RNA–Protein interactions for RNA: ENST00000633951.1

LINC01002-235, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 4 BASIC

Gene LINC01002, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-235ENST00000633951 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01002-235ENST00000633951 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
LINC01002-235ENST00000633951 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
LINC01002-235ENST00000633951 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.29
LINC01002-235ENST00000633951 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
LINC01002-235ENST00000633951 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
LINC01002-235ENST00000633951 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
LINC01002-235ENST00000633951 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.3
LINC01002-235ENST00000633951 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
LINC01002-235ENST00000633951 SHMT1P34896 483 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 SOX10P56693 466 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 SHROOM1Q2M3G4 852 aaPredicted RBP13.2□□□□□ -0.3
LINC01002-235ENST00000633951 SLFNL1Q499Z3 407 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 CERKLQ49MI3 558 aaPredicted RBP13.2□□□□□ -0.3
LINC01002-235ENST00000633951 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 MCM9Q9NXL9 1143 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
LINC01002-235ENST00000633951 PRKAB2O43741 272 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 MBD4O95243 580 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 GDF11O95390 407 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 GH2P01242 217 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 CHGBP05060 677 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 OSBPP22059 807 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
LINC01002-235ENST00000633951 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 ZNF333Q96JL9 665 aa13.19□□□□□ -0.3
LINC01002-235ENST00000633951 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
LINC01002-235ENST00000633951 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
LINC01002-235ENST00000633951 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 ERC2O15083 957 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
LINC01002-235ENST00000633951 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
LINC01002-235ENST00000633951 FCGRTP55899 365 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 MTMR2Q13614 643 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 FAM110CQ1W6H9 321 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
LINC01002-235ENST00000633951 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
LINC01002-235ENST00000633951 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
LINC01002-235ENST00000633951 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
LINC01002-235ENST00000633951 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
LINC01002-235ENST00000633951 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
LINC01002-235ENST00000633951 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 STAP2Q9UGK3 403 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 PTPRFP10586 1907 aa13.17□□□□□ -0.3
LINC01002-235ENST00000633951 MYH1P12882 1939 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 USP17L21D6R901 530 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 USP14P54578 494 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 EVX2Q03828 476 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
LINC01002-235ENST00000633951 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 TSHZ3Q63HK5 1081 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
LINC01002-235ENST00000633951 APPBP2Q92624 585 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
LINC01002-235ENST00000633951 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 CYP2D6P10635 497 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 MX1P20591 662 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 IRF5Q13568 498 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 RAB3GAP1Q15042 981 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
LINC01002-235ENST00000633951 CENPFP49454 3210 aa13.15□□□□□ -0.31
LINC01002-235ENST00000633951 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.31
LINC01002-235ENST00000633951 MYPNQ86TC9 1320 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
LINC01002-235ENST00000633951 ATAD5Q96QE3 1844 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 GRK4P32298 578 aa13.14□□□□□ -0.31
LINC01002-235ENST00000633951 CDK8P49336 464 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms