RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 USP17L3A6NCW0 530 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 USP17L4A6NCW7 530 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 DPEP1P16444 411 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 KIF23Q02241 960 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 TROAPQ12815 778 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 PICALMQ13492 652 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 USP17L1Q7RTZ2 530 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 CATIPQ7Z7H3 387 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
CACNA1A-231ENST00000636816 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 RCAN1P53805 252 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 DACT2Q5SW24 774 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 PANK2Q9BZ23 570 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 DDX4Q9NQI0 724 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 CFAP45Q9UL16 551 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 STK36Q9NRP7 1315 aa18.45■□□□□ 0.54
CACNA1A-231ENST00000636816 ZBTB7AO95365 584 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 LIG1P18858 919 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 RASA1P20936 1047 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 CDK8P49336 464 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 SLC16A10Q8TF71 515 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 MYH6P13533 1939 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 WDHD1O75717 1129 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 STRIP1Q5VSL9 837 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 APOBEC3HQ6NTF7 200 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 TTLL6Q8N841 843 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 RCOR1Q9UKL0 485 aa18.44■□□□□ 0.54
CACNA1A-231ENST00000636816 hCG_1642624A0A1W2PR95 340 aa18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 MRE11P49959 708 aa18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 FUT2Q10981 343 aa18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 ZNF396Q96N95 335 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 BAZ2BQ9UIF8 2168 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-231ENST00000636816 CRKP46108 304 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 HHIPL2Q6UWX4 724 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 TEKT1Q969V4 418 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 SYAP1Q96A49 352 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 KCNJ14Q9UNX9 436 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 CC2D2BQ6DHV5 1058 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 CLIC4Q9Y696 253 aa18.42■□□□□ 0.54
CACNA1A-231ENST00000636816 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 DDAH1O94760 285 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 CCDC183Q5T5S1 534 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 MYSM1Q5VVJ2 828 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 GOLGA6L4A6NEF3 574 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 DEXIO95424 95 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 CALM1P0DP23 149 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 CALM2P0DP24 149 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 CALM3P0DP25 149 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 BRAPQ7Z569 592 aa18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-231ENST00000636816 NFIAQ12857 509 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 TRIM29Q14134 588 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 PKN1Q16512 942 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 ATL3Q6DD88 541 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 ZFPM1Q8IX07 1006 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 RGS22Q8NE09 1264 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 WASF1Q92558 559 aa18.4■□□□□ 0.54
CACNA1A-231ENST00000636816 SLURP2P0DP57 97 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 CACNB3P54284 484 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 FKBP1AP62942 108 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 TMTC3Q6ZXV5 915 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 SUPT20HQ8NEM7 779 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 ANKS1AQ92625 1134 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 ZDHHC15Q96MV8 337 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 RNF26Q9BY78 433 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 KAT14Q9H8E8 782 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 RBM28Q9NW13 759 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 RTEL1Q9NZ71 1219 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 PNMA1Q8ND90 353 aa18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-231ENST00000636816 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
CACNA1A-231ENST00000636816 BTBD18B2RXH4 712 aa18.38■□□□□ 0.53
CACNA1A-231ENST00000636816 PRPF3O43395 683 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-231ENST00000636816 MMP1P03956 469 aa18.38■□□□□ 0.53
CACNA1A-231ENST00000636816 U2AF2P26368 475 aaKnown RBP eCLIP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms