RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 ACRBPQ8NEB7 543 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 STK36Q9NRP7 1315 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 ABCC12Q96J65 1359 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 CHD4Q14839 1912 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 KIF5CO60282 957 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 AFMP43652 599 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 ABCB6Q9NP58 842 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 SYNRGQ9UMZ2 1314 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
THUMPD1-206ENST00000636554 FAM205CA6NFA0 338 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 MYO1CO00159 1063 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 PDE6AP16499 860 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 CASP14P31944 242 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 MFAP3LO75121 409 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 TRIML1Q8N9V2 468 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 GOLGA5Q8TBA6 731 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 C1orf167Q5SNV9 1468 aa17.06■□□□□ 0.32
THUMPD1-206ENST00000636554 IFNAR1P17181 557 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 PBX1P40424 430 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 VSNL1P62760 191 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 LRP6O75581 1613 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 GYPCP04921 128 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 PHKA1P46020 1223 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 MSANTD4Q8NCY6 345 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 TSPYL1Q9H0U9 437 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 PSD3Q9NYI0 1048 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 RAB21Q9UL25 225 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 FAN1Q9Y2M0 1017 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
THUMPD1-206ENST00000636554 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 ERCC5P28715 1186 aaPredicted RBP17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 CEP112Q8N8E3 955 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 HNRNPLLQ8WVV9 542 aaKnown RBP17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 GREM2Q9H772 168 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 CABP5Q9NP86 173 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 CDC25AP30304 524 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 ACTN2P35609 894 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 LIFRP42702 1097 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 USP5P45974 858 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 CUL4BQ13620 913 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 HDXQ7Z353 690 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 L1RE1Q9UN81 338 aa17.04■□□□□ 0.32
THUMPD1-206ENST00000636554 ITGA6P23229 1130 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 DPYDQ12882 1025 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 FOXR1Q6PIV2 292 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 CTAGE9A4FU28 777 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 PHACTR2O75167 634 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 ERVK-24P63145 666 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 RTN1Q16799 776 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 SRLQ86TD4 932 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 NOA1Q8NC60 698 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 NAA15Q9BXJ9 866 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 NAPBQ9H115 298 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 RASSF4Q9H2L5 321 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
THUMPD1-206ENST00000636554 MBD4O95243 580 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 CSF1RP07333 972 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 IFNL3Q8IZI9 196 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 WASF1Q92558 559 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 STAMQ92783 540 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 ARMT1Q9H993 441 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 CNNM1Q9NRU3 951 aa17.02■□□□□ 0.32
THUMPD1-206ENST00000636554 RNF225M0QZC1 329 aaPredicted RBP17.02■□□□□ 0.31
THUMPD1-206ENST00000636554 WNT7AO00755 349 aa17.02■□□□□ 0.31
THUMPD1-206ENST00000636554 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.31
THUMPD1-206ENST00000636554 EARS2Q5JPH6 523 aaKnown RBP17.02■□□□□ 0.31
THUMPD1-206ENST00000636554 TTLL11Q8NHH1 800 aa17.02■□□□□ 0.31
THUMPD1-206ENST00000636554 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms