RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 KIF1BPQ96EK5 621 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 RNF208Q9H0X6 261 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 RCAN3Q9UKA8 241 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 JAG1P78504 1218 aa23.34■■□□□ 1.33
ATG4B-226ENST00000625810 FAM110CQ1W6H9 321 aa23.34■■□□□ 1.33
ATG4B-226ENST00000625810 SH3D19Q5HYK7 790 aa23.34■■□□□ 1.33
ATG4B-226ENST00000625810 METTL16Q86W50 562 aaKnown RBP23.34■■□□□ 1.33
ATG4B-226ENST00000625810 WDR18Q9BV38 432 aa23.34■■□□□ 1.33
ATG4B-226ENST00000625810 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
ATG4B-226ENST00000625810 GDF11O95390 407 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 IFIT2P09913 472 aaKnown RBP23.33■■□□□ 1.33
ATG4B-226ENST00000625810 ELNP15502 786 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 IRF5Q13568 498 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 TTF1Q15361 905 aaPredicted RBP23.33■■□□□ 1.33
ATG4B-226ENST00000625810 TMED8Q6PL24 325 aaPredicted RBP23.33■■□□□ 1.33
ATG4B-226ENST00000625810 UBE2Q1Q7Z7E8 422 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 UNC93B1Q9H1C4 597 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 GINM1Q9NU53 330 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 TMOD4Q9NZQ9 345 aa23.33■■□□□ 1.33
ATG4B-226ENST00000625810 MYH1P12882 1939 aa23.33■■□□□ 1.32
ATG4B-226ENST00000625810 GCLCP48506 637 aaPredicted RBP23.32■■□□□ 1.32
ATG4B-226ENST00000625810 MTMR2Q13614 643 aa23.32■■□□□ 1.32
ATG4B-226ENST00000625810 SHROOM1Q2M3G4 852 aaPredicted RBP23.32■■□□□ 1.32
ATG4B-226ENST00000625810 PXYLP1Q8TE99 480 aa23.32■■□□□ 1.32
ATG4B-226ENST00000625810 COA7Q96BR5 231 aa23.32■■□□□ 1.32
ATG4B-226ENST00000625810 H0YGN5 161 aa23.31■■□□□ 1.32
ATG4B-226ENST00000625810 RAB11FIP3O75154 756 aa23.31■■□□□ 1.32
ATG4B-226ENST00000625810 INHAP05111 366 aa23.31■■□□□ 1.32
ATG4B-226ENST00000625810 BACE1P56817 501 aa23.31■■□□□ 1.32
ATG4B-226ENST00000625810 ASCC2Q9H1I8 757 aaPredicted RBP23.31■■□□□ 1.32
ATG4B-226ENST00000625810 C19orf81C9J6K1 198 aa23.3■■□□□ 1.32
ATG4B-226ENST00000625810 IRX3P78415 501 aaPredicted RBP23.3■■□□□ 1.32
ATG4B-226ENST00000625810 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
ATG4B-226ENST00000625810 SIRT2Q8IXJ6 389 aa23.3■■□□□ 1.32
ATG4B-226ENST00000625810 U2AF1L4Q8WU68 220 aaKnown RBP23.3■■□□□ 1.32
ATG4B-226ENST00000625810 DNAJC2Q99543 621 aaKnown RBP23.3■■□□□ 1.32
ATG4B-226ENST00000625810 TAOK2Q9UL54 1235 aa23.3■■□□□ 1.32
ATG4B-226ENST00000625810 ZBTB21Q9ULJ3 1066 aa23.3■■□□□ 1.32
ATG4B-226ENST00000625810 MAGEB6P1A0A0J9YX57 407 aa23.29■■□□□ 1.32
ATG4B-226ENST00000625810 USP17L10C9JJH3 530 aa23.29■■□□□ 1.32
ATG4B-226ENST00000625810 DOCK3Q8IZD9 2030 aa23.29■■□□□ 1.32
ATG4B-226ENST00000625810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.29■■□□□ 1.32
ATG4B-226ENST00000625810 COLQQ9Y215 455 aaPredicted RBP23.29■■□□□ 1.32
ATG4B-226ENST00000625810 SLC9C2Q5TAH2 1124 aa23.28■■□□□ 1.32
ATG4B-226ENST00000625810 SERPINB13Q9UIV8 391 aa23.28■■□□□ 1.32
ATG4B-226ENST00000625810 GOLIM4O00461 696 aa23.27■■□□□ 1.32
ATG4B-226ENST00000625810 SGPL1O95470 568 aa23.27■■□□□ 1.32
ATG4B-226ENST00000625810 MORF4L1Q9UBU8 362 aa23.27■■□□□ 1.32
ATG4B-226ENST00000625810 GH2P01242 217 aa23.26■■□□□ 1.31
ATG4B-226ENST00000625810 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
ATG4B-226ENST00000625810 PDE6AP16499 860 aa23.26■■□□□ 1.31
ATG4B-226ENST00000625810 RIOK1Q9BRS2 568 aaKnown RBP23.26■■□□□ 1.31
ATG4B-226ENST00000625810 CRNKL1Q9BZJ0 848 aaKnown RBP23.26■■□□□ 1.31
ATG4B-226ENST00000625810 EHD4Q9H223 541 aa23.26■■□□□ 1.31
ATG4B-226ENST00000625810 PAK6Q9NQU5 681 aaPredicted RBP23.26■■□□□ 1.31
ATG4B-226ENST00000625810 FARP2O94887 1054 aaPredicted RBP23.25■■□□□ 1.31
ATG4B-226ENST00000625810 HOXA7P31268 230 aaPredicted RBP23.25■■□□□ 1.31
ATG4B-226ENST00000625810 FXR1P51114 621 aaKnown RBP eCLIP23.25■■□□□ 1.31
ATG4B-226ENST00000625810 TATDN1Q6P1N9 297 aa23.25■■□□□ 1.31
ATG4B-226ENST00000625810 USP17L2Q6R6M4 530 aa23.25■■□□□ 1.31
ATG4B-226ENST00000625810 DPF3Q92784 378 aa23.25■■□□□ 1.31
ATG4B-226ENST00000625810 P2RX7Q99572 595 aaKnown RBP23.25■■□□□ 1.31
ATG4B-226ENST00000625810 GJD2Q9UKL4 321 aa23.25■■□□□ 1.31
ATG4B-226ENST00000625810 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
ATG4B-226ENST00000625810 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
ATG4B-226ENST00000625810 CERKLQ49MI3 558 aaPredicted RBP23.24■■□□□ 1.31
ATG4B-226ENST00000625810 DEFB118Q96PH6 123 aa23.24■■□□□ 1.31
ATG4B-226ENST00000625810 FEZ1Q99689 392 aa23.24■■□□□ 1.31
ATG4B-226ENST00000625810 BOLA2Q9H3K6 86 aa23.24■■□□□ 1.31
ATG4B-226ENST00000625810 CABP5Q9NP86 173 aa23.24■■□□□ 1.31
ATG4B-226ENST00000625810 PEX10O60683 326 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 RAB3GAP1Q15042 981 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 ABCB5Q2M3G0 1257 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 HTATIP2Q9BUP3 242 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 TXNRD2Q9NNW7 524 aa23.23■■□□□ 1.31
ATG4B-226ENST00000625810 TRIOBPQ9H2D6 2365 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 PLXNB2O15031 1838 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 PLCD1P51178 756 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 HERVK_113P62684 666 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
ATG4B-226ENST00000625810 CRISPLD2Q9H0B8 497 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 EMILIN3Q9NT22 766 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 PAG1Q9NWQ8 432 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 MCM9Q9NXL9 1143 aa23.22■■□□□ 1.31
ATG4B-226ENST00000625810 RANBP2P49792 3224 aaKnown RBP23.22■■□□□ 1.31
ATG4B-226ENST00000625810 DDX60LQ5H9U9 1706 aaKnown RBP23.22■■□□□ 1.31
ATG4B-226ENST00000625810 TFRCP02786 760 aaKnown RBP23.21■■□□□ 1.31
ATG4B-226ENST00000625810 HMGCRP04035 888 aa23.21■■□□□ 1.31
ATG4B-226ENST00000625810 ATP5JP18859 108 aa23.21■■□□□ 1.31
ATG4B-226ENST00000625810 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
ATG4B-226ENST00000625810 GPRC5AQ8NFJ5 357 aa23.21■■□□□ 1.31
ATG4B-226ENST00000625810 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.21■■□□□ 1.31
ATG4B-226ENST00000625810 CHRDL2Q6WN34 429 aa23.2■■□□□ 1.3
ATG4B-226ENST00000625810 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
ATG4B-226ENST00000625810 LRRCC1Q9C099 1032 aa23.2■■□□□ 1.3
ATG4B-226ENST00000625810 RBPJLQ9UBG7 517 aa23.2■■□□□ 1.3
ATG4B-226ENST00000625810 NAV1Q8NEY1 1877 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 TCRBV5S4A2TA0A5A2 114 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 CAPN2P17655 700 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms