RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ATP5JP18859 108 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 BACE1P56817 501 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 SHROOM1Q2M3G4 852 aaPredicted RBP14.69□□□□□ -0.06
UBR1-212ENST00000627960 TTC6Q86TZ1 520 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 RAET1EQ8TD07 263 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 EHD4Q9H223 541 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 ZBTB21Q9ULJ3 1066 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
UBR1-212ENST00000627960 ZNF532Q9HCE3 1301 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 TCRBV5S4A2TA0A5A2 114 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 C19orf81C9J6K1 198 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 USP17L10C9JJH3 530 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 MYCP01106 439 aaPredicted RBP14.68□□□□□ -0.06
UBR1-212ENST00000627960 GRK4P32298 578 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 GCLCP48506 637 aaPredicted RBP14.68□□□□□ -0.06
UBR1-212ENST00000627960 PRKCZQ05513 592 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 MTMR2Q13614 643 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 TATDN1Q6P1N9 297 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 EDC3Q96F86 508 aaKnown RBP14.68□□□□□ -0.06
UBR1-212ENST00000627960 LRRCC1Q9C099 1032 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 ASCC2Q9H1I8 757 aaPredicted RBP14.68□□□□□ -0.06
UBR1-212ENST00000627960 BOLA2Q9H3K6 86 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 TMOD4Q9NZQ9 345 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 SERPINB13Q9UIV8 391 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
UBR1-212ENST00000627960 DDX60LQ5H9U9 1706 aaKnown RBP14.68□□□□□ -0.06
UBR1-212ENST00000627960 PLCD1P51178 756 aa14.67□□□□□ -0.06
UBR1-212ENST00000627960 FAM110CQ1W6H9 321 aa14.67□□□□□ -0.06
UBR1-212ENST00000627960 PRPF38BQ5VTL8 546 aaKnown RBP14.67□□□□□ -0.06
UBR1-212ENST00000627960 CRNKL1Q9BZJ0 848 aaKnown RBP14.67□□□□□ -0.06
UBR1-212ENST00000627960 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
UBR1-212ENST00000627960 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
UBR1-212ENST00000627960 GH2P01242 217 aa14.66□□□□□ -0.06
UBR1-212ENST00000627960 HOXA7P31268 230 aaPredicted RBP14.66□□□□□ -0.06
UBR1-212ENST00000627960 MTFR1Q15390 333 aa14.66□□□□□ -0.06
UBR1-212ENST00000627960 HAUS7Q99871 368 aa14.66□□□□□ -0.06
UBR1-212ENST00000627960 DCTPP1Q9H773 170 aa14.66□□□□□ -0.06
UBR1-212ENST00000627960 POLR3DP05423 398 aaPredicted RBP14.65□□□□□ -0.06
UBR1-212ENST00000627960 SHMT1P34896 483 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 ADD2P35612 726 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 FLT3LGP49771 235 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
UBR1-212ENST00000627960 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 COA7Q96BR5 231 aa14.65□□□□□ -0.06
UBR1-212ENST00000627960 MYH8P13535 1937 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
UBR1-212ENST00000627960 UBXN2AP68543 259 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
UBR1-212ENST00000627960 GABPAQ06546 454 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 IRF5Q13568 498 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 ABCB5Q2M3G0 1257 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 SLFNL1Q499Z3 407 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 PXYLP1Q8TE99 480 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 P2RX7Q99572 595 aaKnown RBP14.64□□□□□ -0.07
UBR1-212ENST00000627960 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.64□□□□□ -0.07
UBR1-212ENST00000627960 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 DCP1AQ9NPI6 582 aaPredicted RBP14.64□□□□□ -0.07
UBR1-212ENST00000627960 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 MCM9Q9NXL9 1143 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 MORF4L1Q9UBU8 362 aa14.64□□□□□ -0.07
UBR1-212ENST00000627960 BIN2Q9UBW5 565 aaPredicted RBP14.64□□□□□ -0.07
UBR1-212ENST00000627960 ADCY3O60266 1144 aa14.63□□□□□ -0.07
UBR1-212ENST00000627960 CCL5P13501 91 aa14.63□□□□□ -0.07
UBR1-212ENST00000627960 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
UBR1-212ENST00000627960 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
UBR1-212ENST00000627960 ECHDC1Q9NTX5 307 aa14.63□□□□□ -0.07
UBR1-212ENST00000627960 PLXNB2O15031 1838 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 MBD4O95243 580 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 ELNP15502 786 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 GUCY1A2P33402 732 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 HERVK_113P62684 666 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 RAB3GAP1Q15042 981 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 C12orf42Q96LP6 360 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 BRCA2P51587 3418 aa14.62□□□□□ -0.07
UBR1-212ENST00000627960 PRKAB2O43741 272 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 CHGBP05060 677 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 GJB1P08034 283 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 CYP2D6P10635 497 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 USP14P54578 494 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 EVX2Q03828 476 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 GPRC5AQ8NFJ5 357 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 ACER1Q8TDN7 264 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 FEZ1Q99689 392 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 ATP8A2Q9NTI2 1148 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 RBPJLQ9UBG7 517 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
UBR1-212ENST00000627960 MKI67P46013 3256 aaKnown RBP14.61□□□□□ -0.07
UBR1-212ENST00000627960 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms