RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TTC12Q9H892 705 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PAPOLBQ9NRJ5 636 aaKnown RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 SART1O43290 800 aaKnown RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PLA2G4AP47712 749 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 AMPD3Q01432 767 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 APPL2Q8NEU8 664 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 SKA1Q96BD8 255 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 CORO1BQ9BR76 489 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TBC1D2Q9BYX2 928 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 IRX2Q9BZI1 471 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TRIM5Q9C035 493 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 BRINP2Q9C0B6 783 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 IL20Q9NYY1 176 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 NCKAP5LQ9HCH0 1330 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ENO4A6NNW6 628 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 S100A1P23297 94 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 UBASH3AP57075 661 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PPP2R5CQ13362 524 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GPT2Q8TD30 523 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 M0R2C6 588 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 CETN1Q12798 172 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 BBS9Q3SYG4 887 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TRIM68Q6AZZ1 485 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 AP1M1Q9BXS5 423 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PICK1Q9NRD5 415 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PSD3Q9NYI0 1048 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SLAIN2Q9P270 581 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 HOOK1Q9UJC3 728 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ELP1O95163 1332 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PDE3BQ13370 1112 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SEPT6Q14141 434 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SPDYCQ5MJ68 293 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 VRTNQ9H8Y1 702 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 FANCFQ9NPI8 374 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 RSF1Q96T23 1441 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TSPY2A6NKD2 308 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 M0QX08 132 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 BIN1O00499 593 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TSPY3P0CV98 308 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TSPY8P0CW00 308 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 MARSP56192 900 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TSPY1Q01534 308 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TSHZ3Q63HK5 1081 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SYCP3Q8IZU3 236 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 CDKL2Q92772 493 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SPZ1Q9BXG8 430 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 NUF2Q9BZD4 464 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 FAM129AQ9BZQ8 928 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 FAM184BQ9ULE4 1060 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 KPNA6O60684 536 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 IDO1P14902 403 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 RPL13P26373 211 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 GUCY1B3Q02153 619 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 WASHC4Q2M389 1173 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TAOK1Q7L7X3 1001 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 RASGRP2Q7LDG7 609 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 UROC1Q96N76 676 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SLX1AQ9BQ83 275 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SH3GLB2Q9NR46 395 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 MAP3K5Q99683 1374 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC171Q6TFL3 1326 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 EBAG9O00559 213 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 FGAP02671 866 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 KRT4P19013 534 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 GRK2P25098 689 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 KIF22Q14807 665 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 STK38Q15208 465 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PKN1Q16512 942 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TEX9Q8N6V9 391 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 IPCEF1Q8WWN9 437 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 AASDHPPTQ9NRN7 309 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 C2CD2Q9Y426 696 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SLC4A4Q9Y6R1 1079 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 MYH7P12883 1935 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC144AA2RUR9 1427 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 POTEFA5A3E0 1075 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TTC34A8MYJ7 566 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SERPINC1P01008 464 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PSMA3P25788 255 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 PSMC4P43686 418 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 GCLCP48506 637 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 EIF4G2P78344 907 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TTC39AQ5SRH9 613 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF75CPQ92670 426 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 AATFQ9NY61 560 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 NOSIPQ9Y314 301 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ATP6V1DQ9Y5K8 247 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SPTLC2O15270 562 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TEX28O15482 410 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TACC1O75410 805 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 ADD2P35612 726 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 GNL2Q13823 731 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 LBRQ14739 615 aaKnown RBP4.8□□□□□ -1.64
SCN3A-209ENST00000639244 TMEM57Q8N5G2 664 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 MTMR9Q96QG7 549 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 GORASP1Q9BQQ3 440 aa4.8□□□□□ -1.64
SCN3A-209ENST00000639244 SPTLC3Q9NUV7 552 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms