RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 SNAP23O00161 211 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 PRKAB2O43741 272 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 CYP7A1P22680 504 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 KCNJ6P48051 423 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 PPARAQ07869 468 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 NCAPHQ15003 741 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 PTPN14Q15678 1187 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 RILPL1Q5EBL4 403 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 KRBA2Q6ZNG9 492 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 DIS3L2Q8IYB7 885 aaKnown RBP9.28□□□□□ -0.92
GPC3-204ENST00000631057 ZNF654Q8IZM8 581 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 ANKRD7Q92527 254 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 TSC1Q92574 1164 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 KCNH3Q9ULD8 1083 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 CEP131Q9UPN4 1083 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
GPC3-204ENST00000631057 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.937e-7■□□□□ 10.7
GPC3-204ENST00000631057 FANCCQ00597 558 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 MYL5Q02045 173 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 ITPK1Q13572 414 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 CLEC4GQ6UXB4 293 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 ANKRD18AQ8IVF6 992 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 CCAR2Q8N163 923 aaKnown RBP9.27□□□□□ -0.93
GPC3-204ENST00000631057 CRACR2BQ8N4Y2 399 aaPredicted RBP9.27□□□□□ -0.93
GPC3-204ENST00000631057 MIGA1Q8NAN2 632 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 FANCBQ8NB91 859 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 CNNM3Q8NE01 707 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 ESR2Q92731 530 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 CLIC6Q96NY7 704 aa9.27□□□□□ -0.93
GPC3-204ENST00000631057 MORC2Q9Y6X9 1032 aaPredicted RBP9.27□□□□□ -0.93
GPC3-204ENST00000631057 KIAA1551Q9HCM1 1747 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 CCP110O43303 1012 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 TUBB4AP04350 444 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 XBP1P17861 261 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 PTPREP23469 700 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 PNOCQ13519 176 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 SF3B3Q15393 1217 aaKnown RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 METTL16Q86W50 562 aaKnown RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 MARCH10Q8NA82 808 aaPredicted RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 ZNF579Q8NAF0 562 aaKnown RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 RNF26Q9BY78 433 aaPredicted RBP9.26□□□□□ -0.93
GPC3-204ENST00000631057 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 COL24A1Q17RW2 1714 aa9.26□□□□□ -0.93
GPC3-204ENST00000631057 SPATA31A5Q5VU36 1347 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 SPATA31A7Q8IWB4 1347 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 BAZ2BQ9UIF8 2168 aaKnown RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 PSDA5PKW4 1024 aaPredicted RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 GUCY1A2P33402 732 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 TOB1P50616 345 aaPredicted RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 SEC23AQ15436 765 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 STK11IPQ8N1F8 1099 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 KIF18AQ8NI77 898 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 NUP133Q8WUM0 1156 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 CCDC34Q96HJ3 373 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 BRIP1Q9BX63 1249 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 BSDC1Q9NW68 430 aaPredicted RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 ABCF2Q9UG63 623 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 FBXO2Q9UK22 296 aaPredicted RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 KCNJ14Q9UNX9 436 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 COL4A1P02462 1669 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 TNKSO95271 1327 aa9.25□□□□□ -0.93
GPC3-204ENST00000631057 PDS5AQ29RF7 1337 aaKnown RBP9.25□□□□□ -0.93
GPC3-204ENST00000631057 USP27XA6NNY8 438 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 MINDY4BA8MYZ0 360 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 BMP15O95972 392 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 SERPINC1P01008 464 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 CALM1P0DP23 149 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 CALM2P0DP24 149 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 CALM3P0DP25 149 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 HSPA1LP34931 641 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 UBASH3AP57075 661 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 POSTNQ15063 836 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 LONRF3Q496Y0 759 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 ARMCX5Q6P1M9 558 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 CATIPQ7Z7H3 387 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 TRIML1Q8N9V2 468 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 ZNF592Q92610 1267 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 RBM28Q9NW13 759 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 PCDHA5Q9Y5H7 936 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 SRPRBQ9Y5M8 271 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 COL1A1P02452 1464 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 UBE2Q2LH0YL09 131 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 DDAH1O94760 285 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms