RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 TRIM6-TRIM34B2RNG4 842 aa25.04■■□□□ 1.6
SF1-221ENST00000633899 GPAA1O43292 621 aa25.04■■□□□ 1.6
SF1-221ENST00000633899 SPP2Q13103 211 aa25.04■■□□□ 1.6
SF1-221ENST00000633899 CERKLQ49MI3 558 aaPredicted RBP25.04■■□□□ 1.6
SF1-221ENST00000633899 STRBPQ96SI9 672 aaKnown RBP25.04■■□□□ 1.6
SF1-221ENST00000633899 ZBTB21Q9ULJ3 1066 aa25.04■■□□□ 1.6
SF1-221ENST00000633899 PDHXO00330 501 aa25.03■■□□□ 1.6
SF1-221ENST00000633899 GNAT2P19087 354 aa25.03■■□□□ 1.6
SF1-221ENST00000633899 TATDN1Q6P1N9 297 aa25.03■■□□□ 1.6
SF1-221ENST00000633899 CABP5Q9NP86 173 aa25.03■■□□□ 1.6
SF1-221ENST00000633899 M0R2C6 588 aa25.02■■□□□ 1.6
SF1-221ENST00000633899 CYP2D6P10635 497 aa25.02■■□□□ 1.6
SF1-221ENST00000633899 CTU1Q7Z7A3 348 aaKnown RBP25.02■■□□□ 1.6
SF1-221ENST00000633899 ARPP21Q9UBL0 812 aaPredicted RBP25.02■■□□□ 1.6
SF1-221ENST00000633899 SWAP70Q9UH65 585 aa25.02■■□□□ 1.6
SF1-221ENST00000633899 USP17L12C9JPN9 530 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 USP17L21D6R901 530 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 GH2P01242 217 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 APPP05067 770 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 ABCB5Q2M3G0 1257 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 PLEKHM2Q8IWE5 1019 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 PARK7Q99497 189 aaKnown RBP25.01■■□□□ 1.59
SF1-221ENST00000633899 TAOK2Q9UL54 1235 aa25.01■■□□□ 1.59
SF1-221ENST00000633899 LOC285556D6RIA3 1793 aa25■■□□□ 1.59
SF1-221ENST00000633899 SHMT1P34896 483 aa25■■□□□ 1.59
SF1-221ENST00000633899 SP3Q02447 781 aa25■■□□□ 1.59
SF1-221ENST00000633899 MOGSQ13724 837 aa25■■□□□ 1.59
SF1-221ENST00000633899 ZMYM1Q5SVZ6 1142 aa25■■□□□ 1.59
SF1-221ENST00000633899 RILPL2Q969X0 211 aa25■■□□□ 1.59
SF1-221ENST00000633899 ERO1AQ96HE7 468 aa25■■□□□ 1.59
SF1-221ENST00000633899 WDR18Q9BV38 432 aa25■■□□□ 1.59
SF1-221ENST00000633899 MCOLN1Q9GZU1 580 aa25■■□□□ 1.59
SF1-221ENST00000633899 MPHOSPH10O00566 681 aaKnown RBP24.99■■□□□ 1.59
SF1-221ENST00000633899 TLR2O60603 784 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 TDO2P48775 406 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 HMGCS2P54868 508 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 GABPAQ06546 454 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 RAB3GAP1Q15042 981 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 SHROOM1Q2M3G4 852 aaPredicted RBP24.99■■□□□ 1.59
SF1-221ENST00000633899 C12orf60Q5U649 245 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 GIMAP6Q6P9H5 292 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 SEC62Q99442 399 aaKnown RBP24.99■■□□□ 1.59
SF1-221ENST00000633899 OSBPL3Q9H4L5 887 aa24.99■■□□□ 1.59
SF1-221ENST00000633899 CYP2D7A0A087X1C5 515 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 JAG1P78504 1218 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 EVX2Q03828 476 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 MTMR2Q13614 643 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 GPAT2Q6NUI2 795 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 CTR9Q6PD62 1173 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 PROCA1Q8NCQ7 364 aaPredicted RBP24.98■■□□□ 1.59
SF1-221ENST00000633899 DYNLL2Q96FJ2 89 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 NACAP1Q9BZK3 213 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 TMOD4Q9NZQ9 345 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 AGTPBP1Q9UPW5 1226 aa24.98■■□□□ 1.59
SF1-221ENST00000633899 GSG1L2A8MUP6 293 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 USP17L10C9JJH3 530 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 PABPC4Q13310 644 aaKnown RBP eCLIP24.97■■□□□ 1.59
SF1-221ENST00000633899 IFFO2Q5TF58 517 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 FEZ1Q99689 392 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 PNMA3Q9UL41 463 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 SLC45A1Q9Y2W3 748 aa24.97■■□□□ 1.59
SF1-221ENST00000633899 MINDY4BA8MYZ0 360 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 C19orf81C9J6K1 198 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 BACE1P56817 501 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 TICAM2Q86XR7 235 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 SLC44A5Q8NCS7 719 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 CD99L2Q8TCZ2 262 aa24.96■■□□□ 1.59
SF1-221ENST00000633899 PATL2C9JE40 543 aaKnown RBP24.95■■□□□ 1.58
SF1-221ENST00000633899 KIF22Q14807 665 aa24.95■■□□□ 1.58
SF1-221ENST00000633899 ARHGEF6Q15052 776 aa24.95■■□□□ 1.58
SF1-221ENST00000633899 PKN2Q16513 984 aaKnown RBP24.95■■□□□ 1.58
SF1-221ENST00000633899 SBK1Q52WX2 424 aa24.95■■□□□ 1.58
SF1-221ENST00000633899 SMCR8Q8TEV9 937 aaPredicted RBP24.95■■□□□ 1.58
SF1-221ENST00000633899 ABHD8Q96I13 439 aa24.95■■□□□ 1.58
SF1-221ENST00000633899 HELLSQ9NRZ9 838 aa24.95■■□□□ 1.58
SF1-221ENST00000633899 CAPN15O75808 1086 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 CYP2C8P10632 490 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 CDK8P49336 464 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 SH3D19Q5HYK7 790 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 TREML2Q5T2D2 321 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 C16orf86Q6ZW13 317 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 NAPBQ9H115 298 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 CPA4Q9UI42 421 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 TRIM17Q9Y577 477 aa24.94■■□□□ 1.58
SF1-221ENST00000633899 OSBPP22059 807 aa24.93■■□□□ 1.58
SF1-221ENST00000633899 CCDC129Q6ZRS4 1044 aa24.93■■□□□ 1.58
SF1-221ENST00000633899 IFNL3Q8IZI9 196 aa24.93■■□□□ 1.58
SF1-221ENST00000633899 CCDC17Q96LX7 622 aa24.93■■□□□ 1.58
SF1-221ENST00000633899 EPB41L4AQ9HCS5 686 aaPredicted RBP24.93■■□□□ 1.58
SF1-221ENST00000633899 SEPT2Q15019 361 aa24.92■■□□□ 1.58
SF1-221ENST00000633899 USP17L2Q6R6M4 530 aa24.92■■□□□ 1.58
SF1-221ENST00000633899 TMEM179Q6ZVK1 233 aa24.92■■□□□ 1.58
SF1-221ENST00000633899 EFCC1Q9HA90 598 aa24.92■■□□□ 1.58
SF1-221ENST00000633899 USP14P54578 494 aa24.91■■□□□ 1.58
SF1-221ENST00000633899 ZYXQ15942 572 aaKnown RBP24.91■■□□□ 1.58
SF1-221ENST00000633899 MCMDC2Q4G0Z9 681 aa24.91■■□□□ 1.58
SF1-221ENST00000633899 C17orf99Q6UX52 265 aa24.91■■□□□ 1.58
SF1-221ENST00000633899 STK11IPQ8N1F8 1099 aa24.91■■□□□ 1.58
SF1-221ENST00000633899 MKNK2Q9HBH9 465 aa24.91■■□□□ 1.58
SF1-221ENST00000633899 ZNF287Q9HBT7 754 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms