RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 HERC5Q9UII4 1024 aaKnown RBP17.45■□□□□ 0.38
LIMS4-203ENST00000632758 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
LIMS4-203ENST00000632758 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
LIMS4-203ENST00000632758 AKR1B1P15121 316 aa17.44■□□□□ 0.38
LIMS4-203ENST00000632758 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
LIMS4-203ENST00000632758 Q6ZUG5 572 aa17.44■□□□□ 0.38
LIMS4-203ENST00000632758 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
LIMS4-203ENST00000632758 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
LIMS4-203ENST00000632758 LAMB1P07942 1786 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 SIPA1L1O43166 1804 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 TSPY2A6NKD2 308 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 NMT2O60551 498 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 JAG1P78504 1218 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIMS4-203ENST00000632758 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
LIMS4-203ENST00000632758 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIMS4-203ENST00000632758 GDF11O95390 407 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 TSPY3P0CV98 308 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 TSPY8P0CW00 308 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 AK2P54819 239 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-203ENST00000632758 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 CDCA5Q96FF9 252 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-203ENST00000632758 SENP2Q9HC62 589 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
LIMS4-203ENST00000632758 POLR2AP24928 1970 aaKnown RBP17.42■□□□□ 0.38
LIMS4-203ENST00000632758 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 TRAF5O00463 557 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 PRKG1Q13976 671 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
LIMS4-203ENST00000632758 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 NOL8Q76FK4 1167 aaKnown RBP17.41■□□□□ 0.38
LIMS4-203ENST00000632758 NEDD1Q8NHV4 660 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 SSC5DA1L4H1 1573 aa17.41■□□□□ 0.38
LIMS4-203ENST00000632758 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
LIMS4-203ENST00000632758 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
LIMS4-203ENST00000632758 ZSCAN10Q96SZ4 725 aaPredicted RBP17.4■□□□□ 0.38
LIMS4-203ENST00000632758 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
LIMS4-203ENST00000632758 ST18O60284 1047 aa17.4■□□□□ 0.38
LIMS4-203ENST00000632758 BRF1Q92994 677 aa17.4■□□□□ 0.38
LIMS4-203ENST00000632758 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
LIMS4-203ENST00000632758 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
LIMS4-203ENST00000632758 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
LIMS4-203ENST00000632758 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.38
LIMS4-203ENST00000632758 USP2O75604 605 aaPredicted RBP17.39■□□□□ 0.37
LIMS4-203ENST00000632758 GUCY1A2P33402 732 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 FGD1P98174 961 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 SEC23AQ15436 765 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 CLEC10AQ8IUN9 316 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 ZNF341Q9BYN7 854 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 TNKSO95271 1327 aa17.39■□□□□ 0.37
LIMS4-203ENST00000632758 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 KIF3CO14782 793 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 GH2P01242 217 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 INPP5BP32019 993 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 CAP2P40123 477 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 RCSD1Q6JBY9 416 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 ENAHQ8N8S7 591 aaPredicted RBP17.38■□□□□ 0.37
LIMS4-203ENST00000632758 HOOK2Q96ED9 719 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 LY9Q9HBG7 655 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
LIMS4-203ENST00000632758 ZNF112Q9UJU3 913 aa17.38■□□□□ 0.37
LIMS4-203ENST00000632758 NT5C2P49902 561 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 SEPT2Q15019 361 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 MOB2Q70IA6 237 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 FBXL16Q8N461 479 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 SNX21Q969T3 373 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 KLRG1Q96E93 195 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 CEP95Q96GE4 821 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 BRPF3Q9ULD4 1205 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 TPCN1Q9ULQ1 816 aa17.37■□□□□ 0.37
LIMS4-203ENST00000632758 ANGEL1Q9UNK9 670 aaKnown RBP17.37■□□□□ 0.37
LIMS4-203ENST00000632758 ERICH2A1L162 156 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 YY1P25490 414 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 WTAPQ15007 396 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 ZKSCAN4Q969J2 545 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-203ENST00000632758 WRNIP1Q96S55 665 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 MTMR4Q9NYA4 1195 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-203ENST00000632758 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
LIMS4-203ENST00000632758 LIFRP42702 1097 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
LIMS4-203ENST00000632758 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 TMEM179Q6ZVK1 233 aa17.36■□□□□ 0.37
LIMS4-203ENST00000632758 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-203ENST00000632758 SIAH1Q8IUQ4 282 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms