RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 FSTL1Q12841 308 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 SUPT20HL1Q3ZLR7 823 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 KCNB2Q92953 911 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 PCP11498 1178 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 NT5C2P49902 561 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 TRPM7Q96QT4 1865 aa11.71□□□□□ -0.53
SOX2-OT-249ENST00000628810 GREB1LQ9C091 1923 aaPredicted RBP11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 MINDY4BA8MYZ0 360 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 SMIM22K7EJ46 135 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 TRAF5O00463 557 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 ZNF213O14771 459 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 CYP21A2P08686 494 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 SHMT1P34896 483 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 HSPA4P34932 840 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 NF2P35240 595 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 PRAMEF18Q5VWM3 479 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 CREB3L3Q68CJ9 461 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 DLK2Q6UY11 383 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 TBC1D10CQ8IV04 446 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 IL17RAQ96F46 866 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
SOX2-OT-249ENST00000628810 PLIN4Q96Q06 1357 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 SLC27A2O14975 620 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 ORC4O43929 436 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 FKBP1BP68106 108 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 SLC4A8Q2Y0W8 1093 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 ZNF287Q9HBT7 754 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
SOX2-OT-249ENST00000628810 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 CDK8P49336 464 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 HAND2P61296 217 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 PDE4BQ07343 736 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 AKNAD1Q5T1N1 836 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 KLRG1Q96E93 195 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 DYNLL2Q96FJ2 89 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 ZNF341Q9BYN7 854 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 RNF41Q9H4P4 317 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 TAF6LQ9Y6J9 622 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 MYH8P13535 1937 aa11.68□□□□□ -0.54
SOX2-OT-249ENST00000628810 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 NEDD4P46934 1319 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 FAM196BA6NMK8 535 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 PPP1R12BO60237 982 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 RASA1P20936 1047 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 MCCP23508 829 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 ANAPC15P60006 121 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 NOL9Q5SY16 702 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 CST9Q5W186 159 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 STOX1Q6ZVD7 989 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
SOX2-OT-249ENST00000628810 E7EWF7 191 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 STK25O00506 426 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 CELF2O95319 508 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 ZKSCAN1P17029 563 aaPredicted RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 IREB2P48200 963 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 LDLRAD1Q5T700 205 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 MFSD6Q6ZSS7 791 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 WRNIP1Q96S55 665 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms