RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NAA16Q6N069 864 aaPredicted RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 CERS5Q8N5B7 392 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 ZC3H15Q8WU90 426 aaKnown RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 PIH1D3Q9NQM4 214 aaKnown RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 SNRKQ9NRH2 765 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 ADARB2Q9NS39 739 aaKnown RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 DIAPH3Q9NSV4 1193 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 TTF2Q9UNY4 1162 aaKnown RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 PPP2R3BQ9Y5P8 575 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 TCRBV5S4A2TA0A5A2 114 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 ZBTB24O43167 697 aaPredicted RBP8.07□□□□□ -1.12
UPF3B-205ENST00000636792 CRKP46108 304 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 GMPSP49915 693 aaPredicted RBP8.07□□□□□ -1.12
UPF3B-205ENST00000636792 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
UPF3B-205ENST00000636792 TNFAIP1Q13829 316 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 ZMYM1Q5SVZ6 1142 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 TSHZ3Q63HK5 1081 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 ANTXR1Q9H6X2 564 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 HACL1Q9UJ83 578 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 MYH8P13535 1937 aa8.07□□□□□ -1.12
UPF3B-205ENST00000636792 DLGAP5Q15398 846 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 KIF4BQ2VIQ3 1234 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 MCMDC2Q4G0Z9 681 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 APOBEC3FQ8IUX4 373 aaKnown RBP8.06□□□□□ -1.12
UPF3B-205ENST00000636792 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 MAGEB6Q8N7X4 407 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 AIDAQ96BJ3 306 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 ZBED3Q96IU2 234 aaPredicted RBP8.06□□□□□ -1.12
UPF3B-205ENST00000636792 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 MYOZ2Q9NPC6 264 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 TMOD2Q9NZR1 351 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 CNOT7Q9UIV1 285 aaKnown RBP8.06□□□□□ -1.12
UPF3B-205ENST00000636792 DAGLAQ9Y4D2 1042 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 GJA3Q9Y6H8 435 aa8.06□□□□□ -1.12
UPF3B-205ENST00000636792 CCDC171Q6TFL3 1326 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 ZNF532Q9HCE3 1301 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 REC8O95072 547 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 FMNL1O95466 1100 aaPredicted RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 VEGFAP15692 232 aaPredicted RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 CYP7A1P22680 504 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 CHMLP26374 656 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 BTDP43251 543 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 TNNI2P48788 182 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 CFAP100Q494V2 611 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 TBC1D9Q6ZT07 1266 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 ZNF384Q8TF68 577 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 HOOK2Q96ED9 719 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 EDC3Q96F86 508 aaKnown RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 DSCC1Q9BVC3 393 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 CRNKL1Q9BZJ0 848 aaKnown RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 BCL11AQ9H165 835 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 ATRNL1Q5VV63 1379 aa8.05□□□□□ -1.12
UPF3B-205ENST00000636792 BAZ2AQ9UIF9 1905 aaKnown RBP8.05□□□□□ -1.12
UPF3B-205ENST00000636792 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 WNT10BO00744 389 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 SGSM2O43147 1006 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 ENTPD3O75355 529 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 EPHX2P34913 555 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 MORN1Q5T089 497 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 RIOK1Q9BRS2 568 aaKnown RBP8.04□□□□□ -1.12
UPF3B-205ENST00000636792 NACAP1Q9BZK3 213 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 TAF1DQ9H5J8 278 aaPredicted RBP8.04□□□□□ -1.12
UPF3B-205ENST00000636792 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 ARPP21Q9UBL0 812 aaPredicted RBP8.04□□□□□ -1.12
UPF3B-205ENST00000636792 PGAP2Q9UHJ9 254 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
UPF3B-205ENST00000636792 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
UPF3B-205ENST00000636792 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
UPF3B-205ENST00000636792 ROBO3Q96MS0 1386 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 GPAA1O43292 621 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
UPF3B-205ENST00000636792 RHBDL3P58872 404 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 NMIQ13287 307 aaPredicted RBP8.03□□□□□ -1.12
UPF3B-205ENST00000636792 DIXDC1Q155Q3 683 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 ALX1Q15699 326 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 APOBEC3HQ6NTF7 200 aaKnown RBP8.03□□□□□ -1.12
UPF3B-205ENST00000636792 AMOTL1Q8IY63 956 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 OSBP2Q969R2 916 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 DHX36Q9H2U1 1008 aaKnown RBP8.03□□□□□ -1.12
UPF3B-205ENST00000636792 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
UPF3B-205ENST00000636792 PAPPA2Q9BXP8 1791 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 A0A0D9SFI3 127 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms