RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CSRNP1Q96S65 589 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 MRGBPQ9NV56 204 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 IKBKGQ9Y6K9 419 aa5.71□□□□□ -1.49
SDCBP-213ENST00000630925 EPRSP07814 1512 aaKnown RBP5.71□□□□□ -1.49
SDCBP-213ENST00000630925 PLB1Q6P1J6 1458 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 HTATSF1O43719 755 aaKnown RBP5.71□□□□□ -1.5
SDCBP-213ENST00000630925 NAP1L1P55209 391 aaKnown RBP5.71□□□□□ -1.5
SDCBP-213ENST00000630925 CALD1Q05682 793 aaKnown RBP5.71□□□□□ -1.5
SDCBP-213ENST00000630925 ITKQ08881 620 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 PRKG2Q13237 762 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM29Q14134 588 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 PTPN14Q15678 1187 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 POTEEQ6S8J3 1075 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 UNC5DQ6UXZ4 953 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 SPATC1Q76KD6 591 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 MCM10Q7L590 875 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 LSMEM1Q8N8F7 131 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 NAXEQ8NCW5 288 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 PARD3BQ8TEW8 1205 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 RNF166Q96A37 237 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-213ENST00000630925 OSBPL7Q9BZF2 842 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 NLRC4Q9NPP4 1024 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 SEL1LQ9UBV2 794 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 TPCN1Q9ULQ1 816 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 DMTF1Q9Y222 760 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 FAM50BQ9Y247 325 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 TTLL3Q9Y4R7 772 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 AFG3L2Q9Y4W6 797 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 KIAA0586Q9BVV6 1533 aa5.71□□□□□ -1.5
SDCBP-213ENST00000630925 ERICH4A6NGS2 130 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PLOD3O60568 738 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 ECEL1O95672 775 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 GALNSP34059 522 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 KIAA2012Q0VF49 1180 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 GRM3Q14832 879 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 TNNI3KQ59H18 835 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 SPOCD1Q6ZMY3 1216 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 TBC1D1Q86TI0 1168 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 FAM26EQ8N5C1 309 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 RNF217Q8TC41 542 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 ZMAT2Q96NC0 199 aaKnown RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 SLC5A4Q9NY91 659 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 STAP2Q9UGK3 403 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PFDN2Q9UHV9 154 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 MAPRE3Q9UPY8 281 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PCDHGA11Q9Y5H2 935 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 SNCAIPQ9Y6H5 919 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 RIMS1Q86UR5 1692 aaKnown RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 H0Y3Z8 333 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 GABRDO14764 452 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 CPLX1O14810 134 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PMM2O15305 246 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 ATF7P17544 494 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 DPY19L2Q6NUT2 758 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 CYP26C1Q6V0L0 522 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 OTUD6AQ7L8S5 288 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 POF1BQ8WVV4 589 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 GIMAP1Q8WWP7 306 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 BAP1Q92560 729 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 JPH4Q96JJ6 628 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 FBRSQ9HAH7 460 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 DDX21Q9NR30 783 aaKnown RBP eCLIP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 SUN2Q9UH99 717 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 PA2G4Q9UQ80 394 aaKnown RBP5.7□□□□□ -1.5
SDCBP-213ENST00000630925 HCN4Q9Y3Q4 1203 aa5.7□□□□□ -1.5
SDCBP-213ENST00000630925 GPRASP1Q5JY77 1395 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 TPPPO94811 219 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM37O94972 964 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 MBD4O95243 580 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 CCDC159P0C7I6 412 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 PABPC4Q13310 644 aaKnown RBP eCLIP5.69□□□□□ -1.55e-7■■■□□ 16
SDCBP-213ENST00000630925 PPP2R5CQ13362 524 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ORC1Q13415 861 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 COL9A2Q14055 689 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 CBX2Q14781 532 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ATP13A4Q4VNC1 1196 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 SH3RF1Q7Z6J0 888 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 DZIP3Q86Y13 1208 aaKnown RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 AFAP1L1Q8TED9 768 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 TAF4BQ92750 862 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 N4BP2L2Q92802 583 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 POLR3CQ9BUI4 534 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 DBNDD1Q9H9R9 158 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 PLEKHA5Q9HAU0 1116 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ZCCHC17Q9NP64 241 aaKnown RBP5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ANKEF1Q9NU02 776 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 HOXC10Q9NYD6 342 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ARHGAP28Q9P2N2 729 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 FKBPLQ9UIM3 349 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 TNKSO95271 1327 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 ABCC2Q92887 1545 aa5.69□□□□□ -1.5
SDCBP-213ENST00000630925 YEATS2Q9ULM3 1422 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 F5H423 210 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 GFPT2O94808 682 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 IFIT1P09914 478 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 HOXD12P35452 270 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 GCGRP47871 477 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms