RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 FAM9CQ8IZT9 166 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 TCP11Q8WWU5 503 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 YIPF3Q9GZM5 350 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 BTBD11A6QL63 1104 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 KCNB1Q14721 858 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ACAP1Q15027 740 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 CFAP70Q5T0N1 1121 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ISM2Q6H9L7 571 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 DSTYKQ6XUX3 929 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 FAM81AQ8TBF8 368 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 JAKMIP2Q96AA8 810 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 CEP295NLQ96MC4 621 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 SOGA1O94964 1423 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 F8W031 263 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 KIF3BO15066 747 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 FAPQ12884 760 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 INO80DQ53TQ3 878 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC122Q5T0U0 273 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC183Q5T5S1 534 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 PDXDC2PQ6P474 469 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 RNF25Q96BH1 459 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 OSBPL5Q9H0X9 879 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 QPCTLQ9NXS2 382 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ELP1O95163 1332 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 KIAA1107Q9UPP5 1409 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 SYNJ1O43426 1573 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 NLRP1Q9C000 1473 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 GOLGA6L4A6NEF3 574 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 TNFRSF10BO14763 440 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 PHACTR2O75167 634 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 KATNA1O75449 491 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 TNNI2P48788 182 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 COPAP53621 1224 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ACTN3Q08043 901 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ARHGAP22Q7Z5H3 698 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ANKK1Q8NFD2 765 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 BRD8Q9H0E9 1235 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 NSFL1CQ9UNZ2 370 aaKnown RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ATF5Q9Y2D1 282 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-222ENST00000640072 CARD8Q9Y2G2 431 aa6.88□□□□□ -1.31
NECAP1-222ENST00000640072 ANKRD36BQ8N2N9 1353 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 TBC1D12O60347 775 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PRMT3O60678 531 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 FERP16591 822 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 MXI1P50539 228 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 AP2B1P63010 937 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 MRPS35P82673 323 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PAK2Q13177 524 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 THEMIS2Q5TEJ8 643 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 KAT2BQ92831 832 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 SKA1Q96BD8 255 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 C1orf74Q96LT6 269 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PCMTD1Q96MG8 357 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 HAUS7Q99871 368 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 HOMER3Q9NSC5 361 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 BHMG1C9JSJ3 638 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 NDUFB5O43674 189 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 ST18O60284 1047 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 RTN3O95197 1032 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 SLC4A2P04920 1241 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 SKIV2L2P42285 1042 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PAPOLAP51003 745 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 MRPL12P52815 198 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 CBLBQ13191 982 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 SNW1Q13573 536 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PPP1R18Q6NYC8 613 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 ZKSCAN4Q969J2 545 aaPredicted RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 TTC14Q96N46 770 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 OSBPL9Q96SU4 736 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 THUMPD2Q9BTF0 503 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 NSRP1Q9H0G5 558 aaKnown RBP6.87□□□□□ -1.31
NECAP1-222ENST00000640072 FAM169AQ9Y6X4 670 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 NCOA1Q15788 1441 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 EVC2Q86UK5 1308 aa6.87□□□□□ -1.31
NECAP1-222ENST00000640072 XPOTO43592 962 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 KLHL41O60662 606 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 HSPA1LP34931 641 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 TUBA1BP68363 451 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ARMC4Q5T2S8 1044 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 TUBA1AQ71U36 451 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 TMEM151BQ8IW70 566 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 MSANTD4Q8NCY6 345 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms