RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 E7EWF7 191 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 NASPP49321 788 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 PPP4R3BQ5MIZ7 849 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 TMEM39BQ9GZU3 492 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 ARHGEF10LQ9HCE6 1279 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 TNS1Q9HBL0 1735 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 ABCB5Q2M3G0 1257 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 COL5A3P25940 1745 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 XBP1P17861 261 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 RXRAP19793 462 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 NFIAQ12857 509 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 SLC44A5Q8NCS7 719 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 WNT10BO00744 389 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 SYT1P21579 422 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 LRSAM1Q6UWE0 723 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 ZDHHC15Q96MV8 337 aa14.47□□□□□ -0.09
SYNGAP1-207ENST00000628646 GSG1L2A8MUP6 293 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 SAFBQ15424 915 aaKnown RBP eCLIP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 TSGA10IPQ3SY00 556 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 FOXP4Q8IVH2 680 aaPredicted RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 DDX60Q8IY21 1712 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 CYP21A2P08686 494 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 ZRSR1Q15695 479 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 ME3Q16798 604 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 TMTC2Q8N394 836 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 C2orf69Q8N8R5 385 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 ZBTB43O43298 467 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 KIF5BP33176 963 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 ADGRA1Q86SQ6 560 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 ALDH8A1Q9H2A2 487 aaPredicted RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 SH2D4AQ9H788 454 aa14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-207ENST00000628646 SHTN1A0MZ66 631 aa14.46□□□□□ -0.1
SYNGAP1-207ENST00000628646 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.1
SYNGAP1-207ENST00000628646 TMOD4Q9NZQ9 345 aa14.46□□□□□ -0.1
SYNGAP1-207ENST00000628646 TPCN1Q9ULQ1 816 aa14.46□□□□□ -0.1
SYNGAP1-207ENST00000628646 DTNBO60941 627 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 OSBPL5Q9H0X9 879 aaPredicted RBP14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 GDPD2Q9HCC8 539 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 FLT1P17948 1338 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 CCDC173Q0VFZ6 552 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 SALL1Q9NSC2 1324 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 CDKL5O76039 1030 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 ZSCAN22P10073 491 aaPredicted RBP14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 ICA1Q05084 483 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
SYNGAP1-207ENST00000628646 ESPNB1AK53 854 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 ATP2B1P20020 1258 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 CDK8P49336 464 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 PDS5AQ29RF7 1337 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 SYCE3A1L190 88 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 INCENPQ9NQS7 918 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 SWAP70Q9UH65 585 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 MTMR6Q9Y217 621 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 SPEF2Q9C093 1822 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 TOB2Q14106 344 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 SLC10A4Q96EP9 437 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 CCDC17Q96LX7 622 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 TANGO6Q9C0B7 1094 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 CTR9Q6PD62 1173 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 LRRC47Q8N1G4 583 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 FAM151AQ8WW52 585 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
SYNGAP1-207ENST00000628646 LTBP3Q9NS15 1303 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 STX6O43752 255 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 PLS1Q14651 629 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 TICAM2Q86XR7 235 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 NECAB1Q8N987 351 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 ENTPD3O75355 529 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 GH2P01242 217 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 PPP4CP60510 307 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 GLIS2Q9BZE0 524 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 IGSF3O75054 1194 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 RTN1Q16799 776 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 GIMAP6Q6P9H5 292 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 MYL10Q9BUA6 226 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 ZNF341Q9BYN7 854 aa14.43□□□□□ -0.1
SYNGAP1-207ENST00000628646 FZD9O00144 591 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 SLC1A4P43007 532 aa14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 FKBP1AP62942 108 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-207ENST00000628646 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms