RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 BMP2KQ9NSY1 1161 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CLIC4Q9Y696 253 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 POLR3GO15318 223 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 KIAA0754O94854 1291 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 NLRP5P59047 1200 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PARP10Q53GL7 1025 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 ZNF579Q8NAF0 562 aaKnown RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TIAM2Q8IVF5 1701 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PATL2C9JE40 543 aaKnown RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 BAG3O95817 575 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 AFMP43652 599 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 VPS36Q86VN1 386 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 SLF2Q8IX21 1173 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TSG101Q99816 390 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 MTA3Q9BTC8 594 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 GOLPH3LQ9H4A5 285 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PPP2R2CQ9Y2T4 447 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 ATRNO75882 1429 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 A6NNZ2 444 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 FMNL1O95466 1100 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 NT5C2P49902 561 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TUBB8Q3ZCM7 444 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 EPHA10Q5JZY3 1008 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CALML4Q96GE6 196 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 NAPGQ99747 312 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CARD10Q9BWT7 1032 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 KAT14Q9H8E8 782 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CDHR2Q9BYE9 1310 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 WWC2Q6AWC2 1192 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 LZTS2Q9BRK4 669 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PLA2G12BQ9BX93 195 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 RNF26Q9BY78 433 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TRAPPC10P48553 1259 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 LMAN1P49257 510 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 RRAGBQ5VZM2 374 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ELOA2Q8IYF1 753 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 PANX2Q96RD6 677 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 LUC7L2Q9Y383 392 aaKnown RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 MMP1P03956 469 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 MYL1P05976 194 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ERCC6LQ2NKX8 1250 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 LZTFL1Q9NQ48 299 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 RXRAP19793 462 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 CTNND2Q9UQB3 1225 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 SHTN1A0MZ66 631 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ERLIN2O94905 339 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ZAP70P43403 619 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 PAK1Q13153 545 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ZNF512BQ96KM6 892 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 GSDMAQ96QA5 445 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 WWC3Q9ULE0 1092 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 TMEM94Q12767 1356 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 CYP7A1P22680 504 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 PDIA6Q15084 440 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC96Q2M329 555 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 FBXO38Q6PIJ6 1188 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 DZIP3Q86Y13 1208 aaKnown RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 DIS3L2Q8IYB7 885 aaKnown RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 DHX58Q96C10 678 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 SMCHD1A6NHR9 2005 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC151A5D8V7 595 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 H7C1W4 665 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 PPP1R12BO60237 982 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 PDE8BO95263 885 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ADD2P35612 726 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 MCM6Q14566 821 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 NYAP1Q6ZVC0 841 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 H0YHG0 523 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 ADORA1P30542 326 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 STK11IPQ8N1F8 1099 aa6.28□□□□□ -1.4
SCN3A-210ENST00000640652 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
SCN3A-210ENST00000640652 WDHD1O75717 1129 aaPredicted RBP6.27□□□□□ -1.4
SCN3A-210ENST00000640652 DDAH1O94760 285 aa6.27□□□□□ -1.4
SCN3A-210ENST00000640652 GNA11P29992 359 aa6.27□□□□□ -1.4
SCN3A-210ENST00000640652 LRRC24Q50LG9 513 aa6.27□□□□□ -1.4
SCN3A-210ENST00000640652 HSP90AA4PQ58FG1 418 aa6.27□□□□□ -1.4
SCN3A-210ENST00000640652 SGMS1Q86VZ5 419 aa6.27□□□□□ -1.4
SCN3A-210ENST00000640652 MB21D2Q8IYB1 491 aaPredicted RBP6.27□□□□□ -1.4
SCN3A-210ENST00000640652 MORC2Q9Y6X9 1032 aaPredicted RBP6.27□□□□□ -1.4
SCN3A-210ENST00000640652 TSPY2A6NKD2 308 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 EXOC5O00471 708 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 HMGB2P26583 209 aaKnown RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ZSCAN10Q96SZ4 725 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 MKNK2Q9HBH9 465 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms