RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 FAM107BQ9H098 131 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 SLC52A2Q9HAB3 445 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 RGS17Q9UGC6 210 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 SIPA1L3O60292 1781 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 GUCY2CP25092 1073 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 CPLX3Q8WVH0 158 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 SERTAD1Q9UHV2 236 aa17.67■□□□□ 0.42
CACNA1A-235ENST00000637004 SLIT3O75094 1523 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 PTPREP23469 700 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 SLC9C2Q5TAH2 1124 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 SPATA1Q5VX52 437 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 TEX33O43247 280 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 PRR29P0C7W0 189 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 AARSP49588 968 aaKnown RBP eCLIP17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 SPECC1Q5M775 1068 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 TMTC1Q8IUR5 882 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 ZNF579Q8NAF0 562 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 CCDC148Q8NFR7 591 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 PHKBQ93100 1093 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 MED15Q96RN5 788 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 DEF6Q9H4E7 631 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 WWC3Q9ULE0 1092 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
CACNA1A-235ENST00000637004 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 PBX1P40424 430 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 SAFBQ15424 915 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 LRRIQ3A6PVS8 624 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 H7C1W4 665 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 RNF40O75150 1001 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 CIAO1O76071 339 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 FECHP22830 423 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
CACNA1A-235ENST00000637004 SH2B2O14492 632 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 SEMA3EO15041 775 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 CPP00450 1065 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 APTXQ7Z2E3 356 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 SPATA20Q8TB22 786 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 WASF1Q92558 559 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 MYO6Q9UM54 1294 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 A0A0U1RQJ8 604 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 ZBTB43O43298 467 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 ATRIPQ8WXE1 791 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 CEP126Q9P2H0 1117 aa17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-235ENST00000637004 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 RILPL1Q5EBL4 403 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 ITIH6Q6UXX5 1313 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 CASP14P31944 242 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 FAM182BQ5T319 152 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 TMEM87BQ96K49 555 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
CACNA1A-235ENST00000637004 A0A087WUV0 522 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 GPAA1O43292 621 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 LRRC24Q50LG9 513 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 NOA1Q8NC60 698 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 NWD2Q9ULI1 1742 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 GOLGA8AA7E2F4 631 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 RXRAP19793 462 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 SSRP1Q08945 709 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 NTRK3Q16288 839 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 PUS7LQ9H0K6 701 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 CEP131Q9UPN4 1083 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 UBN2Q6ZU65 1347 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 ACTN4O43707 911 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 CDKAL1Q5VV42 579 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 NFXL1Q6ZNB6 911 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 TADA2BQ86TJ2 420 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 SUGP1Q8IWZ8 645 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 ACRBPQ8NEB7 543 aa17.62■□□□□ 0.41
CACNA1A-235ENST00000637004 C5P01031 1676 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 AMPD2Q01433 879 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 CYP26C1Q6V0L0 522 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 GRAMD1CQ8IYS0 662 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 ZBTB9Q96C00 473 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms