RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
CLN6-217ENST00000636964 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
CLN6-217ENST00000636964 TGFBRAP1Q8WUH2 860 aa13.32□□□□□ -0.28
CLN6-217ENST00000636964 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 IL1R1P14778 569 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 NPR1P16066 1061 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 LIG1P18858 919 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 NTRK3Q16288 839 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 FBXO18Q8NFZ0 1043 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 EGFL6Q8IUX8 553 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 ANKRD31Q8N7Z5 1873 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 PDE6BP35913 854 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 DYNLL2Q96FJ2 89 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 MXD3Q9BW11 206 aa13.31□□□□□ -0.28
CLN6-217ENST00000636964 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
CLN6-217ENST00000636964 CCDC88AQ3V6T2 1871 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 CAMK4Q16566 473 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 MAPKAPK5Q8IW41 473 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
CLN6-217ENST00000636964 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
CLN6-217ENST00000636964 ZC3H12CQ9C0D7 883 aaKnown RBP13.3□□□□□ -0.28
CLN6-217ENST00000636964 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 GUCY1A2P33402 732 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 RTN1Q16799 776 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 NOL10Q9BSC4 688 aaKnown RBP13.3□□□□□ -0.28
CLN6-217ENST00000636964 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
CLN6-217ENST00000636964 CDKL5O76039 1030 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 CHRNA5P30532 468 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 BTDP43251 543 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 SEC23AQ15436 765 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 SLC15A2Q16348 729 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
CLN6-217ENST00000636964 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 BAG3O95817 575 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 GSTO1P78417 241 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 BICD2Q8TD16 824 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 ELP1O95163 1332 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
CLN6-217ENST00000636964 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
CLN6-217ENST00000636964 IFIT1BQ5T764 474 aaKnown RBP13.29□□□□□ -0.28
CLN6-217ENST00000636964 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
CLN6-217ENST00000636964 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CLN6-217ENST00000636964 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 LDHCP07864 332 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
CLN6-217ENST00000636964 NAA30Q147X3 362 aaPredicted RBP13.28□□□□□ -0.28
CLN6-217ENST00000636964 KRT40Q6A162 431 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 TMTC2Q8N394 836 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 CAMKK2Q96RR4 588 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
CLN6-217ENST00000636964 G3V3G9 751 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 SLC44A5Q8NCS7 719 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 SLFN14P0C7P3 912 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 PLCD1P51178 756 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
CLN6-217ENST00000636964 KCNQ5Q9NR82 932 aa13.28□□□□□ -0.28
CLN6-217ENST00000636964 MKRN1Q9UHC7 482 aaKnown RBP13.28□□□□□ -0.28
CLN6-217ENST00000636964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.287e-6■■■■■ 33.6
CLN6-217ENST00000636964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.28
CLN6-217ENST00000636964 TMC4Q7Z404 712 aa13.27□□□□□ -0.28
CLN6-217ENST00000636964 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.28
CLN6-217ENST00000636964 CLIC4Q9Y696 253 aa13.27□□□□□ -0.28
CLN6-217ENST00000636964 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
CLN6-217ENST00000636964 FGRP09769 529 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 KIF23Q02241 960 aaPredicted RBP13.27□□□□□ -0.29
CLN6-217ENST00000636964 PDE4BQ07343 736 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 SBK1Q52WX2 424 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 C12orf60Q5U649 245 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 STK32BQ9NY57 414 aa13.27□□□□□ -0.29
CLN6-217ENST00000636964 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
CLN6-217ENST00000636964 H0YIN7 160 aa13.26□□□□□ -0.29
CLN6-217ENST00000636964 NR1I2O75469 434 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms