RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	RBM43	Q6ZSC3	357 aa	Known RBP	13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	ZNF654	Q8IZM8	581 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	FAM43A	Q8N2R8	423 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	JDP2	Q8WYK2	163 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	ANP32B	Q92688	251 aa	Known RBP	13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	PHKB	Q93100	1093 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	PDLIM2	Q96JY6	352 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	AIFM3	Q96NN9	605 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	UBAC1	Q9BSL1	405 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	NUP62CL	Q9H1M0	184 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	GJB4	Q9NTQ9	266 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	DACT1	Q9NYF0	836 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	MKRN1	Q9UHC7	482 aa	Known RBP	13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	YEATS4	O95619	227 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	LDHC	P07864	332 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	CYP2D6	P10635	497 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	CEBPZ	Q03701	1054 aa	Known RBP	13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	PPP2R5B	Q15173	497 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	MYSM1	Q5VVJ2	828 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	NBPF11	Q86T75	865 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	RNF214	Q8ND24	703 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	TBC1D16	Q8TBP0	767 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	BICD2	Q8TD16	824 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	VPS33B	Q9H267	617 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	POLL	Q9UGP5	575 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	TNKS	O95271	1327 aa		13.07	□□□□□ -0.32
GFAP-238	ENST00000640859	MYH6	P13533	1939 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	CCDC196	A0A1B0GTZ2	297 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	C6orf229	H3BNL8	230 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	LMNB1	P20700	586 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	EVX2	Q03828	476 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	MAP3K11	Q16584	847 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	CCAR1	Q8IX12	1150 aa	Known RBP	13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	ENAH	Q8N8S7	591 aa	Predicted RBP	13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	FANCB	Q8NB91	859 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	LINC00301	Q8NCQ3	95 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	WASF1	Q92558	559 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	PSMD1	Q99460	953 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	SLC26A6	Q9BXS9	759 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	POLR3E	Q9NVU0	708 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	CLIC4	Q9Y696	253 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	FAM205A	Q6ZU69	1335 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859	LTBP3	Q9NS15	1303 aa		13.06	□□□□□ -0.32
GFAP-238	ENST00000640859		A0A1W2PQ27	194 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859		A0A1W2PQ64	194 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859		A0A1W2PQD8	194 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	NR1I2	O75469	434 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	PRDM1	O75626	825 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	POLR3D	P05423	398 aa	Predicted RBP	13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	SLC3A2	P08195	630 aa	Known RBP	13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	U2AF2	P26368	475 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	NT5C2	P49902	561 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	C12orf60	Q5U649	245 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	ENGASE	Q8NFI3	743 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	C7orf43	Q8WVR3	580 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	TNMD	Q9H2S6	317 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	GOLPH3L	Q9H4A5	285 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	PCDHA7	Q9UN72	937 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	CDK5RAP2	Q96SN8	1893 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	MROH7-TTC4	A0A0A0MT08	1334 aa		13.05	□□□□□ -0.32
GFAP-238	ENST00000640859	NAV1	Q8NEY1	1877 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	UBE2Q2L	H0YL09	131 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	BAG3	O95817	575 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	USP17L8	P0C7I0	530 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	CCDC192	P0DO97	292 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	GUCY1A2	P33402	732 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	STK38	Q15208	465 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	DIXDC1	Q155Q3	683 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	ANO1	Q5XXA6	986 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	ADAL	Q6DHV7	355 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	IQCA1	Q86XH1	822 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	LARGE2	Q8N3Y3	721 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	KCNG4	Q8TDN1	519 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	FAM163A	Q96GL9	167 aa	Predicted RBP	13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	RNF181	Q9P0P0	153 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	ROBO3	Q96MS0	1386 aa		13.04	□□□□□ -0.32
GFAP-238	ENST00000640859	GPR75-ASB3	A0A0A6YYF3	556 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	SPTLC2	O15270	562 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	PPIP5K2	O43314	1243 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	DDAH1	O94760	285 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	DEXI	O95424	95 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	CALM1	P0DP23	149 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	CALM2	P0DP24	149 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	CALM3	P0DP25	149 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	USP5	P45974	858 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	PDE4B	Q07343	736 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	FUT2	Q10981	343 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	SNW1	Q13573	536 aa	Known RBP	13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	TRIM29	Q14134	588 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	CAMK4	Q16566	473 aa		13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	IFIT1B	Q5T764	474 aa	Known RBP	13.03	□□□□□ -0.32
GFAP-238	ENST00000640859	DPY19L2	Q6NUT2	758 aa		13.03	□□□□□ -0.32

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