RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 SHMT1P34896 483 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 GJA5P36382 358 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 HAND2P61296 217 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 MAP3K10Q02779 954 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 GABPAQ06546 454 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 DCAF15Q66K64 600 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 ARMC9Q7Z3E5 817 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 NKX2-3Q8TAU0 364 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 ESYT1Q9BSJ8 1104 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 NAPBQ9H115 298 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
SCARB2-222ENST00000640634 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 FAM155AB1AL88 458 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-222ENST00000640634 AOC2O75106 756 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 PRDM1O75626 825 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
SCARB2-222ENST00000640634 FKBP1BP68106 108 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 METTL16Q86W50 562 aaKnown RBP13.06□□□□□ -0.32
SCARB2-222ENST00000640634 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-222ENST00000640634 ZNF112Q9UJU3 913 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
SCARB2-222ENST00000640634 VEGFBP49765 207 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-222ENST00000640634 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 DEFB115Q30KQ5 88 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 RGMBQ6NW40 437 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 EHD4Q9H223 541 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 RAD50Q92878 1312 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 TBC1D12O60347 775 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 PPARAQ07869 468 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 SBK1Q52WX2 424 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 GIMAP6Q6P9H5 292 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 TBC1D10CQ8IV04 446 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
SCARB2-222ENST00000640634 HERC5Q9UII4 1024 aaKnown RBP13.05□□□□□ -0.32
SCARB2-222ENST00000640634 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 CDK8P49336 464 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 DGKZQ13574 1117 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-222ENST00000640634 HOOK2Q96ED9 719 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
SCARB2-222ENST00000640634 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
SCARB2-222ENST00000640634 MYH8P13535 1937 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 A6NJR5 290 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 SLC10A3P09131 477 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 AKR1B1P15121 316 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 CAP2P40123 477 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 SCYL3Q8IZE3 742 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 CSADQ9Y600 493 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 PHIPQ8WWQ0 1821 aa13.03□□□□□ -0.32
SCARB2-222ENST00000640634 STK25O00506 426 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 GH2P01242 217 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 ALX1Q15699 326 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 SLC10A4Q96EP9 437 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 WNK4Q96J92 1243 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.32
SCARB2-222ENST00000640634 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-222ENST00000640634 SPDYE5A6NIY4 337 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 RASA1P20936 1047 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 GUCY1A2P33402 732 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-222ENST00000640634 NOL9Q5SY16 702 aaKnown RBP13.02□□□□□ -0.33
SCARB2-222ENST00000640634 SPRYD7Q5W111 196 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 AMOTL1Q8IY63 956 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-222ENST00000640634 ZMYM6O95789 1325 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 NEDD4P46934 1319 aa13.02□□□□□ -0.33
SCARB2-222ENST00000640634 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
SCARB2-222ENST00000640634 THSD7BQ9C0I4 1608 aa13.01□□□□□ -0.33
SCARB2-222ENST00000640634 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 IRF6O14896 467 aa13.01□□□□□ -0.33
SCARB2-222ENST00000640634 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 PTPRAP18433 802 aa13.01□□□□□ -0.33
SCARB2-222ENST00000640634 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 HHIPL1Q96JK4 782 aa13.01□□□□□ -0.33
SCARB2-222ENST00000640634 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
SCARB2-222ENST00000640634 ZHX2Q9Y6X8 837 aa13.01□□□□□ -0.33
SCARB2-222ENST00000640634 CYP21A2P08686 494 aa13□□□□□ -0.33
SCARB2-222ENST00000640634 SEPT2Q15019 361 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms