RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GLIS2Q9BZE0 524 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-230ENST00000641927 GPBP1L1Q9HC44 474 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-230ENST00000641927 MPHOSPH10O00566 681 aaKnown RBP20.6■□□□□ 0.89
PHGDH-230ENST00000641927 MAP1SQ66K74 1059 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-230ENST00000641927 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
PHGDH-230ENST00000641927 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
PHGDH-230ENST00000641927 UBAC1Q9BSL1 405 aa20.6■□□□□ 0.89
PHGDH-230ENST00000641927 TAOK2Q9UL54 1235 aa20.6■□□□□ 0.89
PHGDH-230ENST00000641927 TBC1D12O60347 775 aa20.59■□□□□ 0.89
PHGDH-230ENST00000641927 ANTXR2P58335 489 aa20.59■□□□□ 0.89
PHGDH-230ENST00000641927 EXOSC10Q01780 885 aaKnown RBP20.59■□□□□ 0.89
PHGDH-230ENST00000641927 SUPT20HL1Q3ZLR7 823 aa20.59■□□□□ 0.89
PHGDH-230ENST00000641927 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-230ENST00000641927 METTL16Q86W50 562 aaKnown RBP20.59■□□□□ 0.89
PHGDH-230ENST00000641927 SART3Q15020 963 aaKnown RBP20.58■□□□□ 0.89
PHGDH-230ENST00000641927 DCAF15Q66K64 600 aa20.58■□□□□ 0.89
PHGDH-230ENST00000641927 Q6ZUG5 572 aa20.58■□□□□ 0.89
PHGDH-230ENST00000641927 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.89
PHGDH-230ENST00000641927 IQCA1Q86XH1 822 aa20.58■□□□□ 0.89
PHGDH-230ENST00000641927 MYH8P13535 1937 aa20.58■□□□□ 0.89
PHGDH-230ENST00000641927 ERICH2A1L162 156 aa20.58■□□□□ 0.88
PHGDH-230ENST00000641927 IFIT3O14879 490 aaKnown RBP20.58■□□□□ 0.88
PHGDH-230ENST00000641927 NT5C2P49902 561 aa20.58■□□□□ 0.88
PHGDH-230ENST00000641927 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.88
PHGDH-230ENST00000641927 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 NMT2O60551 498 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 GDF11O95390 407 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 AKR1B1P15121 316 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 AK2P54819 239 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 PRKG1Q13976 671 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 TMEM67Q5HYA8 995 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 CDCA5Q96FF9 252 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 CCDC17Q96LX7 622 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 TTC14Q96N46 770 aa20.57■□□□□ 0.88
PHGDH-230ENST00000641927 NF2P35240 595 aa20.56■□□□□ 0.88
PHGDH-230ENST00000641927 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
PHGDH-230ENST00000641927 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-230ENST00000641927 LARP6Q9BRS8 491 aaKnown RBP20.56■□□□□ 0.88
PHGDH-230ENST00000641927 TNKSO95271 1327 aa20.55■□□□□ 0.88
PHGDH-230ENST00000641927 CD2BP2O95400 341 aaKnown RBP20.55■□□□□ 0.88
PHGDH-230ENST00000641927 ABCB5Q2M3G0 1257 aa20.55■□□□□ 0.88
PHGDH-230ENST00000641927 BRF1Q92994 677 aa20.55■□□□□ 0.88
PHGDH-230ENST00000641927 ZNF341Q9BYN7 854 aa20.55■□□□□ 0.88
PHGDH-230ENST00000641927 GPHNQ9NQX3 736 aaPredicted RBP20.55■□□□□ 0.88
PHGDH-230ENST00000641927 FZD1Q9UP38 647 aa20.55■□□□□ 0.88
PHGDH-230ENST00000641927 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 ANKRD1Q15327 319 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 NEDD1Q8NHV4 660 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 ANGEL1Q9UNK9 670 aaKnown RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 WTAPQ15007 396 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 HSCBQ8IWL3 235 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 IGDCC4Q8TDY8 1250 aa20.54■□□□□ 0.88
PHGDH-230ENST00000641927 NAP1L2Q9ULW6 460 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-230ENST00000641927 SSC5DA1L4H1 1573 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 TRAF5O00463 557 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 GH2P01242 217 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 ENAHQ8N8S7 591 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-230ENST00000641927 WRNIP1Q96S55 665 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 ALDH8A1Q9H2A2 487 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-230ENST00000641927 ZNF408Q9H9D4 720 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
PHGDH-230ENST00000641927 PPP1R12BO60237 982 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-230ENST00000641927 YY1P25490 414 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 TTLL12Q14166 644 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-230ENST00000641927 RAB3GAP1Q15042 981 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 CCDC178Q5BJE1 867 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 IFIT1BQ5T764 474 aaKnown RBP20.52■□□□□ 0.88
PHGDH-230ENST00000641927 TMEM179Q6ZVK1 233 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 CEP95Q96GE4 821 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 LY9Q9HBG7 655 aa20.52■□□□□ 0.88
PHGDH-230ENST00000641927 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 PHF20L1A8MW92 1017 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 CAP2P40123 477 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 MCM2P49736 904 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 CHADLQ6NUI6 762 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 SNX21Q969T3 373 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 MTA3Q9BTC8 594 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
PHGDH-230ENST00000641927 SENP2Q9HC62 589 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 JAG1P78504 1218 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 BECN1Q14457 450 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 SEPT2Q15019 361 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 SEC23AQ15436 765 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 ZBTB21Q9ULJ3 1066 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
PHGDH-230ENST00000641927 PLIN4Q96Q06 1357 aa20.5■□□□□ 0.87
PHGDH-230ENST00000641927 INPP5BP32019 993 aa20.5■□□□□ 0.87
PHGDH-230ENST00000641927 LIFRP42702 1097 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms