RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 EVX2Q03828 476 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 SH3D19Q5HYK7 790 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 TSHZ3Q63HK5 1081 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
CHD2-217ENST00000629136 RLFQ13129 1914 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
CHD2-217ENST00000629136 MTMR2Q13614 643 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 KIF22Q14807 665 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 TRIM47Q96LD4 638 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 WDR18Q9BV38 432 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 CRNKL1Q9BZJ0 848 aaKnown RBP13.04□□□□□ -0.32
CHD2-217ENST00000629136 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 DCP1AQ9NPI6 582 aaPredicted RBP13.04□□□□□ -0.32
CHD2-217ENST00000629136 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
CHD2-217ENST00000629136 MBD4O95243 580 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 SHMT1P34896 483 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 PSMC4P43686 418 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 GABPAQ06546 454 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.325e-19■□□□□ 8.8
CHD2-217ENST00000629136 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
CHD2-217ENST00000629136 MKI67P46013 3256 aaKnown RBP13.02□□□□□ -0.32
CHD2-217ENST00000629136 PRKAB2O43741 272 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 GNRH1P01148 92 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 GH2P01242 217 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 OSBPP22059 807 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 BACE1P56817 501 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 UBE3CQ15386 1083 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
CHD2-217ENST00000629136 ZNF333Q96JL9 665 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
CHD2-217ENST00000629136 MCM9Q9NXL9 1143 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 SALL3Q9BXA9 1300 aa13.02□□□□□ -0.33
CHD2-217ENST00000629136 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
CHD2-217ENST00000629136 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
CHD2-217ENST00000629136 CYP2D6P10635 497 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 OTUD7AQ8TE49 926 aaPredicted RBP13.01□□□□□ -0.33
CHD2-217ENST00000629136 GPATCH3Q96I76 525 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
CHD2-217ENST00000629136 SRRDQ9UH36 339 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
CHD2-217ENST00000629136 MYPNQ86TC9 1320 aa13□□□□□ -0.33
CHD2-217ENST00000629136 POTEFA5A3E0 1075 aa13□□□□□ -0.33
CHD2-217ENST00000629136 SMIM22K7EJ46 135 aa13□□□□□ -0.33
CHD2-217ENST00000629136 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
CHD2-217ENST00000629136 PRMT2P55345 433 aa13□□□□□ -0.33
CHD2-217ENST00000629136 FAM110CQ1W6H9 321 aa13□□□□□ -0.33
CHD2-217ENST00000629136 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
CHD2-217ENST00000629136 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
CHD2-217ENST00000629136 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
CHD2-217ENST00000629136 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
CHD2-217ENST00000629136 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
CHD2-217ENST00000629136 FRMPD3Q5JV73 1810 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 KIAA0100Q14667 2235 aaKnown RBP12.99□□□□□ -0.33
CHD2-217ENST00000629136 C19orf81C9J6K1 198 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 FCGRTP55899 365 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 PRKCZQ05513 592 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHD2-217ENST00000629136 ABCB5Q2M3G0 1257 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 SLC44A5Q8NCS7 719 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 C12orf42Q96LP6 360 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
CHD2-217ENST00000629136 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 MX1P20591 662 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
CHD2-217ENST00000629136 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
CHD2-217ENST00000629136 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
CHD2-217ENST00000629136 OSBP2Q969R2 916 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 TMOD4Q9NZQ9 345 aa12.98□□□□□ -0.33
CHD2-217ENST00000629136 HOXD10P28358 340 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 GCLCP48506 637 aaPredicted RBP12.97□□□□□ -0.33
CHD2-217ENST00000629136 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
CHD2-217ENST00000629136 SEPT2Q15019 361 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 APPBP2Q92624 585 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 CABP5Q9NP86 173 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 MORF4L1Q9UBU8 362 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
CHD2-217ENST00000629136 PDE4DIPQ5VU43 2346 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms