RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 USP17L21D6R901 530 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 GABPAQ06546 454 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 MOGSQ13724 837 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 CABP5Q9NP86 173 aa20.09■□□□□ 0.81
UBE3D-208ENST00000626828 GSG1L2A8MUP6 293 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 PATL2C9JE40 543 aaKnown RBP20.08■□□□□ 0.81
UBE3D-208ENST00000626828 PDHXO00330 501 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 GPAA1O43292 621 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 GDF11O95390 407 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 C12orf60Q5U649 245 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 CCDC84Q86UT8 332 aaPredicted RBP20.08■□□□□ 0.81
UBE3D-208ENST00000626828 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.08■□□□□ 0.81
UBE3D-208ENST00000626828 SWAP70Q9UH65 585 aa20.08■□□□□ 0.81
UBE3D-208ENST00000626828 CYP2D6P10635 497 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 JAG1P78504 1218 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 ABCB5Q2M3G0 1257 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 GADL1Q6ZQY3 521 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 ZBTB21Q9ULJ3 1066 aa20.07■□□□□ 0.8
UBE3D-208ENST00000626828 BAZ2AQ9UIF9 1905 aaKnown RBP20.06■□□□□ 0.8
UBE3D-208ENST00000626828 C19orf81C9J6K1 198 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 M0R2C6 588 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 TLR2O60603 784 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 GH2P01242 217 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 APPP05067 770 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SHMT1P34896 483 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SP3Q02447 781 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 DGKZQ13574 1117 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SH3D19Q5HYK7 790 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 CTU1Q7Z7A3 348 aaKnown RBP20.06■□□□□ 0.8
UBE3D-208ENST00000626828 PROCA1Q8NCQ7 364 aaPredicted RBP20.06■□□□□ 0.8
UBE3D-208ENST00000626828 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SEC62Q99442 399 aaKnown RBP20.06■□□□□ 0.8
UBE3D-208ENST00000626828 SLC45A1Q9Y2W3 748 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 PHIPQ8WWQ0 1821 aa20.06■□□□□ 0.8
UBE3D-208ENST00000626828 ATAD5Q96QE3 1844 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 USP17L10C9JJH3 530 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 BACE1P56817 501 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 NACAP1Q9BZK3 213 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 HELLSQ9NRZ9 838 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 ARPP21Q9UBL0 812 aaPredicted RBP20.05■□□□□ 0.8
UBE3D-208ENST00000626828 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
UBE3D-208ENST00000626828 ARHGEF6Q15052 776 aa20.04■□□□□ 0.8
UBE3D-208ENST00000626828 PKN2Q16513 984 aaKnown RBP20.04■□□□□ 0.8
UBE3D-208ENST00000626828 DYNLL2Q96FJ2 89 aa20.04■□□□□ 0.8
UBE3D-208ENST00000626828 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
UBE3D-208ENST00000626828 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
UBE3D-208ENST00000626828 CYP2D7A0A087X1C5 515 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 CDK8P49336 464 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 HMGCS2P54868 508 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 EVX2Q03828 476 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBE3D-208ENST00000626828 RAB3GAP1Q15042 981 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 SHROOM1Q2M3G4 852 aaPredicted RBP20.03■□□□□ 0.8
UBE3D-208ENST00000626828 IFFO2Q5TF58 517 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 C16orf86Q6ZW13 317 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 PARK7Q99497 189 aaKnown RBP20.03■□□□□ 0.8
UBE3D-208ENST00000626828 MCOLN1Q9GZU1 580 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 TMOD4Q9NZQ9 345 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 AGTPBP1Q9UPW5 1226 aa20.03■□□□□ 0.8
UBE3D-208ENST00000626828 PTPRFP10586 1907 aa20.02■□□□□ 0.8
UBE3D-208ENST00000626828 MINDY4BA8MYZ0 360 aa20.02■□□□□ 0.8
UBE3D-208ENST00000626828 TDO2P48775 406 aa20.02■□□□□ 0.8
UBE3D-208ENST00000626828 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.8
UBE3D-208ENST00000626828 C17orf99Q6UX52 265 aa20.02■□□□□ 0.8
UBE3D-208ENST00000626828 MPHOSPH10O00566 681 aaKnown RBP20.01■□□□□ 0.79
UBE3D-208ENST00000626828 PDE4AP27815 886 aa20.01■□□□□ 0.79
UBE3D-208ENST00000626828 MTMR2Q13614 643 aa20.01■□□□□ 0.79
UBE3D-208ENST00000626828 SLC44A5Q8NCS7 719 aa20.01■□□□□ 0.79
UBE3D-208ENST00000626828 PNMA3Q9UL41 463 aa20.01■□□□□ 0.79
UBE3D-208ENST00000626828 CYP2C8P10632 490 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 SDSP20132 328 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 OSBPP22059 807 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 KIF22Q14807 665 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 SEPT2Q15019 361 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 USP17L2Q6R6M4 530 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 TMEM179Q6ZVK1 233 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 ZNF287Q9HBT7 754 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 CPA4Q9UI42 421 aa20■□□□□ 0.79
UBE3D-208ENST00000626828 DDX60LQ5H9U9 1706 aaKnown RBP19.99■□□□□ 0.79
UBE3D-208ENST00000626828 SMIM22K7EJ46 135 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 HIP1O00291 1037 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 GUCY1A2P33402 732 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 USP14P54578 494 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 TREML2Q5T2D2 321 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 ABHD8Q96I13 439 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 NAPBQ9H115 298 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 MKNK2Q9HBH9 465 aa19.99■□□□□ 0.79
UBE3D-208ENST00000626828 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
UBE3D-208ENST00000626828 HOXA7P31268 230 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-208ENST00000626828 NMIQ13287 307 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-208ENST00000626828 CCDC129Q6ZRS4 1044 aa19.98■□□□□ 0.79
UBE3D-208ENST00000626828 FEZ1Q99689 392 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms