RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 POTEEQ6S8J3 1075 aa22.6■■□□□ 1.21
CLN6-212ENST00000636020 USP38Q8NB14 1042 aa22.6■■□□□ 1.21
CLN6-212ENST00000636020 USP44Q9H0E7 712 aa22.6■■□□□ 1.21
CLN6-212ENST00000636020 CEP126Q9P2H0 1117 aa22.6■■□□□ 1.21
CLN6-212ENST00000636020 ATP11BQ9Y2G3 1177 aa22.6■■□□□ 1.21
CLN6-212ENST00000636020 TMEM265A0A087WTH1 108 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 MSCO60682 206 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 PLA2G5P39877 138 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 MFSD14CQ5VZR4 134 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 BADQ92934 168 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 EDC3Q96F86 508 aaKnown RBP22.59■■□□□ 1.21
CLN6-212ENST00000636020 FLRT1Q9NZU1 646 aa22.59■■□□□ 1.21
CLN6-212ENST00000636020 CCDC184Q52MB2 194 aa22.58■■□□□ 1.21
CLN6-212ENST00000636020 SPTY2D1Q68D10 685 aaPredicted RBP22.58■■□□□ 1.21
CLN6-212ENST00000636020 CCDC102BQ68D86 513 aa22.58■■□□□ 1.21
CLN6-212ENST00000636020 ZNF384Q8TF68 577 aa22.58■■□□□ 1.21
CLN6-212ENST00000636020 FBXO3Q9UK99 471 aa22.58■■□□□ 1.21
CLN6-212ENST00000636020 C19orf81C9J6K1 198 aa22.57■■□□□ 1.2
CLN6-212ENST00000636020 RASGRF1Q13972 1273 aa22.57■■□□□ 1.2
CLN6-212ENST00000636020 SLC39A5Q6ZMH5 540 aa22.57■■□□□ 1.2
CLN6-212ENST00000636020 GTF3C2Q8WUA4 911 aaPredicted RBP22.57■■□□□ 1.2
CLN6-212ENST00000636020 PAGR1Q9BTK6 254 aa22.57■■□□□ 1.2
CLN6-212ENST00000636020 HERC5Q9UII4 1024 aaKnown RBP22.57■■□□□ 1.2
CLN6-212ENST00000636020 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
CLN6-212ENST00000636020 PDS5AQ29RF7 1337 aaKnown RBP22.57■■□□□ 1.2
CLN6-212ENST00000636020 CIAO1O76071 339 aa22.56■■□□□ 1.2
CLN6-212ENST00000636020 MAP4K4O95819 1239 aaPredicted RBP22.56■■□□□ 1.2
CLN6-212ENST00000636020 CNGA1P29973 690 aa22.56■■□□□ 1.2
CLN6-212ENST00000636020 ADORA1P30542 326 aa22.56■■□□□ 1.2
CLN6-212ENST00000636020 MECOMQ03112 1051 aa22.56■■□□□ 1.2
CLN6-212ENST00000636020 SIL1Q9H173 461 aa22.56■■□□□ 1.2
CLN6-212ENST00000636020 RLFQ13129 1914 aa22.55■■□□□ 1.2
CLN6-212ENST00000636020 ASNSP08243 561 aa22.55■■□□□ 1.2
CLN6-212ENST00000636020 JAG1P78504 1218 aa22.55■■□□□ 1.2
CLN6-212ENST00000636020 PRDM5Q9NQX1 630 aaPredicted RBP22.55■■□□□ 1.2
CLN6-212ENST00000636020 NCOR1O75376 2440 aa22.55■■□□□ 1.2
CLN6-212ENST00000636020 USP17L10C9JJH3 530 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 GRIN2CQ14957 1233 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 GJC2Q5T442 439 aaPredicted RBP22.54■■□□□ 1.2
CLN6-212ENST00000636020 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 TRPV1Q8NER1 839 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 FAM122AQ96E09 287 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 PDLIM7Q9NR12 457 aa22.54■■□□□ 1.2
CLN6-212ENST00000636020 TRIM43BA6NCK2 446 aa22.53■■□□□ 1.2
CLN6-212ENST00000636020 GLRX3O76003 335 aaKnown RBP22.53■■□□□ 1.2
CLN6-212ENST00000636020 SNX17Q15036 470 aa22.53■■□□□ 1.2
CLN6-212ENST00000636020 SH3RF1Q7Z6J0 888 aa22.53■■□□□ 1.2
CLN6-212ENST00000636020 TRIM43Q96BQ3 446 aaPredicted RBP22.53■■□□□ 1.2
CLN6-212ENST00000636020 CWC22Q9HCG8 908 aaKnown RBP22.53■■□□□ 1.2
CLN6-212ENST00000636020 SLC15A5A6NIM6 579 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 IGHA2P01877 340 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 HOXC6P09630 235 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 PTPREP23469 700 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 ATP2B2Q01814 1243 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 TRIM60Q495X7 471 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 ARRDC4Q8NCT1 418 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 PI4KBQ9UBF8 816 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 RABGAP1Q9Y3P9 1069 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 NDUFB9Q9Y6M9 179 aa22.52■■□□□ 1.2
CLN6-212ENST00000636020 CNMDO75829 334 aa22.51■■□□□ 1.19
CLN6-212ENST00000636020 LDHCP07864 332 aa22.51■■□□□ 1.19
CLN6-212ENST00000636020 CYP2C19P33261 490 aa22.51■■□□□ 1.19
CLN6-212ENST00000636020 EMILIN3Q9NT22 766 aa22.51■■□□□ 1.19
CLN6-212ENST00000636020 IL15P40933 162 aaPredicted RBP22.5■■□□□ 1.19
CLN6-212ENST00000636020 CCNA1P78396 465 aa22.5■■□□□ 1.19
CLN6-212ENST00000636020 SHROOM1Q2M3G4 852 aaPredicted RBP22.5■■□□□ 1.19
CLN6-212ENST00000636020 NPLOC4Q8TAT6 608 aa22.5■■□□□ 1.19
CLN6-212ENST00000636020 NSUN4Q96CB9 384 aaKnown RBP22.5■■□□□ 1.19
CLN6-212ENST00000636020 RNPC3Q96LT9 517 aaKnown RBP22.5■■□□□ 1.19
CLN6-212ENST00000636020 KBTBD13C9JR72 458 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 CYBAP13498 195 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 EPHB4P54760 987 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 TIMM10P62072 90 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 GSTO1P78417 241 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 TEX11Q8IYF3 940 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 MRPL50Q8N5N7 158 aaKnown RBP22.49■■□□□ 1.19
CLN6-212ENST00000636020 ATXN2LQ8WWM7 1075 aaKnown RBP22.49■■□□□ 1.19
CLN6-212ENST00000636020 DNAJC18Q9H819 358 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 GINM1Q9NU53 330 aa22.49■■□□□ 1.19
CLN6-212ENST00000636020 HOXD11P31277 338 aaPredicted RBP22.48■■□□□ 1.19
CLN6-212ENST00000636020 GRB14Q14449 540 aa22.48■■□□□ 1.19
CLN6-212ENST00000636020 C1orf53Q5VUE5 145 aa22.48■■□□□ 1.19
CLN6-212ENST00000636020 METTL16Q86W50 562 aaKnown RBP22.48■■□□□ 1.19
CLN6-212ENST00000636020 DHX36Q9H2U1 1008 aaKnown RBP22.48■■□□□ 1.19
CLN6-212ENST00000636020 PTPRCP08575 1304 aa22.48■■□□□ 1.19
CLN6-212ENST00000636020 SIPA1L1O43166 1804 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 DNAJB2P25686 324 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 ITGB8P26012 769 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 MAP3K12Q12852 859 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 WDR78Q5VTH9 848 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 USP17L2Q6R6M4 530 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 ASB2Q96Q27 587 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 BDP1A6H8Y1 2624 aa22.47■■□□□ 1.19
CLN6-212ENST00000636020 ADCYAP1R1P41586 468 aa22.46■■□□□ 1.19
CLN6-212ENST00000636020 FOXP4Q8IVH2 680 aaPredicted RBP22.46■■□□□ 1.19
CLN6-212ENST00000636020 ZNF576Q9H609 170 aa22.46■■□□□ 1.19
CLN6-212ENST00000636020 ZBTB21Q9ULJ3 1066 aa22.46■■□□□ 1.19
CLN6-212ENST00000636020 PA2G4Q9UQ80 394 aaKnown RBP22.46■■□□□ 1.19
CLN6-212ENST00000636020 IVNS1ABPQ9Y6Y0 642 aa22.46■■□□□ 1.19
CLN6-212ENST00000636020 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms