RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 SALL3Q9BXA9 1300 aa8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 SYN1P17600 705 aa8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 HDLBPQ00341 1268 aaKnown RBP8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 E2F4Q16254 413 aa8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 NOL9Q5SY16 702 aaKnown RBP8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 PLEKHM2Q8IWE5 1019 aa8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 LRRCC1Q9C099 1032 aa8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 UPF2Q9HAU5 1272 aaKnown RBP8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 C9orf78Q9NZ63 289 aaPredicted RBP8.89□□□□□ -0.99
CHRNA7-208ENST00000635978 DNAH12Q6ZR08 3092 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 PNMA6EA0A0J9YXQ4 647 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 ANKRD18BA2A2Z9 1011 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 NBPF7P0C2Y1 421 aaPredicted RBP8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 FOXO4P98177 505 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 APOBEC3HQ6NTF7 200 aaKnown RBP8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 ERC1Q8IUD2 1116 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 ZDHHC15Q96MV8 337 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 ZNF341Q9BYN7 854 aa8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 UBE2OQ9C0C9 1292 aaKnown RBP8.88□□□□□ -0.99
CHRNA7-208ENST00000635978 PFASO15067 1338 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 RABL6Q3YEC7 729 aaPredicted RBP8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 VARS2Q5ST30 1063 aaKnown RBP8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 DCAF15Q66K64 600 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 MIGA2Q7L4E1 593 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 HOOK2Q96ED9 719 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 KIF1BPQ96EK5 621 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 FAM84BQ96KN1 310 aaPredicted RBP8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 TBC1D32Q96NH3 1257 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 MRIQ9BWK5 157 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 OGDHLQ9ULD0 1010 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 MGAMO43451 1857 aa8.87□□□□□ -0.99
CHRNA7-208ENST00000635978 ATRNL1Q5VV63 1379 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 A0A0G2JLL6 359 aaPredicted RBP8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 CXCL11O14625 94 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 TNPO2O14787 897 aaKnown RBP8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 SRGAP3O43295 1099 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 COL6A1P12109 1028 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 COL9A1P20849 921 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 HIBADHP31937 336 aaKnown RBP8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 GYG1P46976 350 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 TTC22Q5TAA0 569 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 PRRT2Q7Z6L0 340 aaPredicted RBP8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 KAZALD1Q96I82 304 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 NBPF3Q9H094 633 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 C11orf49Q9H6J7 331 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 SLC45A1Q9Y2W3 748 aa8.86□□□□□ -0.99
CHRNA7-208ENST00000635978 DDX60LQ5H9U9 1706 aaKnown RBP8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 EPB41L2O43491 1005 aaKnown RBP8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 CDC45O75419 566 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 PDE1AP54750 535 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 TRIM32Q13049 653 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 IFIT5Q13325 482 aaKnown RBP8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 UBE4AQ14139 1066 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 EPHA10Q5JZY3 1008 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 FBXO33Q7Z6M2 555 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 TEKT1Q969V4 418 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 COPRSQ9NQ92 184 aa8.85□□□□□ -0.99
CHRNA7-208ENST00000635978 PHF20L1A8MW92 1017 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 HMGCRP04035 888 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 GSPT1P15170 499 aaKnown RBP8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 RBM25P49756 843 aaKnown RBP8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 MAP3K21Q5TCX8 1036 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 TICAM2Q86XR7 235 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 MAFAQ8NHW3 353 aaPredicted RBP8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 RHPN1Q8TCX5 695 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 FAM151AQ8WW52 585 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 FAM161BQ96MY7 647 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 CDX2Q99626 313 aaPredicted RBP8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 GJD2Q9UKL4 321 aa8.84□□□□□ -0.99
CHRNA7-208ENST00000635978 TTC41PQ6P2S7 1318 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 SURF6O75683 361 aaKnown RBP8.83□□□□□ -1
CHRNA7-208ENST00000635978 MX1P20591 662 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 LRRC26Q2I0M4 334 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 CASC1Q6TDU7 716 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 HHIPL2Q6UWX4 724 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 LMBR1LQ6UX01 489 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 FASTKD5Q7L8L6 764 aaKnown RBP8.83□□□□□ -1
CHRNA7-208ENST00000635978 TBC1D22AQ8WUA7 517 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 SUCLG2Q96I99 432 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 BICC1Q9H694 974 aaKnown RBP8.83□□□□□ -1
CHRNA7-208ENST00000635978 GPHNQ9NQX3 736 aaPredicted RBP8.83□□□□□ -1
CHRNA7-208ENST00000635978 TMOD2Q9NZR1 351 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 RAPGEFL1Q9UHV5 662 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 AFG3L2Q9Y4W6 797 aa8.83□□□□□ -1
CHRNA7-208ENST00000635978 PTPRAP18433 802 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 PLA2G5P39877 138 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 MDM2Q00987 491 aaPredicted RBP8.82□□□□□ -1
CHRNA7-208ENST00000635978 NFIAQ12857 509 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 FAM110CQ1W6H9 321 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 SCYL3Q8IZE3 742 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
CHRNA7-208ENST00000635978 ANKRD13CQ8N6S4 541 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms