RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	GOLGA8B	A8MQT2	603 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	SRGAP2	O75044	1071 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	ABL1	P00519	1130 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	ZNF18	P17022	549 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	PEX19	P40855	299 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	MRPL12	P52815	198 aa	Known RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	POSTN	Q15063	836 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	TSR1	Q2NL82	804 aa	Known RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	KCTD16	Q68DU8	428 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CYP26C1	Q6V0L0	522 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CCNI2	Q6ZMN8	369 aa	Predicted RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CCDC13	Q8IYE1	715 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	ARMC2	Q8NEN0	867 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	ANKRD24	Q8TF21	1146 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CCDC51	Q96ER9	411 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CALR3	Q96L12	384 aa	Known RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	CTAGE1	Q96RT6	745 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	JADE2	Q9NQC1	790 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	IGSF5	Q9NSI5	407 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	HDAC6	Q9UBN7	1215 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	ARIH1	Q9Y4X5	557 aa	Predicted RBP	6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	NDUFB9	Q9Y6M9	179 aa		6.05	□□□□□ -1.44
RYR3-223	ENST00000636845	PREX1	Q8TCU6	1659 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	NEXMIF	Q5QGS0	1516 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	LMTK2	Q8IWU2	1503 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845		A0A1B0GTH6	734 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	FOXN1	O15353	648 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	IPO7	O95373	1038 aa	Known RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	SLC8A1	P32418	973 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	STX17	P56962	302 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KIF23	Q02241	960 aa	Predicted RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	GRIPAP1	Q4V328	841 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	SPECC1	Q5M775	1068 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	TTC39A	Q5SRH9	613 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	DDX46	Q7L014	1031 aa	Known RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KIRREL3	Q8IZU9	778 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	NOC3L	Q8WTT2	800 aa	Known RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	VCPKMT	Q9H867	229 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	SLC40A1	Q9NP59	571 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	MAN1B1	Q9UKM7	699 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	ATXN2	Q99700	1313 aa	Known RBP	6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KLF18	A0A0U1RQI7	1052 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KIF28P	B7ZC32	967 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845		E7EWF7	191 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	N4BP3	O15049	544 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	PPP6R2	O75170	966 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	MYBL2	P10244	700 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	BMP6	P22004	513 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	AMPD2	Q01433	879 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	TRIM29	Q14134	588 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	CCDC122	Q5T0U0	273 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	NAA35	Q5VZE5	725 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KIAA1328	Q86T90	577 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	PARP9	Q8IXQ6	854 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	JAKMIP2	Q96AA8	810 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	SH3GL2	Q99962	352 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	HPSE	Q9Y251	543 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	MAP3K2	Q9Y2U5	619 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	KAT6B	Q8WYB5	2073 aa		6.04	□□□□□ -1.44
RYR3-223	ENST00000636845	STK25	O00506	426 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	SKAP2	O75563	359 aa	Predicted RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	CHGB	P05060	677 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	LSP1	P33241	339 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	FXR1	P51114	621 aa	Known RBP eCLIP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	NAP1L1	P55209	391 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	EXOSC10	Q01780	885 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	PLCB4	Q15147	1175 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	CWF19L2	Q2TBE0	894 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	WLS	Q5T9L3	541 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	SLC9C2	Q5TAH2	1124 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	RESP18	Q5W5W9	173 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	TRAPPC11	Q7Z392	1133 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	YTHDF3	Q7Z739	585 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	VPS37D	Q86XT2	251 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	STK11IP	Q8N1F8	1099 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	EHBP1	Q8NDI1	1231 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	AIDA	Q96BJ3	306 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	SH3GL3	Q99963	347 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	NBPF3	Q9H094	633 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	HAUS4	Q9H6D7	363 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	POLD4	Q9HCU8	107 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	DDX20	Q9UHI6	824 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	STK24	Q9Y6E0	443 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	ZC3H4	Q9UPT8	1303 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	CHD2	O14647	1828 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	SBNO1	A3KN83	1393 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845		E7EVH7	732 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	PES1	O00541	588 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	MPHOSPH10	O00566	681 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	PPP1R12B	O60237	982 aa	Predicted RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	ATP2C2	O75185	946 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	ATP1A1	P05023	1023 aa	Known RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	PDHB	P11177	359 aa		6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	ERCC5	P28715	1186 aa	Predicted RBP	6.03	□□□□□ -1.44
RYR3-223	ENST00000636845	KRT9	P35527	623 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms