RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 LEMD3Q9Y2U8 911 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 MROH7-TTC4A0A0A0MT08 1334 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 USP17L21D6R901 530 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 NRDCO43847 1150 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 TM4SF1P30408 202 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 GUCY1A2P33402 732 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 DPCR1Q3MIW9 517 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 TAOK2Q9UL54 1235 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 BTAF1O14981 1849 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
CLN8-212ENST00000637083 SOCS7O14512 581 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 PTPREP23469 700 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 KRT2P35908 639 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 GSTO1P78417 241 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
CLN8-212ENST00000637083 KRBA2Q6ZNG9 492 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 CERS3Q8IU89 383 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 LRRC8AQ8IWT6 810 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
CLN8-212ENST00000637083 NRBP1Q9UHY1 535 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 DACH1Q9UI36 760 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 KCNJ14Q9UNX9 436 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 MAST2Q6P0Q8 1798 aa13.93□□□□□ -0.18
CLN8-212ENST00000637083 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
CLN8-212ENST00000637083 ONECUT3O60422 494 aaPredicted RBP13.92□□□□□ -0.18
CLN8-212ENST00000637083 ADRA2BP18089 450 aa13.92□□□□□ -0.18
CLN8-212ENST00000637083 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
CLN8-212ENST00000637083 CCDC82Q8N4S0 544 aa13.92□□□□□ -0.18
CLN8-212ENST00000637083 ERCC4Q92889 916 aaPredicted RBP13.92□□□□□ -0.18
CLN8-212ENST00000637083 DCP1AQ9NPI6 582 aaPredicted RBP13.92□□□□□ -0.18
CLN8-212ENST00000637083 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLN8-212ENST00000637083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLN8-212ENST00000637083 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
CLN8-212ENST00000637083 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
CLN8-212ENST00000637083 KLRK1P26718 216 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 GRAPQ13588 217 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 BIN1O00499 593 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 BAG3O95817 575 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 LDHCP07864 332 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLN8-212ENST00000637083 TOB1P50616 345 aaPredicted RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 TROAPQ12815 778 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 MEX3CQ5U5Q3 659 aaKnown RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 ZNF384Q8TF68 577 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 CACTINQ8WUQ7 758 aaKnown RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 CLIC6Q96NY7 704 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 PHF20Q9BVI0 1012 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 FBXO2Q9UK22 296 aaPredicted RBP13.91□□□□□ -0.18
CLN8-212ENST00000637083 MYH13Q9UKX3 1938 aa13.91□□□□□ -0.18
CLN8-212ENST00000637083 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 KIF5BP33176 963 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 MYL5Q02045 173 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 CCDC144BQ3MJ40 725 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 TMTC3Q6ZXV5 915 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 ZNF804AQ7Z570 1209 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
CLN8-212ENST00000637083 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 XDHP47989 1333 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 SMC2O95347 1197 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
CLN8-212ENST00000637083 HSPA1LP34931 641 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 LRMPQ12912 555 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
CLN8-212ENST00000637083 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
CLN8-212ENST00000637083 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 TAF1P21675 1872 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 TSPY2A6NKD2 308 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 UBE2Q2LH0YL09 131 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 PRDM1O75626 825 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 PRDX5P30044 214 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 FUT2Q10981 343 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 PKN1Q16512 942 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
CLN8-212ENST00000637083 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 SEPT12Q8IYM1 358 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
CLN8-212ENST00000637083 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
CLN8-212ENST00000637083 LY75O60449 1722 aa13.89□□□□□ -0.19
CLN8-212ENST00000637083 AFF2P51816 1311 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms