RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TDO2P48775 406 aa17.59■□□□□ 0.41
PNKP-221ENST00000627317 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
PNKP-221ENST00000627317 ZNF589Q86UQ0 364 aaPredicted RBP17.59■□□□□ 0.41
PNKP-221ENST00000627317 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
PNKP-221ENST00000627317 NACAP1Q9BZK3 213 aa17.59■□□□□ 0.41
PNKP-221ENST00000627317 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
PNKP-221ENST00000627317 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
PNKP-221ENST00000627317 DOCK1Q14185 1865 aa17.58■□□□□ 0.41
PNKP-221ENST00000627317 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 FKTNO75072 461 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.4
PNKP-221ENST00000627317 CAP1Q01518 475 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 OTUD7BQ6GQQ9 843 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
PNKP-221ENST00000627317 BAZ2AQ9UIF9 1905 aaKnown RBP17.57■□□□□ 0.4
PNKP-221ENST00000627317 GSG1L2A8MUP6 293 aa17.57■□□□□ 0.4
PNKP-221ENST00000627317 PATL2C9JE40 543 aaKnown RBP17.57■□□□□ 0.4
PNKP-221ENST00000627317 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
PNKP-221ENST00000627317 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
PNKP-221ENST00000627317 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.57■□□□□ 0.4
PNKP-221ENST00000627317 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
PNKP-221ENST00000627317 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
PNKP-221ENST00000627317 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 TTC6Q86TZ1 520 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
PNKP-221ENST00000627317 NAPBQ9H115 298 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.4
PNKP-221ENST00000627317 PICK1Q9NRD5 415 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 PI4KBQ9UBF8 816 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
PNKP-221ENST00000627317 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
PNKP-221ENST00000627317 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
PNKP-221ENST00000627317 CXCL11O14625 94 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 VPS53Q5VIR6 699 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 GPAT2Q6NUI2 795 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
PNKP-221ENST00000627317 ANKRD23Q86SG2 305 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 ZHX2Q9Y6X8 837 aa17.55■□□□□ 0.4
PNKP-221ENST00000627317 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 USP17L21D6R901 530 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 SGSM2O43147 1006 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 CYP2D6P10635 497 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 HSPD1P10809 573 aaKnown RBP17.54■□□□□ 0.4
PNKP-221ENST00000627317 CAP2P40123 477 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 JAG1P78504 1218 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
PNKP-221ENST00000627317 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
PNKP-221ENST00000627317 ESYT1Q9BSJ8 1104 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 IL25Q9H293 177 aa17.54■□□□□ 0.4
PNKP-221ENST00000627317 CYP2D7A0A087X1C5 515 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 FOXP2O15409 715 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 PKN2Q16513 984 aaKnown RBP17.53■□□□□ 0.4
PNKP-221ENST00000627317 CTR9Q6PD62 1173 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 EHD4Q9H223 541 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 ZFYVE28Q9HCC9 887 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
PNKP-221ENST00000627317 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 TLR2O60603 784 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 PLCD1P51178 756 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 ALX1Q15699 326 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 SHROOM1Q2M3G4 852 aaPredicted RBP17.52■□□□□ 0.4
PNKP-221ENST00000627317 SBK1Q52WX2 424 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 C12orf60Q5U649 245 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 OTOP1Q7RTM1 612 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
PNKP-221ENST00000627317 DSCC1Q9BVC3 393 aa17.52■□□□□ 0.4
PNKP-221ENST00000627317 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 PTPRFP10586 1907 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 PDHXO00330 501 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 SP3Q02447 781 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 HPS5Q9UPZ3 1129 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 LOC285556D6RIA3 1793 aa17.51■□□□□ 0.39
PNKP-221ENST00000627317 TRIM75PA6NK02 468 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 FGAP02671 866 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 EVX2Q03828 476 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 TATDN1Q6P1N9 297 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 FBXO46Q6PJ61 603 aaPredicted RBP17.5■□□□□ 0.39
PNKP-221ENST00000627317 C17orf99Q6UX52 265 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 SWAP70Q9UH65 585 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 CENPFP49454 3210 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 ROBO3Q96MS0 1386 aa17.5■□□□□ 0.39
PNKP-221ENST00000627317 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
PNKP-221ENST00000627317 PPARAQ07869 468 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
PNKP-221ENST00000627317 CCDC85CA6NKD9 419 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 GABPAQ06546 454 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 FASTKD5Q7L8L6 764 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms