RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 LLPHQ9BRT6 129 aaKnown RBP5.2□□□□□ -1.58
CHD2-220ENST00000630813 ARMT1Q9H993 441 aa5.2□□□□□ -1.58
CHD2-220ENST00000630813 NARFQ9UHQ1 456 aa5.2□□□□□ -1.58
CHD2-220ENST00000630813 USP21Q9UK80 565 aa5.2□□□□□ -1.58
CHD2-220ENST00000630813 MINPP1Q9UNW1 487 aa5.2□□□□□ -1.58
CHD2-220ENST00000630813 PTPDC1A2A3K4 754 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 PATL2C9JE40 543 aaKnown RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 RNF225M0QZC1 329 aaPredicted RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 SH2B2O14492 632 aaPredicted RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 IDH1O75874 414 aaKnown RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 MBD4O95243 580 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 HMGB1P09429 215 aaKnown RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 UQCRFS1P1P0C7P4 283 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 VSIG8P0DPA2 414 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 SLC5A1P13866 664 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 CDC27P30260 824 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 HSPA1LP34931 641 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 MLLT3P42568 568 aaPredicted RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 NASPP49321 788 aaPredicted RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 SKOR1P84550 965 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 CTDSPL2Q05D32 466 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 NTRK3Q16288 839 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 CCDC152Q4G0S7 254 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 TPRNQ4KMQ1 711 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 GIMAP6Q6P9H5 292 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 RNF19BQ6ZMZ0 732 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 TXNRD3Q86VQ6 643 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 RNF214Q8ND24 703 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 SHISA4Q96DD7 197 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 ZFP42Q96MM3 310 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 AIFM3Q96NN9 605 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 RCOR1Q9UKL0 485 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 IQSEC3Q9UPP2 1182 aaPredicted RBP5.19□□□□□ -1.58
CHD2-220ENST00000630813 ELP1O95163 1332 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 MYH15Q9Y2K3 1946 aa5.19□□□□□ -1.58
CHD2-220ENST00000630813 TIAM2Q8IVF5 1701 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 CYP2D7A0A087X1C5 515 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 KLF18A0A0U1RQI7 1052 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 B4E1Z4 1266 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 KIF28PB7ZC32 967 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 GNPATO15228 680 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 RANBP6O60518 1105 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 MMP16P51512 607 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 WNT7BP56706 349 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 DYNLL1P63167 89 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 GUCY1B3Q02153 619 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 NFIXQ14938 502 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 TTF1Q15361 905 aaPredicted RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 GRIK5Q16478 980 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 IMMTQ16891 758 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 CCDC183Q5T5S1 534 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 NAA16Q6N069 864 aaPredicted RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 GPAT2Q6NUI2 795 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 RBM43Q6ZSC3 357 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 IFNL3Q8IZI9 196 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 GJD4Q96KN9 370 aaPredicted RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 USP28Q96RU2 1077 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 MPHOSPH8Q99549 860 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 RIOK1Q9BRS2 568 aaKnown RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 TSPY26PQ9H489 355 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 GOLPH3LQ9H4A5 285 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 LY9Q9HBG7 655 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 BSDC1Q9NW68 430 aaPredicted RBP5.18□□□□□ -1.58
CHD2-220ENST00000630813 CTNNA3Q9UI47 895 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 ZMYM6O95789 1325 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 SPATA31A6Q5VVP1 1343 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 PNPLA7Q6ZV29 1317 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 WDR19Q8NEZ3 1342 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 ECM29Q5VYK3 1845 aa5.18□□□□□ -1.58
CHD2-220ENST00000630813 CARMIL3Q8ND23 1372 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 ZNF213O14771 459 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 RXRAP19793 462 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 PDCP20941 246 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 MCM5P33992 734 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 IGHMBP2P38935 993 aaKnown RBP5.17□□□□□ -1.58
CHD2-220ENST00000630813 RPS8P62241 208 aaKnown RBP5.17□□□□□ -1.58
CHD2-220ENST00000630813 CCDC173Q0VFZ6 552 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 UBE4AQ14139 1066 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 FAM196AQ6ZSG2 479 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 ANKRD18AQ8IVF6 992 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 MIGA1Q8NAN2 632 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 ENGASEQ8NFI3 743 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 NCOA7Q8NI08 942 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 MYL10Q9BUA6 226 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.17□□□□□ -1.581e-6■□□□□ 10.8
CHD2-220ENST00000630813 TFCP2L1Q9NZI6 479 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 ZSWIM5Q9P217 1185 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 CCNL1Q9UK58 526 aaPredicted RBP5.17□□□□□ -1.58
CHD2-220ENST00000630813 WASF2Q9Y6W5 498 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 AFF2P51816 1311 aa5.17□□□□□ -1.58
CHD2-220ENST00000630813 UBR3Q6ZT12 1888 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 A0A087WWV3 80 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 GOLGA8BA8MQT2 603 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 ESPNB1AK53 854 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 FGRP09769 529 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 CYP2D6P10635 497 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 CYP7A1P22680 504 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 GUCY1A2P33402 732 aa5.16□□□□□ -1.58
CHD2-220ENST00000630813 KRT85P78386 507 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms