 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 CYP46A1Q9Y6A2 500 aa14.52□□□□□ -0.09
LINC00339-213ENST00000642137 PLIN4Q96Q06 1357 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 IGKV6D-41A0A0C4DH26 115 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 MPHOSPH10O00566 681 aaKnown RBP14.51□□□□□ -0.09
LINC00339-213ENST00000642137 GDF11O95390 407 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 GH2P01242 217 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 INPP5BP32019 993 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 ANTXR2P58335 489 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 JAG1P78504 1218 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 RABEP1Q15276 862 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-213ENST00000642137 SCYL3Q8IZE3 742 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 FBXL16Q8N461 479 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 ANKS1AQ92625 1134 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 TMEM87BQ96K49 555 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-213ENST00000642137 KANSL2Q9H9L4 492 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 IL17RBQ9NRM6 502 aa14.51□□□□□ -0.09
LINC00339-213ENST00000642137 PRC1O43663 620 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 GUCY1A2P33402 732 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 NOVP48745 357 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
LINC00339-213ENST00000642137 DGKHQ86XP1 1220 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 TMTC2Q8N394 836 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-213ENST00000642137 ZSCAN10Q96SZ4 725 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-213ENST00000642137 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 CSADQ9Y600 493 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 PAPPA2Q9BXP8 1791 aa14.5□□□□□ -0.09
LINC00339-213ENST00000642137 GREB1LQ9C091 1923 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-213ENST00000642137 ERICH2A1L162 156 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 UBE2Q2LH0YL09 131 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
LINC00339-213ENST00000642137 CPA1P15085 419 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 NEK4P51957 841 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-213ENST00000642137 SEPT2Q15019 361 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 MOB2Q70IA6 237 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms